RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 NKTRP30414 1462 aaKnown RBP24.7■■□□□ 1.55
CDH11-210ENST00000564770 TMEM94Q12767 1356 aa24.7■■□□□ 1.55
CDH11-210ENST00000564770 SLC26A8Q96RN1 970 aa24.69■■□□□ 1.54
CDH11-210ENST00000564770 CHD2O14647 1828 aaKnown RBP24.69■■□□□ 1.54
CDH11-210ENST00000564770 SLC52A1Q9NWF4 448 aa24.67■■□□□ 1.54
CDH11-210ENST00000564770 KCNA6P17658 529 aa24.64■■□□□ 1.54
CDH11-210ENST00000564770 FAM135BQ49AJ0 1406 aa24.63■■□□□ 1.53
CDH11-210ENST00000564770 RIMS2Q9UQ26 1411 aa24.63■■□□□ 1.53
CDH11-210ENST00000564770 RBM33Q96EV2 1170 aaKnown RBP24.63■■□□□ 1.53
CDH11-210ENST00000564770 PHF23Q9BUL5 403 aaPredicted RBP24.62■■□□□ 1.53
CDH11-210ENST00000564770 ROCK1Q13464 1354 aa24.62■■□□□ 1.53
CDH11-210ENST00000564770 PLEKHG1Q9ULL1 1385 aa24.62■■□□□ 1.53
CDH11-210ENST00000564770 DIP2AQ14689 1571 aa24.56■■□□□ 1.52
CDH11-210ENST00000564770 PROSER2Q86WR7 435 aaPredicted RBP24.56■■□□□ 1.52
CDH11-210ENST00000564770 SPHKAPQ2M3C7 1700 aa24.55■■□□□ 1.52
CDH11-210ENST00000564770 PHLPP1O60346 1717 aa24.55■■□□□ 1.52
CDH11-210ENST00000564770 ADAMTS13Q76LX8 1427 aa24.54■■□□□ 1.52
CDH11-210ENST00000564770 BCANQ96GW7 911 aa24.53■■□□□ 1.52
CDH11-210ENST00000564770 RGS17Q9UGC6 210 aaPredicted RBP24.52■■□□□ 1.52
CDH11-210ENST00000564770 MSH6P52701 1360 aa24.52■■□□□ 1.52
CDH11-210ENST00000564770 NRXN3Q9Y4C0 1643 aa24.51■■□□□ 1.51
CDH11-210ENST00000564770 PPP1R15AO75807 674 aaPredicted RBP24.51■■□□□ 1.51
CDH11-210ENST00000564770 COL16A1Q07092 1604 aaPredicted RBP24.5■■□□□ 1.51
CDH11-210ENST00000564770 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.49■■□□□ 1.51
CDH11-210ENST00000564770 NUP155O75694 1391 aa24.48■■□□□ 1.51
CDH11-210ENST00000564770 CHGAP10645 457 aaKnown RBP24.47■■□□□ 1.51
CDH11-210ENST00000564770 NUTM2DQ5VT03 806 aaPredicted RBP24.47■■□□□ 1.51
CDH11-210ENST00000564770 TRPM2O94759 1503 aa24.46■■□□□ 1.51
CDH11-210ENST00000564770 ITGAEP38570 1179 aa24.46■■□□□ 1.51
CDH11-210ENST00000564770 XRN1Q8IZH2 1706 aaKnown RBP24.46■■□□□ 1.51
CDH11-210ENST00000564770 PPARGC1BQ86YN6 1023 aaKnown RBP24.45■■□□□ 1.5
CDH11-210ENST00000564770 TBX22Q9Y458 520 aa24.44■■□□□ 1.5
CDH11-210ENST00000564770 SETBP1Q9Y6X0 1596 aa24.42■■□□□ 1.5
CDH11-210ENST00000564770 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.42■■□□□ 1.5
CDH11-210ENST00000564770 PTPRUQ92729 1446 aa24.42■■□□□ 1.5
CDH11-210ENST00000564770 CLTCL1P53675 1640 aa24.42■■□□□ 1.5
CDH11-210ENST00000564770 HDGFP51858 240 aaKnown RBP24.41■■□□□ 1.5
CDH11-210ENST00000564770 NCOA3Q9Y6Q9 1424 aa24.41■■□□□ 1.5
CDH11-210ENST00000564770 PIK3R4Q99570 1358 aa24.41■■□□□ 1.5
CDH11-210ENST00000564770 SLAIN2Q9P270 581 aa24.4■■□□□ 1.5
CDH11-210ENST00000564770 AHDC1Q5TGY3 1603 aaPredicted RBP24.39■■□□□ 1.5
CDH11-210ENST00000564770 SETD1AO15047 1707 aaKnown RBP24.38■■□□□ 1.49
CDH11-210ENST00000564770 NEXMIFQ5QGS0 1516 aa24.36■■□□□ 1.49
CDH11-210ENST00000564770 SHPRHQ149N8 1683 aa24.36■■□□□ 1.49
CDH11-210ENST00000564770 RRBP1Q9P2E9 1410 aaKnown RBP24.35■■□□□ 1.49
CDH11-210ENST00000564770 JCADQ9P266 1359 aa24.35■■□□□ 1.49
CDH11-210ENST00000564770 POTEAQ6S8J7 498 aa24.35■■□□□ 1.49
CDH11-210ENST00000564770 LRP6O75581 1613 aa24.35■■□□□ 1.49
CDH11-210ENST00000564770 KIF1BO60333 1816 aa24.34■■□□□ 1.49
CDH11-210ENST00000564770 NALCNQ8IZF0 1738 aa24.32■■□□□ 1.48
CDH11-210ENST00000564770 NAIPQ13075 1403 aa24.31■■□□□ 1.48
CDH11-210ENST00000564770 C14orf37Q86TY3 774 aa24.31■■□□□ 1.48
CDH11-210ENST00000564770 NHSL1Q5SYE7 1610 aa24.3■■□□□ 1.48
CDH11-210ENST00000564770 AMOTL2Q9Y2J4 779 aa24.29■■□□□ 1.48
CDH11-210ENST00000564770 DCCP43146 1447 aa24.28■■□□□ 1.48
CDH11-210ENST00000564770 ASXL1Q8IXJ9 1541 aa24.27■■□□□ 1.48
CDH11-210ENST00000564770 CADPS2Q86UW7 1296 aa24.27■■□□□ 1.48
CDH11-210ENST00000564770 C19orf44Q9H6X5 657 aa24.27■■□□□ 1.48
CDH11-210ENST00000564770 METP08581 1390 aa24.27■■□□□ 1.48
CDH11-210ENST00000564770 ATF3P18847 181 aa24.24■■□□□ 1.47
CDH11-210ENST00000564770 MST1RQ04912 1400 aa24.24■■□□□ 1.47
CDH11-210ENST00000564770 ZNF326Q5BKZ1 582 aaKnown RBP24.23■■□□□ 1.47
CDH11-210ENST00000564770 BRINP3Q76B58 766 aa24.22■■□□□ 1.47
CDH11-210ENST00000564770 ADGRL3Q9HAR2 1447 aa24.21■■□□□ 1.47
CDH11-210ENST00000564770 PPLO60437 1756 aa24.21■■□□□ 1.47
CDH11-210ENST00000564770 HFM1A2PYH4 1435 aa24.19■■□□□ 1.46
CDH11-210ENST00000564770 SPATA31A6Q5VVP1 1343 aa24.19■■□□□ 1.46
CDH11-210ENST00000564770 PTCH1Q13635 1447 aa24.13■■□□□ 1.45
CDH11-210ENST00000564770 SETD5Q9C0A6 1442 aa24.13■■□□□ 1.45
CDH11-210ENST00000564770 LAMC1P11047 1609 aa24.13■■□□□ 1.45
CDH11-210ENST00000564770 PRAG1Q86YV5 1406 aa24.1■■□□□ 1.45
CDH11-210ENST00000564770 IFT172Q9UG01 1749 aa24.1■■□□□ 1.45
CDH11-210ENST00000564770 MEX3CQ5U5Q3 659 aaKnown RBP24.09■■□□□ 1.45
CDH11-210ENST00000564770 ROBO2Q9HCK4 1378 aa24.08■■□□□ 1.45
CDH11-210ENST00000564770 C1orf167Q5SNV9 1468 aa24.07■■□□□ 1.44
CDH11-210ENST00000564770 DDX17Q92841 729 aaKnown RBP24.06■■□□□ 1.44
CDH11-210ENST00000564770 TRIM52Q96A61 297 aa24.05■■□□□ 1.44
CDH11-210ENST00000564770 PNPLA6Q8IY17 1366 aa24.04■■□□□ 1.44
CDH11-210ENST00000564770 NUTM2BA6NNL0 878 aaPredicted RBP24.03■■□□□ 1.44
CDH11-210ENST00000564770 NUTM2EB1AL46 878 aaPredicted RBP24.03■■□□□ 1.44
CDH11-210ENST00000564770 ZNF772Q68DY9 489 aaPredicted RBP24.03■■□□□ 1.44
CDH11-210ENST00000564770 NUTM2AQ8IVF1 878 aaPredicted RBP24.03■■□□□ 1.44
CDH11-210ENST00000564770 SLC4A1APQ9BWU0 796 aaKnown RBP24.03■■□□□ 1.44
CDH11-210ENST00000564770 CDC42BPGQ6DT37 1551 aa24■■□□□ 1.43
CDH11-210ENST00000564770 VGFO15240 615 aaPredicted RBP24■■□□□ 1.43
CDH11-210ENST00000564770 AFF2P51816 1311 aa23.99■■□□□ 1.43
CDH11-210ENST00000564770 KNDC1Q76NI1 1749 aa23.98■■□□□ 1.43
CDH11-210ENST00000564770 FOXD1Q16676 465 aa23.98■■□□□ 1.43
CDH11-210ENST00000564770 RPGRIP1LQ68CZ1 1315 aa23.98■■□□□ 1.43
CDH11-210ENST00000564770 CDK12Q9NYV4 1490 aaPredicted RBP23.98■■□□□ 1.43
CDH11-210ENST00000564770 LRRC59Q96AG4 307 aaKnown RBP23.97■■□□□ 1.43
CDH11-210ENST00000564770 COL22A1Q8NFW1 1626 aaPredicted RBP23.96■■□□□ 1.43
CDH11-210ENST00000564770 SPATA31E1Q6ZUB1 1445 aa23.96■■□□□ 1.43
CDH11-210ENST00000564770 CCDC144AA2RUR9 1427 aa23.94■■□□□ 1.42
CDH11-210ENST00000564770 ORAI2Q96SN7 254 aa23.93■■□□□ 1.42
CDH11-210ENST00000564770 RGS12O14924 1447 aa23.93■■□□□ 1.42
CDH11-210ENST00000564770 SOS2Q07890 1332 aaPredicted RBP23.91■■□□□ 1.42
CDH11-210ENST00000564770 ADGRF5Q8IZF2 1346 aa23.91■■□□□ 1.42
CDH11-210ENST00000564770 RXRBP28702 533 aa23.91■■□□□ 1.42
CDH11-210ENST00000564770 UPF1Q92900 1129 aaKnown RBP eCLIP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms