RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 SLIT1O75093 1534 aa20.37■□□□□ 0.85
CNOT1-206ENST00000564557 ADGRB3O60242 1522 aa20.37■□□□□ 0.85
CNOT1-206ENST00000564557 ARHGAP23Q9P227 1491 aa20.37■□□□□ 0.85
CNOT1-206ENST00000564557 IQGAP1P46940 1657 aa20.36■□□□□ 0.85
CNOT1-206ENST00000564557 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
CNOT1-206ENST00000564557 PPP1R15AO75807 674 aaPredicted RBP20.36■□□□□ 0.85
CNOT1-206ENST00000564557 LTBP4Q8N2S1 1624 aa20.35■□□□□ 0.85
CNOT1-206ENST00000564557 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.32■□□□□ 0.84
CNOT1-206ENST00000564557 SETD5Q9C0A6 1442 aa20.31■□□□□ 0.84
CNOT1-206ENST00000564557 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
CNOT1-206ENST00000564557 SPHKAPQ2M3C7 1700 aa20.3■□□□□ 0.84
CNOT1-206ENST00000564557 RIMS2Q9UQ26 1411 aa20.29■□□□□ 0.84
CNOT1-206ENST00000564557 TMEM131LA2VDJ0 1609 aa20.28■□□□□ 0.84
CNOT1-206ENST00000564557 RNF216Q9NWF9 866 aaPredicted RBP20.28■□□□□ 0.84
CNOT1-206ENST00000564557 IQSEC2Q5JU85 1478 aa20.28■□□□□ 0.84
CNOT1-206ENST00000564557 CPS1P31327 1500 aa20.27■□□□□ 0.84
CNOT1-206ENST00000564557 MYO5BQ9ULV0 1848 aa20.27■□□□□ 0.84
CNOT1-206ENST00000564557 HOXD11P31277 338 aaPredicted RBP20.26■□□□□ 0.83
CNOT1-206ENST00000564557 SLC26A8Q96RN1 970 aa20.26■□□□□ 0.83
CNOT1-206ENST00000564557 MPHOSPH9Q99550 1183 aa20.26■□□□□ 0.83
CNOT1-206ENST00000564557 NUTM2DQ5VT03 806 aaPredicted RBP20.25■□□□□ 0.83
CNOT1-206ENST00000564557 UBAP1LF5GYI3 381 aa20.24■□□□□ 0.83
CNOT1-206ENST00000564557 NPM3O75607 178 aaKnown RBP20.24■□□□□ 0.83
CNOT1-206ENST00000564557 TRPM2O94759 1503 aa20.22■□□□□ 0.83
CNOT1-206ENST00000564557 ZFYVE9O95405 1425 aa20.22■□□□□ 0.83
CNOT1-206ENST00000564557 PLEKHG1Q9ULL1 1385 aa20.21■□□□□ 0.83
CNOT1-206ENST00000564557 RAB3GAP2Q9H2M9 1393 aa20.21■□□□□ 0.83
CNOT1-206ENST00000564557 TOM1O60784 492 aa20.19■□□□□ 0.82
CNOT1-206ENST00000564557 KIF1BO60333 1816 aa20.18■□□□□ 0.82
CNOT1-206ENST00000564557 CLTCL1P53675 1640 aa20.18■□□□□ 0.82
CNOT1-206ENST00000564557 KCNA6P17658 529 aa20.18■□□□□ 0.82
CNOT1-206ENST00000564557 TBX22Q9Y458 520 aa20.17■□□□□ 0.82
CNOT1-206ENST00000564557 CCDC144AA2RUR9 1427 aa20.16■□□□□ 0.82
CNOT1-206ENST00000564557 PROSER2Q86WR7 435 aaPredicted RBP20.15■□□□□ 0.82
CNOT1-206ENST00000564557 LRRC7Q96NW7 1537 aa20.13■□□□□ 0.81
CNOT1-206ENST00000564557 VGFO15240 615 aaPredicted RBP20.13■□□□□ 0.81
CNOT1-206ENST00000564557 HRCP23327 699 aa20.13■□□□□ 0.81
CNOT1-206ENST00000564557 STRCP1A6NGW2 1772 aa20.13■□□□□ 0.81
CNOT1-206ENST00000564557 RPGRIP1LQ68CZ1 1315 aa20.12■□□□□ 0.81
CNOT1-206ENST00000564557 PIP4K2BP78356 416 aa20.12■□□□□ 0.81
CNOT1-206ENST00000564557 RGL3Q3MIN7 710 aa20.1■□□□□ 0.81
CNOT1-206ENST00000564557 DIP2AQ14689 1571 aa20.08■□□□□ 0.8
CNOT1-206ENST00000564557 PIK3R4Q99570 1358 aa20.08■□□□□ 0.8
CNOT1-206ENST00000564557 ADAMTS13Q76LX8 1427 aa20.07■□□□□ 0.8
CNOT1-206ENST00000564557 TMEM94Q12767 1356 aa20.07■□□□□ 0.8
CNOT1-206ENST00000564557 C14orf37Q86TY3 774 aa20.06■□□□□ 0.8
CNOT1-206ENST00000564557 NEXMIFQ5QGS0 1516 aa20.06■□□□□ 0.8
CNOT1-206ENST00000564557 NKTRP30414 1462 aaKnown RBP20.05■□□□□ 0.8
CNOT1-206ENST00000564557 RBM33Q96EV2 1170 aaKnown RBP20.05■□□□□ 0.8
CNOT1-206ENST00000564557 AMOTL2Q9Y2J4 779 aa20.04■□□□□ 0.8
CNOT1-206ENST00000564557 CHD2O14647 1828 aaKnown RBP20.04■□□□□ 0.8
CNOT1-206ENST00000564557 NWD1Q149M9 1564 aa20.03■□□□□ 0.8
CNOT1-206ENST00000564557 SETBP1Q9Y6X0 1596 aa20.02■□□□□ 0.8
CNOT1-206ENST00000564557 MSH6P52701 1360 aa20.01■□□□□ 0.79
CNOT1-206ENST00000564557 ANKRD30BQ9BXX2 1392 aa19.99■□□□□ 0.79
CNOT1-206ENST00000564557 SPATA31E1Q6ZUB1 1445 aa19.98■□□□□ 0.79
CNOT1-206ENST00000564557 PPLO60437 1756 aa19.97■□□□□ 0.79
CNOT1-206ENST00000564557 NRXN3Q9Y4C0 1643 aa19.97■□□□□ 0.79
CNOT1-206ENST00000564557 XIRP1Q702N8 1843 aaKnown RBP19.97■□□□□ 0.79
CNOT1-206ENST00000564557 METP08581 1390 aa19.96■□□□□ 0.79
CNOT1-206ENST00000564557 NCOA3Q9Y6Q9 1424 aa19.95■□□□□ 0.78
CNOT1-206ENST00000564557 PTPRUQ92729 1446 aa19.94■□□□□ 0.78
CNOT1-206ENST00000564557 ATF3P18847 181 aa19.94■□□□□ 0.78
CNOT1-206ENST00000564557 HSPA1LP34931 641 aa19.94■□□□□ 0.78
CNOT1-206ENST00000564557 C19orf44Q9H6X5 657 aa19.94■□□□□ 0.78
CNOT1-206ENST00000564557 ADGRF5Q8IZF2 1346 aa19.94■□□□□ 0.78
CNOT1-206ENST00000564557 TRIM26Q12899 539 aaPredicted RBP19.92■□□□□ 0.78
CNOT1-206ENST00000564557 CADPS2Q86UW7 1296 aa19.92■□□□□ 0.78
CNOT1-206ENST00000564557 ALKQ9UM73 1620 aa19.91■□□□□ 0.78
CNOT1-206ENST00000564557 SLAIN2Q9P270 581 aa19.9■□□□□ 0.78
CNOT1-206ENST00000564557 DCAF8L1A6NGE4 600 aa19.89■□□□□ 0.77
CNOT1-206ENST00000564557 KDM2AQ9Y2K7 1162 aa19.88■□□□□ 0.77
CNOT1-206ENST00000564557 FAM135BQ49AJ0 1406 aa19.87■□□□□ 0.77
CNOT1-206ENST00000564557 DCAF11Q8TEB1 546 aa19.87■□□□□ 0.77
CNOT1-206ENST00000564557 XRN1Q8IZH2 1706 aaKnown RBP19.87■□□□□ 0.77
CNOT1-206ENST00000564557 IFT172Q9UG01 1749 aa19.86■□□□□ 0.77
CNOT1-206ENST00000564557 STK26Q9P289 416 aa19.86■□□□□ 0.77
CNOT1-206ENST00000564557 STAC3Q96MF2 364 aa19.85■□□□□ 0.77
CNOT1-206ENST00000564557 TMEM132EQ6IEE7 984 aa19.84■□□□□ 0.77
CNOT1-206ENST00000564557 PIK3C2GO75747 1445 aa19.84■□□□□ 0.77
CNOT1-206ENST00000564557 C14orf93Q9H972 538 aaKnown RBP19.83■□□□□ 0.77
CNOT1-206ENST00000564557 SETD1AO15047 1707 aaKnown RBP19.82■□□□□ 0.76
CNOT1-206ENST00000564557 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.82■□□□□ 0.76
CNOT1-206ENST00000564557 MYOM2P54296 1465 aa19.82■□□□□ 0.76
CNOT1-206ENST00000564557 CFAP70Q5T0N1 1121 aa19.82■□□□□ 0.76
CNOT1-206ENST00000564557 PTCH1Q13635 1447 aa19.82■□□□□ 0.76
CNOT1-206ENST00000564557 ROBO2Q9HCK4 1378 aa19.81■□□□□ 0.76
CNOT1-206ENST00000564557 DCCP43146 1447 aa19.8■□□□□ 0.76
CNOT1-206ENST00000564557 ROBO1Q9Y6N7 1651 aa19.8■□□□□ 0.76
CNOT1-206ENST00000564557 DHX57Q6P158 1386 aaKnown RBP19.8■□□□□ 0.76
CNOT1-206ENST00000564557 DISP3Q9P2K9 1392 aa19.8■□□□□ 0.76
CNOT1-206ENST00000564557 ADGRL3Q9HAR2 1447 aa19.79■□□□□ 0.76
CNOT1-206ENST00000564557 LRPPRCP42704 1394 aaKnown RBP19.79■□□□□ 0.76
CNOT1-206ENST00000564557 NRXN1Q9ULB1 1477 aa19.77■□□□□ 0.76
CNOT1-206ENST00000564557 YTHDC2Q9H6S0 1430 aaKnown RBP19.76■□□□□ 0.75
CNOT1-206ENST00000564557 ABCC11Q96J66 1382 aa19.76■□□□□ 0.75
CNOT1-206ENST00000564557 LAMC1P11047 1609 aa19.76■□□□□ 0.75
CNOT1-206ENST00000564557 WAPLQ7Z5K2 1190 aa19.75■□□□□ 0.75
CNOT1-206ENST00000564557 PRAG1Q86YV5 1406 aa19.75■□□□□ 0.75
CNOT1-206ENST00000564557 NEUROD1Q13562 356 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms