RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 BRD1O95696 1058 aa7.45□□□□□ -1.22
TUBGCP4-207ENST00000563963 BRPF1P55201 1214 aaPredicted RBP7.45□□□□□ -1.22
TUBGCP4-207ENST00000563963 PAK3O75914 559 aaPredicted RBP7.44□□□□□ -1.22
TUBGCP4-207ENST00000563963 WDR78Q5VTH9 848 aa7.44□□□□□ -1.22
TUBGCP4-207ENST00000563963 NGEFQ8N5V2 710 aa7.44□□□□□ -1.22
TUBGCP4-207ENST00000563963 CCDC96Q2M329 555 aa7.44□□□□□ -1.22
TUBGCP4-207ENST00000563963 CCDC125Q86Z20 511 aa7.44□□□□□ -1.22
TUBGCP4-207ENST00000563963 BSDC1Q9NW68 430 aaPredicted RBP7.44□□□□□ -1.22
TUBGCP4-207ENST00000563963 CCER2I3L3R5 266 aa7.44□□□□□ -1.22
TUBGCP4-207ENST00000563963 MYBPC2Q14324 1141 aa7.44□□□□□ -1.22
TUBGCP4-207ENST00000563963 ZRSR2Q15696 482 aaKnown RBP7.44□□□□□ -1.22
TUBGCP4-207ENST00000563963 ANKRD13AQ8IZ07 590 aa7.44□□□□□ -1.22
TUBGCP4-207ENST00000563963 CCDC97Q96F63 343 aaPredicted RBP7.44□□□□□ -1.22
TUBGCP4-207ENST00000563963 GZF1Q9H116 711 aaPredicted RBP7.44□□□□□ -1.22
TUBGCP4-207ENST00000563963 MPHOSPH10O00566 681 aaKnown RBP7.43□□□□□ -1.22
TUBGCP4-207ENST00000563963 ZKSCAN8Q15776 578 aaPredicted RBP7.43□□□□□ -1.22
TUBGCP4-207ENST00000563963 NBPF10Q6P3W6 841 aaKnown RBP7.43□□□□□ -1.22
TUBGCP4-207ENST00000563963 POLA1P09884 1462 aaPredicted RBP7.43□□□□□ -1.22
TUBGCP4-207ENST00000563963 DCAF8L1A6NGE4 600 aa7.43□□□□□ -1.22
TUBGCP4-207ENST00000563963 ZNF608Q9ULD9 1512 aaPredicted RBP7.43□□□□□ -1.22
TUBGCP4-207ENST00000563963 TPD52L2O43399 206 aaKnown RBP7.42□□□□□ -1.22
TUBGCP4-207ENST00000563963 TMX4Q9H1E5 349 aaPredicted RBP7.42□□□□□ -1.22
TUBGCP4-207ENST00000563963 WRNQ14191 1432 aaPredicted RBP eCLIP7.42□□□□□ -1.22
TUBGCP4-207ENST00000563963 DHX16O60231 1041 aaKnown RBP7.42□□□□□ -1.22
TUBGCP4-207ENST00000563963 MYCBPQ99417 103 aaPredicted RBP7.42□□□□□ -1.22
TUBGCP4-207ENST00000563963 IRF6O14896 467 aa7.41□□□□□ -1.22
TUBGCP4-207ENST00000563963 APBB1IPQ7Z5R6 666 aaPredicted RBP7.41□□□□□ -1.22
TUBGCP4-207ENST00000563963 RBM27Q9P2N5 1060 aaKnown RBP7.41□□□□□ -1.22
TUBGCP4-207ENST00000563963 CCDC66A2RUB6 948 aa7.41□□□□□ -1.22
TUBGCP4-207ENST00000563963 CCDC181Q5TID7 509 aa7.41□□□□□ -1.22
TUBGCP4-207ENST00000563963 MSL3Q8N5Y2 521 aaKnown RBP7.41□□□□□ -1.22
TUBGCP4-207ENST00000563963 SUDS3Q9H7L9 328 aaPredicted RBP7.41□□□□□ -1.22
TUBGCP4-207ENST00000563963 CEP83Q9Y592 693 aa7.41□□□□□ -1.22
TUBGCP4-207ENST00000563963 SMARCA5O60264 1052 aaPredicted RBP7.41□□□□□ -1.22
TUBGCP4-207ENST00000563963 PIAS4Q8N2W9 510 aaPredicted RBP7.41□□□□□ -1.22
TUBGCP4-207ENST00000563963 TSPAN18Q96SJ8 248 aa7.41□□□□□ -1.22
TUBGCP4-207ENST00000563963 SNAPC4Q5SXM2 1469 aa7.41□□□□□ -1.22
TUBGCP4-207ENST00000563963 SOGA1O94964 1423 aa7.41□□□□□ -1.22
TUBGCP4-207ENST00000563963 ERCC3P19447 782 aa7.4□□□□□ -1.22
TUBGCP4-207ENST00000563963 RGL3Q3MIN7 710 aa7.4□□□□□ -1.22
TUBGCP4-207ENST00000563963 CGNQ9P2M7 1197 aaKnown RBP7.4□□□□□ -1.22
TUBGCP4-207ENST00000563963 SHROOM2Q13796 1616 aa7.4□□□□□ -1.22
TUBGCP4-207ENST00000563963 HNRNPUL2Q1KMD3 747 aaKnown RBP7.4□□□□□ -1.22
TUBGCP4-207ENST00000563963 FEZ2Q9UHY8 353 aaPredicted RBP7.4□□□□□ -1.22
TUBGCP4-207ENST00000563963 ABCA5Q8WWZ7 1642 aa7.4□□□□□ -1.23
TUBGCP4-207ENST00000563963 SPATA31D1Q6ZQQ2 1576 aa7.4□□□□□ -1.23
TUBGCP4-207ENST00000563963 ABCA10Q8WWZ4 1543 aa7.39□□□□□ -1.23
TUBGCP4-207ENST00000563963 CXorf38Q8TB03 319 aa7.39□□□□□ -1.23
TUBGCP4-207ENST00000563963 MARCH6O60337 910 aa7.39□□□□□ -1.23
TUBGCP4-207ENST00000563963 ZRANB2O95218 330 aaKnown RBP eCLIP7.39□□□□□ -1.23
TUBGCP4-207ENST00000563963 CREBRFQ8IUR6 639 aa7.39□□□□□ -1.23
TUBGCP4-207ENST00000563963 FRMD4BQ9Y2L6 1034 aa7.39□□□□□ -1.23
TUBGCP4-207ENST00000563963 NUB1Q9Y5A7 615 aa7.39□□□□□ -1.23
TUBGCP4-207ENST00000563963 TDO2P48775 406 aa7.38□□□□□ -1.23
TUBGCP4-207ENST00000563963 FRAT1Q92837 279 aaPredicted RBP7.38□□□□□ -1.23
TUBGCP4-207ENST00000563963 EFCC1Q9HA90 598 aa7.38□□□□□ -1.23
TUBGCP4-207ENST00000563963 RRAGDQ9NQL2 400 aaPredicted RBP7.38□□□□□ -1.23
TUBGCP4-207ENST00000563963 GOLGA6CA6NDK9 693 aa7.38□□□□□ -1.23
TUBGCP4-207ENST00000563963 GOLGA6BA6NDN3 693 aa7.38□□□□□ -1.23
TUBGCP4-207ENST00000563963 GOLGA6DP0CG33 693 aa7.38□□□□□ -1.23
TUBGCP4-207ENST00000563963 GOLGA6AQ9NYA3 693 aa7.38□□□□□ -1.23
TUBGCP4-207ENST00000563963 SPINK5Q9NQ38 1064 aaPredicted RBP7.38□□□□□ -1.23
TUBGCP4-207ENST00000563963 CEP162Q5TB80 1403 aa7.37□□□□□ -1.23
TUBGCP4-207ENST00000563963 GAPVD1Q14C86 1478 aa7.37□□□□□ -1.23
TUBGCP4-207ENST00000563963 FBXW7Q969H0 707 aa7.37□□□□□ -1.23
TUBGCP4-207ENST00000563963 MNS1Q8NEH6 495 aa7.37□□□□□ -1.23
TUBGCP4-207ENST00000563963 ERICH3Q5RHP9 1530 aa7.37□□□□□ -1.23
TUBGCP4-207ENST00000563963 MTA1Q13330 715 aa7.37□□□□□ -1.23
TUBGCP4-207ENST00000563963 ZNF280DQ6N043 979 aa7.37□□□□□ -1.23
TUBGCP4-207ENST00000563963 SPRYD3Q8NCJ5 442 aa7.37□□□□□ -1.23
TUBGCP4-207ENST00000563963 RNF217Q8TC41 542 aa7.37□□□□□ -1.23
TUBGCP4-207ENST00000563963 MTA3Q9BTC8 594 aa7.37□□□□□ -1.23
TUBGCP4-207ENST00000563963 FAM13BQ9NYF5 915 aa7.37□□□□□ -1.23
TUBGCP4-207ENST00000563963 CCDC172P0C7W6 258 aa7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 CTR9Q6PD62 1173 aa7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 FGD5Q6ZNL6 1462 aa7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 ADAMTS12P58397 1594 aa7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 ZCRB1Q8TBF4 217 aaKnown RBP7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 FAM210AQ96ND0 272 aa7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 NBPF3Q9H094 633 aa7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 ANAPC4Q9UJX5 808 aa7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 EEA1Q15075 1411 aa7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 FOXD4Q12950 439 aaPredicted RBP7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 PIK3R5Q8WYR1 880 aa7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 TNIKQ9UKE5 1360 aa7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 ZNF853P0CG23 659 aa7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 CCDC94Q9BW85 323 aaPredicted RBP7.36□□□□□ -1.23
TUBGCP4-207ENST00000563963 KRBA2Q6ZNG9 492 aa7.35□□□□□ -1.23
TUBGCP4-207ENST00000563963 MAPKBP1O60336 1514 aa7.35□□□□□ -1.23
TUBGCP4-207ENST00000563963 IPO8O15397 1037 aaKnown RBP7.35□□□□□ -1.23
TUBGCP4-207ENST00000563963 KCNJ4P48050 445 aa7.35□□□□□ -1.23
TUBGCP4-207ENST00000563963 TERF1P54274 439 aa7.35□□□□□ -1.23
TUBGCP4-207ENST00000563963 HIRIP3Q9BW71 556 aaPredicted RBP7.35□□□□□ -1.23
TUBGCP4-207ENST00000563963 NUP160Q12769 1436 aa7.35□□□□□ -1.23
TUBGCP4-207ENST00000563963 CHMP7Q8WUX9 453 aaPredicted RBP7.35□□□□□ -1.23
TUBGCP4-207ENST00000563963 LIG1P18858 919 aa7.34□□□□□ -1.23
TUBGCP4-207ENST00000563963 NAP1L1P55209 391 aaKnown RBP7.34□□□□□ -1.23
TUBGCP4-207ENST00000563963 SMC4Q9NTJ3 1288 aa7.34□□□□□ -1.23
TUBGCP4-207ENST00000563963 PPME1Q9Y570 386 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms