RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 XIRP1Q702N8 1843 aaKnown RBP25.61■■□□□ 1.69
CCNF-203ENST00000564236 NUP155O75694 1391 aa25.61■■□□□ 1.69
CCNF-203ENST00000564236 SLC26A8Q96RN1 970 aa25.6■■□□□ 1.69
CCNF-203ENST00000564236 RIMS2Q9UQ26 1411 aa25.6■■□□□ 1.69
CCNF-203ENST00000564236 HDGFP51858 240 aaKnown RBP25.59■■□□□ 1.69
CCNF-203ENST00000564236 TMEM94Q12767 1356 aa25.58■■□□□ 1.69
CCNF-203ENST00000564236 SOCS7O14512 581 aa25.58■■□□□ 1.69
CCNF-203ENST00000564236 MED1Q15648 1581 aaPredicted RBP25.56■■□□□ 1.68
CCNF-203ENST00000564236 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.55■■□□□ 1.68
CCNF-203ENST00000564236 FAM135BQ49AJ0 1406 aa25.54■■□□□ 1.68
CCNF-203ENST00000564236 ITGAEP38570 1179 aa25.54■■□□□ 1.68
CCNF-203ENST00000564236 PPARGC1BQ86YN6 1023 aaKnown RBP25.54■■□□□ 1.68
CCNF-203ENST00000564236 TBX22Q9Y458 520 aa25.53■■□□□ 1.68
CCNF-203ENST00000564236 MYO5BQ9ULV0 1848 aa25.52■■□□□ 1.68
CCNF-203ENST00000564236 ADAMTS13Q76LX8 1427 aa25.5■■□□□ 1.67
CCNF-203ENST00000564236 PROSER2Q86WR7 435 aaPredicted RBP25.5■■□□□ 1.67
CCNF-203ENST00000564236 DIP2AQ14689 1571 aa25.49■■□□□ 1.67
CCNF-203ENST00000564236 PPP1R15AO75807 674 aaPredicted RBP25.49■■□□□ 1.67
CCNF-203ENST00000564236 NAIPQ13075 1403 aa25.48■■□□□ 1.67
CCNF-203ENST00000564236 NCOA3Q9Y6Q9 1424 aa25.48■■□□□ 1.67
CCNF-203ENST00000564236 PIK3R4Q99570 1358 aa25.48■■□□□ 1.67
CCNF-203ENST00000564236 CHD2O14647 1828 aaKnown RBP25.46■■□□□ 1.67
CCNF-203ENST00000564236 BCANQ96GW7 911 aa25.45■■□□□ 1.66
CCNF-203ENST00000564236 CHGAP10645 457 aaKnown RBP25.44■■□□□ 1.66
CCNF-203ENST00000564236 MSH6P52701 1360 aa25.43■■□□□ 1.66
CCNF-203ENST00000564236 SPHKAPQ2M3C7 1700 aa25.42■■□□□ 1.66
CCNF-203ENST00000564236 HFM1A2PYH4 1435 aa25.41■■□□□ 1.66
CCNF-203ENST00000564236 RBM33Q96EV2 1170 aaKnown RBP25.39■■□□□ 1.66
CCNF-203ENST00000564236 TRPM2O94759 1503 aa25.38■■□□□ 1.65
CCNF-203ENST00000564236 SETBP1Q9Y6X0 1596 aa25.38■■□□□ 1.65
CCNF-203ENST00000564236 ROBO1Q9Y6N7 1651 aa25.37■■□□□ 1.65
CCNF-203ENST00000564236 NUTM2DQ5VT03 806 aaPredicted RBP25.35■■□□□ 1.65
CCNF-203ENST00000564236 SLAIN2Q9P270 581 aa25.34■■□□□ 1.65
CCNF-203ENST00000564236 NRXN3Q9Y4C0 1643 aa25.34■■□□□ 1.65
CCNF-203ENST00000564236 PTPRUQ92729 1446 aa25.33■■□□□ 1.65
CCNF-203ENST00000564236 CLTCL1P53675 1640 aa25.33■■□□□ 1.65
CCNF-203ENST00000564236 SENP3Q9H4L4 574 aaPredicted RBP25.32■■□□□ 1.64
CCNF-203ENST00000564236 NEXMIFQ5QGS0 1516 aa25.3■■□□□ 1.64
CCNF-203ENST00000564236 PHF23Q9BUL5 403 aaPredicted RBP25.29■■□□□ 1.64
CCNF-203ENST00000564236 C19orf44Q9H6X5 657 aa25.29■■□□□ 1.64
CCNF-203ENST00000564236 AMOTL2Q9Y2J4 779 aa25.28■■□□□ 1.64
CCNF-203ENST00000564236 XRN1Q8IZH2 1706 aaKnown RBP25.28■■□□□ 1.64
CCNF-203ENST00000564236 CADPS2Q86UW7 1296 aa25.26■■□□□ 1.63
CCNF-203ENST00000564236 DCCP43146 1447 aa25.26■■□□□ 1.63
CCNF-203ENST00000564236 ZNF326Q5BKZ1 582 aaKnown RBP25.24■■□□□ 1.63
CCNF-203ENST00000564236 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.23■■□□□ 1.63
CCNF-203ENST00000564236 METP08581 1390 aa25.23■■□□□ 1.63
CCNF-203ENST00000564236 RGS17Q9UGC6 210 aaPredicted RBP25.23■■□□□ 1.63
CCNF-203ENST00000564236 COL16A1Q07092 1604 aaPredicted RBP25.19■■□□□ 1.62
CCNF-203ENST00000564236 AHDC1Q5TGY3 1603 aaPredicted RBP25.19■■□□□ 1.62
CCNF-203ENST00000564236 JCADQ9P266 1359 aa25.19■■□□□ 1.62
CCNF-203ENST00000564236 ATF3P18847 181 aa25.19■■□□□ 1.62
CCNF-203ENST00000564236 C14orf37Q86TY3 774 aa25.19■■□□□ 1.62
CCNF-203ENST00000564236 TRIM52Q96A61 297 aa25.19■■□□□ 1.62
CCNF-203ENST00000564236 SLC4A1APQ9BWU0 796 aaKnown RBP25.19■■□□□ 1.62
CCNF-203ENST00000564236 RPGRIP1LQ68CZ1 1315 aa25.18■■□□□ 1.62
CCNF-203ENST00000564236 PHLPP1O60346 1717 aa25.18■■□□□ 1.62
CCNF-203ENST00000564236 KIF1BO60333 1816 aa25.18■■□□□ 1.62
CCNF-203ENST00000564236 PRAG1Q86YV5 1406 aa25.18■■□□□ 1.62
CCNF-203ENST00000564236 VGFO15240 615 aaPredicted RBP25.16■■□□□ 1.62
CCNF-203ENST00000564236 PTCH1Q13635 1447 aa25.12■■□□□ 1.61
CCNF-203ENST00000564236 ADGRL3Q9HAR2 1447 aa25.12■■□□□ 1.61
CCNF-203ENST00000564236 MST1RQ04912 1400 aa25.12■■□□□ 1.61
CCNF-203ENST00000564236 BRINP3Q76B58 766 aa25.11■■□□□ 1.61
CCNF-203ENST00000564236 SETD1AO15047 1707 aaKnown RBP25.11■■□□□ 1.61
CCNF-203ENST00000564236 SPATA31A6Q5VVP1 1343 aa25.1■■□□□ 1.61
CCNF-203ENST00000564236 ACIN1Q9UKV3 1341 aaKnown RBP25.09■■□□□ 1.61
CCNF-203ENST00000564236 ASXL1Q8IXJ9 1541 aa25.07■■□□□ 1.6
CCNF-203ENST00000564236 PPLO60437 1756 aa25.05■■□□□ 1.6
CCNF-203ENST00000564236 SPATA31E1Q6ZUB1 1445 aa25.05■■□□□ 1.6
CCNF-203ENST00000564236 SHPRHQ149N8 1683 aa25.05■■□□□ 1.6
CCNF-203ENST00000564236 POTEAQ6S8J7 498 aa25.05■■□□□ 1.6
CCNF-203ENST00000564236 CCDC144AA2RUR9 1427 aa25.04■■□□□ 1.6
CCNF-203ENST00000564236 SETD5Q9C0A6 1442 aa25.04■■□□□ 1.6
CCNF-203ENST00000564236 MPHOSPH9Q99550 1183 aa25.04■■□□□ 1.6
CCNF-203ENST00000564236 NALCNQ8IZF0 1738 aa25.03■■□□□ 1.6
CCNF-203ENST00000564236 LRP6O75581 1613 aa25.03■■□□□ 1.6
CCNF-203ENST00000564236 ROBO2Q9HCK4 1378 aa25.03■■□□□ 1.6
CCNF-203ENST00000564236 FOXD1Q16676 465 aa25.02■■□□□ 1.6
CCNF-203ENST00000564236 NHSL1Q5SYE7 1610 aa25.01■■□□□ 1.59
CCNF-203ENST00000564236 ANKRD30BQ9BXX2 1392 aa24.99■■□□□ 1.59
CCNF-203ENST00000564236 C1orf167Q5SNV9 1468 aa24.97■■□□□ 1.59
CCNF-203ENST00000564236 LAMC1P11047 1609 aa24.97■■□□□ 1.59
CCNF-203ENST00000564236 TECPR2O15040 1411 aa24.95■■□□□ 1.59
CCNF-203ENST00000564236 ADGRF5Q8IZF2 1346 aa24.95■■□□□ 1.58
CCNF-203ENST00000564236 IFT172Q9UG01 1749 aa24.94■■□□□ 1.58
CCNF-203ENST00000564236 LRRC59Q96AG4 307 aaKnown RBP24.93■■□□□ 1.58
CCNF-203ENST00000564236 PIK3C2GO75747 1445 aa24.93■■□□□ 1.58
CCNF-203ENST00000564236 CDC42BPGQ6DT37 1551 aa24.89■■□□□ 1.58
CCNF-203ENST00000564236 ZNF772Q68DY9 489 aaPredicted RBP24.89■■□□□ 1.58
CCNF-203ENST00000564236 LRPPRCP42704 1394 aaKnown RBP24.89■■□□□ 1.57
CCNF-203ENST00000564236 ABCC11Q96J66 1382 aa24.89■■□□□ 1.57
CCNF-203ENST00000564236 RGL3Q3MIN7 710 aa24.88■■□□□ 1.57
CCNF-203ENST00000564236 PNPLA6Q8IY17 1366 aa24.88■■□□□ 1.57
CCNF-203ENST00000564236 NRXN1Q9ULB1 1477 aa24.87■■□□□ 1.57
CCNF-203ENST00000564236 SOS2Q07890 1332 aaPredicted RBP24.86■■□□□ 1.57
CCNF-203ENST00000564236 MEX3CQ5U5Q3 659 aaKnown RBP24.86■■□□□ 1.57
CCNF-203ENST00000564236 RAB3GAP2Q9H2M9 1393 aa24.85■■□□□ 1.57
CCNF-203ENST00000564236 MYOM2P54296 1465 aa24.84■■□□□ 1.57
CCNF-203ENST00000564236 DDX17Q92841 729 aaKnown RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms