RNA–Protein interactions for RNA: ENST00000564793.1

CFDP1-204, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-204ENST00000564793 NBPF26B4DH59 902 aa9.24□□□□□ -0.93
CFDP1-204ENST00000564793 CLCN1P35523 988 aa9.24□□□□□ -0.93
CFDP1-204ENST00000564793 IL27Q8NEV9 243 aa9.24□□□□□ -0.93
CFDP1-204ENST00000564793 ZBED2Q9BTP6 218 aa9.24□□□□□ -0.93
CFDP1-204ENST00000564793 FAM117AQ9C073 453 aa9.24□□□□□ -0.93
CFDP1-204ENST00000564793 ARHGAP33O14559 1287 aa9.23□□□□□ -0.93
CFDP1-204ENST00000564793 HS3ST6Q96QI5 342 aa9.23□□□□□ -0.93
CFDP1-204ENST00000564793 TMUB1Q9BVT8 246 aa9.23□□□□□ -0.93
CFDP1-204ENST00000564793 GPCPD1Q9NPB8 672 aa9.23□□□□□ -0.93
CFDP1-204ENST00000564793 PNMA3Q9UL41 463 aa9.23□□□□□ -0.93
CFDP1-204ENST00000564793 DNMBPQ6XZF7 1577 aa9.22□□□□□ -0.93
CFDP1-204ENST00000564793 POTEB3A0JP26 581 aa9.22□□□□□ -0.93
CFDP1-204ENST00000564793 DMRTA1Q5VZB9 504 aa9.22□□□□□ -0.93
CFDP1-204ENST00000564793 POTEBQ6S5H4 581 aa9.22□□□□□ -0.93
CFDP1-204ENST00000564793 NUDT18Q6ZVK8 323 aa9.22□□□□□ -0.93
CFDP1-204ENST00000564793 PACS2Q86VP3 889 aa9.22□□□□□ -0.93
CFDP1-204ENST00000564793 EIF4G3O43432 1585 aaKnown RBP9.21□□□□□ -0.93
CFDP1-204ENST00000564793 SMAPO00193 183 aa9.21□□□□□ -0.94
CFDP1-204ENST00000564793 MS4A1P11836 297 aa9.21□□□□□ -0.94
CFDP1-204ENST00000564793 PBX2P40425 430 aa9.21□□□□□ -0.94
CFDP1-204ENST00000564793 ZNF687Q8N1G0 1237 aa9.21□□□□□ -0.94
CFDP1-204ENST00000564793 TATDN2Q93075 761 aa9.21□□□□□ -0.94
CFDP1-204ENST00000564793 EYA1Q99502 592 aa9.21□□□□□ -0.94
CFDP1-204ENST00000564793 WDR97A6NE52 1622 aa9.2□□□□□ -0.94
CFDP1-204ENST00000564793 TARBP1Q13395 1621 aaKnown RBP9.2□□□□□ -0.94
CFDP1-204ENST00000564793 RCCD1A6NED2 376 aa9.2□□□□□ -0.94
CFDP1-204ENST00000564793 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
CFDP1-204ENST00000564793 TOPBP1Q92547 1522 aa9.2□□□□□ -0.94
CFDP1-204ENST00000564793 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.19□□□□□ -0.94
CFDP1-204ENST00000564793 PLEKHG3A1L390 1219 aa9.19□□□□□ -0.94
CFDP1-204ENST00000564793 DDRGK1Q96HY6 314 aa9.19□□□□□ -0.94
CFDP1-204ENST00000564793 ONECUT3O60422 494 aaPredicted RBP9.18□□□□□ -0.94
CFDP1-204ENST00000564793 DNAJB2P25686 324 aa9.17□□□□□ -0.94
CFDP1-204ENST00000564793 SSTR3P32745 418 aaPredicted RBP9.17□□□□□ -0.94
CFDP1-204ENST00000564793 SLC4A5Q9BY07 1137 aa9.17□□□□□ -0.94
CFDP1-204ENST00000564793 FAM217BQ9NTX9 383 aaPredicted RBP9.17□□□□□ -0.94
CFDP1-204ENST00000564793 DAXXQ9UER7 740 aaPredicted RBP9.16□□□□□ -0.94
CFDP1-204ENST00000564793 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
CFDP1-204ENST00000564793 RABGEF1Q9UJ41 708 aa9.16□□□□□ -0.94
CFDP1-204ENST00000564793 GTF3C3Q9Y5Q9 886 aa9.16□□□□□ -0.94
CFDP1-204ENST00000564793 CHD1O14646 1710 aa9.16□□□□□ -0.94
CFDP1-204ENST00000564793 VPS9D1Q9Y2B5 631 aa9.15□□□□□ -0.94
CFDP1-204ENST00000564793 TMEM134Q9H6X4 195 aa9.14□□□□□ -0.95
CFDP1-204ENST00000564793 IFT140Q96RY7 1462 aa9.14□□□□□ -0.95
CFDP1-204ENST00000564793 BEGAINQ9BUH8 593 aa9.13□□□□□ -0.95
CFDP1-204ENST00000564793 ZNF608Q9ULD9 1512 aaPredicted RBP9.13□□□□□ -0.95
CFDP1-204ENST00000564793 ABCC8Q09428 1581 aa9.12□□□□□ -0.95
CFDP1-204ENST00000564793 POLA1P09884 1462 aaPredicted RBP9.11□□□□□ -0.95
CFDP1-204ENST00000564793 LSM11P83369 360 aaKnown RBP eCLIP9.11□□□□□ -0.95
CFDP1-204ENST00000564793 PBRM1Q86U86 1689 aa9.1□□□□□ -0.95
CFDP1-204ENST00000564793 DDX11L8A8MPP1 907 aa9.1□□□□□ -0.95
CFDP1-204ENST00000564793 CUX1P39880 1505 aa9.1□□□□□ -0.95
CFDP1-204ENST00000564793 TK2O00142 265 aa9.09□□□□□ -0.95
CFDP1-204ENST00000564793 FAM98CQ17RN3 349 aaKnown RBP9.09□□□□□ -0.95
CFDP1-204ENST00000564793 NBPF3Q9H094 633 aa9.09□□□□□ -0.95
CFDP1-204ENST00000564793 CD46P15529 392 aa9.08□□□□□ -0.96
CFDP1-204ENST00000564793 SWT1Q5T5J6 900 aaKnown RBP9.08□□□□□ -0.96
CFDP1-204ENST00000564793 ADGRD1Q6QNK2 874 aa9.08□□□□□ -0.96
CFDP1-204ENST00000564793 SULF1Q8IWU6 871 aa9.08□□□□□ -0.96
CFDP1-204ENST00000564793 ABCA5Q8WWZ7 1642 aa9.07□□□□□ -0.96
CFDP1-204ENST00000564793 BIVM-ERCC5R4GMW8 1640 aa9.07□□□□□ -0.96
CFDP1-204ENST00000564793 RIMBP3CA6NJZ7 1639 aa9.06□□□□□ -0.96
CFDP1-204ENST00000564793 RIMBP3BA6NNM3 1639 aa9.06□□□□□ -0.96
CFDP1-204ENST00000564793 RIMBP3Q9UFD9 1639 aa9.06□□□□□ -0.96
CFDP1-204ENST00000564793 BHMG1C9JSJ3 638 aaPredicted RBP9.06□□□□□ -0.96
CFDP1-204ENST00000564793 SH3D19Q5HYK7 790 aa9.06□□□□□ -0.96
CFDP1-204ENST00000564793 RDH13Q8NBN7 331 aa9.06□□□□□ -0.96
CFDP1-204ENST00000564793 FGD5Q6ZNL6 1462 aa9.06□□□□□ -0.96
CFDP1-204ENST00000564793 ANKRD13DQ6ZTN6 518 aa9.05□□□□□ -0.96
CFDP1-204ENST00000564793 LAPTM4BQ86VI4 370 aa9.05□□□□□ -0.96
CFDP1-204ENST00000564793 SAMD7Q7Z3H4 446 aa9.04□□□□□ -0.96
CFDP1-204ENST00000564793 MRPL50Q8N5N7 158 aaKnown RBP9.04□□□□□ -0.96
CFDP1-204ENST00000564793 PCMTD1Q96MG8 357 aaPredicted RBP9.04□□□□□ -0.96
CFDP1-204ENST00000564793 TBC1D2Q9BYX2 928 aa9.04□□□□□ -0.96
CFDP1-204ENST00000564793 RSPH6AQ9H0K4 717 aa9.04□□□□□ -0.96
CFDP1-204ENST00000564793 GOPCQ9HD26 462 aa9.04□□□□□ -0.96
CFDP1-204ENST00000564793 HRO43593 1189 aa9.03□□□□□ -0.96
CFDP1-204ENST00000564793 HDGFP51858 240 aaKnown RBP9.03□□□□□ -0.96
CFDP1-204ENST00000564793 MYSM1Q5VVJ2 828 aa9.03□□□□□ -0.96
CFDP1-204ENST00000564793 ZFRQ96KR1 1074 aaKnown RBP9.03□□□□□ -0.96
CFDP1-204ENST00000564793 RNF40O75150 1001 aa9.02□□□□□ -0.97
CFDP1-204ENST00000564793 SLC10A3P09131 477 aa9.02□□□□□ -0.97
CFDP1-204ENST00000564793 SPIRE2Q8WWL2 714 aa9.02□□□□□ -0.97
CFDP1-204ENST00000564793 POLR3EQ9NVU0 708 aa9.02□□□□□ -0.97
CFDP1-204ENST00000564793 RAD54L2Q9Y4B4 1467 aa9.02□□□□□ -0.97
CFDP1-204ENST00000564793 CLASP1Q7Z460 1538 aa9.01□□□□□ -0.97
CFDP1-204ENST00000564793 SYNJ1O43426 1573 aa9.01□□□□□ -0.97
CFDP1-204ENST00000564793 SKIV2LQ15477 1246 aaKnown RBP9.01□□□□□ -0.97
CFDP1-204ENST00000564793 NUTM1Q86Y26 1132 aa9.01□□□□□ -0.97
CFDP1-204ENST00000564793 KRTAP3-3Q9BYR6 98 aa9.01□□□□□ -0.97
CFDP1-204ENST00000564793 KRTAP3-2Q9BYR7 98 aa9.01□□□□□ -0.97
CFDP1-204ENST00000564793 TIMELESSQ9UNS1 1208 aa9.01□□□□□ -0.97
CFDP1-204ENST00000564793 TOP2BQ02880 1626 aa9.01□□□□□ -0.97
CFDP1-204ENST00000564793 SLC4A3P48751 1232 aa9□□□□□ -0.97
CFDP1-204ENST00000564793 SLF2Q8IX21 1173 aa9□□□□□ -0.97
CFDP1-204ENST00000564793 ARHGEF11O15085 1522 aa9□□□□□ -0.97
CFDP1-204ENST00000564793 CLK2P49760 499 aaKnown RBP8.99□□□□□ -0.97
CFDP1-204ENST00000564793 DIXDC1Q155Q3 683 aa8.99□□□□□ -0.97
CFDP1-204ENST00000564793 RSPH4AQ5TD94 716 aa8.99□□□□□ -0.97
CFDP1-204ENST00000564793 PROCA1Q8NCQ7 364 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms