RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 ZFYVE9O95405 1425 aa21.46■■□□□ 1.03
KNOP1-202ENST00000564480 NWD1Q149M9 1564 aa21.46■■□□□ 1.03
KNOP1-202ENST00000564480 ANKRD50Q9ULJ7 1429 aa21.46■■□□□ 1.03
KNOP1-202ENST00000564480 BCANQ96GW7 911 aa21.45■■□□□ 1.02
KNOP1-202ENST00000564480 NKTRP30414 1462 aaKnown RBP21.44■■□□□ 1.02
KNOP1-202ENST00000564480 RPRD2Q5VT52 1461 aaKnown RBP21.42■■□□□ 1.02
KNOP1-202ENST00000564480 SLAIN2Q9P270 581 aa21.42■■□□□ 1.02
KNOP1-202ENST00000564480 RIMS2Q9UQ26 1411 aa21.41■■□□□ 1.02
KNOP1-202ENST00000564480 PLEKHG1Q9ULL1 1385 aa21.41■■□□□ 1.02
KNOP1-202ENST00000564480 MYO5BQ9ULV0 1848 aa21.4■■□□□ 1.02
KNOP1-202ENST00000564480 MSH6P52701 1360 aa21.39■■□□□ 1.02
KNOP1-202ENST00000564480 TMEM131LA2VDJ0 1609 aa21.39■■□□□ 1.01
KNOP1-202ENST00000564480 NUTM2DQ5VT03 806 aaPredicted RBP21.38■■□□□ 1.01
KNOP1-202ENST00000564480 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
KNOP1-202ENST00000564480 TBX22Q9Y458 520 aa21.37■■□□□ 1.01
KNOP1-202ENST00000564480 GCC2Q8IWJ2 1684 aa21.37■■□□□ 1.01
KNOP1-202ENST00000564480 CHD2O14647 1828 aaKnown RBP21.36■■□□□ 1.01
KNOP1-202ENST00000564480 CHGAP10645 457 aaKnown RBP21.35■■□□□ 1.01
KNOP1-202ENST00000564480 ADAMTS13Q76LX8 1427 aa21.35■■□□□ 1.01
KNOP1-202ENST00000564480 UNC13BO14795 1591 aa21.32■■□□□ 1
KNOP1-202ENST00000564480 HDGFP51858 240 aaKnown RBP21.32■■□□□ 1
KNOP1-202ENST00000564480 PHLPP1O60346 1717 aa21.32■■□□□ 1
KNOP1-202ENST00000564480 E9PCH4 1651 aa21.31■■□□□ 1
KNOP1-202ENST00000564480 JCADQ9P266 1359 aa21.31■■□□□ 1
KNOP1-202ENST00000564480 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.29■■□□□ 1
KNOP1-202ENST00000564480 COL16A1Q07092 1604 aaPredicted RBP21.29■■□□□ 1
KNOP1-202ENST00000564480 LRP6O75581 1613 aa21.27■■□□□ 1
KNOP1-202ENST00000564480 PTPRUQ92729 1446 aa21.27■■□□□ 1
KNOP1-202ENST00000564480 NCOA3Q9Y6Q9 1424 aa21.27■■□□□ 1
KNOP1-202ENST00000564480 C14orf37Q86TY3 774 aa21.26■□□□□ 0.99
KNOP1-202ENST00000564480 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
KNOP1-202ENST00000564480 C19orf44Q9H6X5 657 aa21.25■□□□□ 0.99
KNOP1-202ENST00000564480 AMOTL2Q9Y2J4 779 aa21.24■□□□□ 0.99
KNOP1-202ENST00000564480 IQGAP3Q86VI3 1631 aa21.24■□□□□ 0.99
KNOP1-202ENST00000564480 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.24■□□□□ 0.99
KNOP1-202ENST00000564480 NUP155O75694 1391 aa21.23■□□□□ 0.99
KNOP1-202ENST00000564480 SETD1AO15047 1707 aaKnown RBP21.23■□□□□ 0.99
KNOP1-202ENST00000564480 PIK3R4Q99570 1358 aa21.23■□□□□ 0.99
KNOP1-202ENST00000564480 CADPS2Q86UW7 1296 aa21.22■□□□□ 0.99
KNOP1-202ENST00000564480 ITGAEP38570 1179 aa21.21■□□□□ 0.99
KNOP1-202ENST00000564480 DIP2AQ14689 1571 aa21.2■□□□□ 0.98
KNOP1-202ENST00000564480 ATF3P18847 181 aa21.2■□□□□ 0.98
KNOP1-202ENST00000564480 AHDC1Q5TGY3 1603 aaPredicted RBP21.19■□□□□ 0.98
KNOP1-202ENST00000564480 BRINP3Q76B58 766 aa21.19■□□□□ 0.98
KNOP1-202ENST00000564480 SPATA31A6Q5VVP1 1343 aa21.19■□□□□ 0.98
KNOP1-202ENST00000564480 PPARGC1BQ86YN6 1023 aaKnown RBP21.18■□□□□ 0.98
KNOP1-202ENST00000564480 TRPM2O94759 1503 aa21.17■□□□□ 0.98
KNOP1-202ENST00000564480 NRXN3Q9Y4C0 1643 aa21.16■□□□□ 0.98
KNOP1-202ENST00000564480 METP08581 1390 aa21.14■□□□□ 0.98
KNOP1-202ENST00000564480 MEX3CQ5U5Q3 659 aaKnown RBP21.14■□□□□ 0.97
KNOP1-202ENST00000564480 SHPRHQ149N8 1683 aa21.12■□□□□ 0.97
KNOP1-202ENST00000564480 NUTM2BA6NNL0 878 aaPredicted RBP21.12■□□□□ 0.97
KNOP1-202ENST00000564480 NUTM2EB1AL46 878 aaPredicted RBP21.12■□□□□ 0.97
KNOP1-202ENST00000564480 NUTM2AQ8IVF1 878 aaPredicted RBP21.12■□□□□ 0.97
KNOP1-202ENST00000564480 TRIM52Q96A61 297 aa21.12■□□□□ 0.97
KNOP1-202ENST00000564480 XRN1Q8IZH2 1706 aaKnown RBP21.12■□□□□ 0.97
KNOP1-202ENST00000564480 SETBP1Q9Y6X0 1596 aa21.11■□□□□ 0.97
KNOP1-202ENST00000564480 ZNF772Q68DY9 489 aaPredicted RBP21.11■□□□□ 0.97
KNOP1-202ENST00000564480 MST1RQ04912 1400 aa21.11■□□□□ 0.97
KNOP1-202ENST00000564480 DDX17Q92841 729 aaKnown RBP21.1■□□□□ 0.97
KNOP1-202ENST00000564480 UPF1Q92900 1129 aaKnown RBP eCLIP21.1■□□□□ 0.97
KNOP1-202ENST00000564480 ASXL1Q8IXJ9 1541 aa21.09■□□□□ 0.97
KNOP1-202ENST00000564480 ZNF326Q5BKZ1 582 aaKnown RBP21.09■□□□□ 0.97
KNOP1-202ENST00000564480 DCCP43146 1447 aa21.09■□□□□ 0.97
KNOP1-202ENST00000564480 SPHKAPQ2M3C7 1700 aa21.07■□□□□ 0.96
KNOP1-202ENST00000564480 SETD5Q9C0A6 1442 aa21.06■□□□□ 0.96
KNOP1-202ENST00000564480 RXRBP28702 533 aa21.04■□□□□ 0.96
KNOP1-202ENST00000564480 CLTCL1P53675 1640 aa21.04■□□□□ 0.96
KNOP1-202ENST00000564480 NEXMIFQ5QGS0 1516 aa21.04■□□□□ 0.96
KNOP1-202ENST00000564480 AFF2P51816 1311 aa21.04■□□□□ 0.96
KNOP1-202ENST00000564480 NHSL1Q5SYE7 1610 aa21.02■□□□□ 0.96
KNOP1-202ENST00000564480 ADGRL3Q9HAR2 1447 aa21.02■□□□□ 0.96
KNOP1-202ENST00000564480 LRRC59Q96AG4 307 aaKnown RBP21.01■□□□□ 0.95
KNOP1-202ENST00000564480 PNPLA6Q8IY17 1366 aa21■□□□□ 0.95
KNOP1-202ENST00000564480 NALCNQ8IZF0 1738 aa20.98■□□□□ 0.95
KNOP1-202ENST00000564480 C8orf37Q96NL8 207 aa20.97■□□□□ 0.95
KNOP1-202ENST00000564480 NAIPQ13075 1403 aa20.96■□□□□ 0.95
KNOP1-202ENST00000564480 C1orf167Q5SNV9 1468 aa20.96■□□□□ 0.95
KNOP1-202ENST00000564480 CDK12Q9NYV4 1490 aaPredicted RBP20.96■□□□□ 0.95
KNOP1-202ENST00000564480 ORAI2Q96SN7 254 aa20.96■□□□□ 0.95
KNOP1-202ENST00000564480 ROBO2Q9HCK4 1378 aa20.96■□□□□ 0.95
KNOP1-202ENST00000564480 QTRT2Q9H974 415 aaKnown RBP20.95■□□□□ 0.94
KNOP1-202ENST00000564480 ADAMTS2O95450 1211 aa20.92■□□□□ 0.94
KNOP1-202ENST00000564480 RGS12O14924 1447 aa20.92■□□□□ 0.94
KNOP1-202ENST00000564480 RRBP1Q9P2E9 1410 aaKnown RBP20.91■□□□□ 0.94
KNOP1-202ENST00000564480 SOS2Q07890 1332 aaPredicted RBP20.9■□□□□ 0.94
KNOP1-202ENST00000564480 VGFO15240 615 aaPredicted RBP20.9■□□□□ 0.94
KNOP1-202ENST00000564480 RBM6P78332 1123 aaKnown RBP20.9■□□□□ 0.94
KNOP1-202ENST00000564480 PTCH1Q13635 1447 aa20.89■□□□□ 0.94
KNOP1-202ENST00000564480 NGLY1Q96IV0 654 aa20.89■□□□□ 0.93
KNOP1-202ENST00000564480 KIF1BO60333 1816 aa20.89■□□□□ 0.93
KNOP1-202ENST00000564480 LAMC1P11047 1609 aa20.88■□□□□ 0.93
KNOP1-202ENST00000564480 PRAG1Q86YV5 1406 aa20.86■□□□□ 0.93
KNOP1-202ENST00000564480 RPGRIP1LQ68CZ1 1315 aa20.84■□□□□ 0.93
KNOP1-202ENST00000564480 FOXD1Q16676 465 aa20.84■□□□□ 0.93
KNOP1-202ENST00000564480 SLC4A1APQ9BWU0 796 aaKnown RBP20.83■□□□□ 0.93
KNOP1-202ENST00000564480 HFM1A2PYH4 1435 aa20.82■□□□□ 0.92
KNOP1-202ENST00000564480 USP21Q9UK80 565 aa20.82■□□□□ 0.92
KNOP1-202ENST00000564480 FNBP4Q8N3X1 1017 aaPredicted RBP20.81■□□□□ 0.92
KNOP1-202ENST00000564480 ADGRF5Q8IZF2 1346 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms