RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 IDI1Q13907 227 aa22.1■■□□□ 1.13
PDXDC1-209ENST00000563667 NEURL4Q96JN8 1562 aa22.1■■□□□ 1.13
PDXDC1-209ENST00000563667 SPATA31E1Q6ZUB1 1445 aa22.09■■□□□ 1.13
PDXDC1-209ENST00000563667 ZNF326Q5BKZ1 582 aaKnown RBP22.09■■□□□ 1.13
PDXDC1-209ENST00000563667 LTBP4Q8N2S1 1624 aa22.09■■□□□ 1.13
PDXDC1-209ENST00000563667 UBR1Q8IWV7 1749 aa22.09■■□□□ 1.13
PDXDC1-209ENST00000563667 EID1Q9Y6B2 187 aa22.08■■□□□ 1.13
PDXDC1-209ENST00000563667 KIF1BO60333 1816 aa22.08■■□□□ 1.12
PDXDC1-209ENST00000563667 PIK3C2BO00750 1634 aa22.07■■□□□ 1.12
PDXDC1-209ENST00000563667 TXNDC2Q86VQ3 553 aa22.07■■□□□ 1.12
PDXDC1-209ENST00000563667 MED14O60244 1454 aa22.05■■□□□ 1.12
PDXDC1-209ENST00000563667 SCAF11Q99590 1463 aaKnown RBP22.04■■□□□ 1.12
PDXDC1-209ENST00000563667 NBPF8Q3BBV2 869 aa22.03■■□□□ 1.12
PDXDC1-209ENST00000563667 TMEM2Q9UHN6 1383 aa22.02■■□□□ 1.12
PDXDC1-209ENST00000563667 SLIT1O75093 1534 aa22.02■■□□□ 1.12
PDXDC1-209ENST00000563667 LTKP29376 864 aa22.02■■□□□ 1.12
PDXDC1-209ENST00000563667 ILDR2Q71H61 639 aa22.02■■□□□ 1.12
PDXDC1-209ENST00000563667 ARHGAP23Q9P227 1491 aa22.02■■□□□ 1.12
PDXDC1-209ENST00000563667 ADGRB3O60242 1522 aa22.01■■□□□ 1.11
PDXDC1-209ENST00000563667 IQGAP1P46940 1657 aa22.01■■□□□ 1.11
PDXDC1-209ENST00000563667 IQSEC2Q5JU85 1478 aa21.98■■□□□ 1.11
PDXDC1-209ENST00000563667 STAC3Q96MF2 364 aa21.98■■□□□ 1.11
PDXDC1-209ENST00000563667 SOCS7O14512 581 aa21.97■■□□□ 1.11
PDXDC1-209ENST00000563667 RPGRIP1LQ68CZ1 1315 aa21.97■■□□□ 1.11
PDXDC1-209ENST00000563667 KDM5AP29375 1690 aaKnown RBP21.96■■□□□ 1.11
PDXDC1-209ENST00000563667 BCANQ96GW7 911 aa21.96■■□□□ 1.11
PDXDC1-209ENST00000563667 CPS1P31327 1500 aa21.95■■□□□ 1.1
PDXDC1-209ENST00000563667 TMEM131LA2VDJ0 1609 aa21.95■■□□□ 1.1
PDXDC1-209ENST00000563667 PRAG1Q86YV5 1406 aa21.94■■□□□ 1.1
PDXDC1-209ENST00000563667 UBAP1LF5GYI3 381 aa21.93■■□□□ 1.1
PDXDC1-209ENST00000563667 HDGFP51858 240 aaKnown RBP21.93■■□□□ 1.1
PDXDC1-209ENST00000563667 DISP3Q9P2K9 1392 aa21.92■■□□□ 1.1
PDXDC1-209ENST00000563667 NUTM2DQ5VT03 806 aaPredicted RBP21.92■■□□□ 1.1
PDXDC1-209ENST00000563667 SENP3Q9H4L4 574 aaPredicted RBP21.92■■□□□ 1.1
PDXDC1-209ENST00000563667 ADGRF5Q8IZF2 1346 aa21.9■■□□□ 1.1
PDXDC1-209ENST00000563667 MYOM2P54296 1465 aa21.9■■□□□ 1.1
PDXDC1-209ENST00000563667 MYO5BQ9ULV0 1848 aa21.9■■□□□ 1.1
PDXDC1-209ENST00000563667 RIMS2Q9UQ26 1411 aa21.89■■□□□ 1.1
PDXDC1-209ENST00000563667 VGFO15240 615 aaPredicted RBP21.89■■□□□ 1.09
PDXDC1-209ENST00000563667 IFT172Q9UG01 1749 aa21.89■■□□□ 1.09
PDXDC1-209ENST00000563667 ZNF316A6NFI3 1004 aaPredicted RBP21.88■■□□□ 1.09
PDXDC1-209ENST00000563667 SLC26A8Q96RN1 970 aa21.88■■□□□ 1.09
PDXDC1-209ENST00000563667 PPLO60437 1756 aa21.88■■□□□ 1.09
PDXDC1-209ENST00000563667 RALGAPBQ86X10 1494 aa21.88■■□□□ 1.09
PDXDC1-209ENST00000563667 NEXMIFQ5QGS0 1516 aa21.87■■□□□ 1.09
PDXDC1-209ENST00000563667 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.87■■□□□ 1.09
PDXDC1-209ENST00000563667 ROCK2O75116 1388 aaKnown RBP21.86■■□□□ 1.09
PDXDC1-209ENST00000563667 SCAF1Q9H7N4 1312 aaKnown RBP21.85■■□□□ 1.09
PDXDC1-209ENST00000563667 CARD11Q9BXL7 1154 aa21.85■■□□□ 1.09
PDXDC1-209ENST00000563667 ZFYVE9O95405 1425 aa21.85■■□□□ 1.09
PDXDC1-209ENST00000563667 TRPM1Q7Z4N2 1603 aa21.84■■□□□ 1.09
PDXDC1-209ENST00000563667 TOM1O60784 492 aa21.83■■□□□ 1.09
PDXDC1-209ENST00000563667 EIF4G2P78344 907 aaKnown RBP eCLIP21.83■■□□□ 1.09
PDXDC1-209ENST00000563667 NBPF1Q3BBV0 1214 aa21.83■■□□□ 1.09
PDXDC1-209ENST00000563667 PLEKHG1Q9ULL1 1385 aa21.83■■□□□ 1.08
PDXDC1-209ENST00000563667 HIRIP3Q9BW71 556 aaPredicted RBP21.82■■□□□ 1.08
PDXDC1-209ENST00000563667 LRRC7Q96NW7 1537 aa21.81■■□□□ 1.08
PDXDC1-209ENST00000563667 HSPA5P11021 654 aaKnown RBP21.81■■□□□ 1.08
PDXDC1-209ENST00000563667 PIP4K2BP78356 416 aa21.81■■□□□ 1.08
PDXDC1-209ENST00000563667 CFAP70Q5T0N1 1121 aa21.81■■□□□ 1.08
PDXDC1-209ENST00000563667 NRXN1Q9ULB1 1477 aa21.81■■□□□ 1.08
PDXDC1-209ENST00000563667 STRCP1A6NGW2 1772 aa21.79■■□□□ 1.08
PDXDC1-209ENST00000563667 KCNA6P17658 529 aa21.79■■□□□ 1.08
PDXDC1-209ENST00000563667 PIK3C2GO75747 1445 aa21.79■■□□□ 1.08
PDXDC1-209ENST00000563667 USP47Q96K76 1375 aa21.76■■□□□ 1.07
PDXDC1-209ENST00000563667 C14orf93Q9H972 538 aaKnown RBP21.76■■□□□ 1.07
PDXDC1-209ENST00000563667 GPRASP1Q5JY77 1395 aa21.75■■□□□ 1.07
PDXDC1-209ENST00000563667 KIAA1210Q9ULL0 1709 aa21.75■■□□□ 1.07
PDXDC1-209ENST00000563667 PROSER2Q86WR7 435 aaPredicted RBP21.74■■□□□ 1.07
PDXDC1-209ENST00000563667 TBX22Q9Y458 520 aa21.73■■□□□ 1.07
PDXDC1-209ENST00000563667 LAMC1P11047 1609 aa21.71■■□□□ 1.07
PDXDC1-209ENST00000563667 RBM33Q96EV2 1170 aaKnown RBP21.71■■□□□ 1.07
PDXDC1-209ENST00000563667 TMEM94Q12767 1356 aa21.71■■□□□ 1.07
PDXDC1-209ENST00000563667 TMEM132EQ6IEE7 984 aa21.69■■□□□ 1.06
PDXDC1-209ENST00000563667 ADAMTS13Q76LX8 1427 aa21.69■■□□□ 1.06
PDXDC1-209ENST00000563667 NKTRP30414 1462 aaKnown RBP21.68■■□□□ 1.06
PDXDC1-209ENST00000563667 DIP2AQ14689 1571 aa21.67■■□□□ 1.06
PDXDC1-209ENST00000563667 NWD1Q149M9 1564 aa21.67■■□□□ 1.06
PDXDC1-209ENST00000563667 ST20-MTHFSA0A0A6YYL1 179 aa21.67■■□□□ 1.06
PDXDC1-209ENST00000563667 SETBP1Q9Y6X0 1596 aa21.66■■□□□ 1.06
PDXDC1-209ENST00000563667 ALKQ9UM73 1620 aa21.66■■□□□ 1.06
PDXDC1-209ENST00000563667 HSPA1LP34931 641 aa21.64■■□□□ 1.05
PDXDC1-209ENST00000563667 C14orf37Q86TY3 774 aa21.64■■□□□ 1.05
PDXDC1-209ENST00000563667 EIF3AQ14152 1382 aaKnown RBP21.63■■□□□ 1.05
PDXDC1-209ENST00000563667 PIK3R4Q99570 1358 aa21.63■■□□□ 1.05
PDXDC1-209ENST00000563667 STK26Q9P289 416 aa21.63■■□□□ 1.05
PDXDC1-209ENST00000563667 TRAK1Q9UPV9 953 aa21.63■■□□□ 1.05
PDXDC1-209ENST00000563667 ADGRB1O14514 1584 aa21.62■■□□□ 1.05
PDXDC1-209ENST00000563667 AMOTL2Q9Y2J4 779 aa21.62■■□□□ 1.05
PDXDC1-209ENST00000563667 MSH6P52701 1360 aa21.61■■□□□ 1.05
PDXDC1-209ENST00000563667 XIRP1Q702N8 1843 aaKnown RBP21.59■■□□□ 1.05
PDXDC1-209ENST00000563667 CHD2O14647 1828 aaKnown RBP21.59■■□□□ 1.05
PDXDC1-209ENST00000563667 NRXN3Q9Y4C0 1643 aa21.58■■□□□ 1.05
PDXDC1-209ENST00000563667 ASXL1Q8IXJ9 1541 aa21.58■■□□□ 1.04
PDXDC1-209ENST00000563667 PTPRUQ92729 1446 aa21.56■■□□□ 1.04
PDXDC1-209ENST00000563667 YTHDC2Q9H6S0 1430 aaKnown RBP21.56■■□□□ 1.04
PDXDC1-209ENST00000563667 POLR3GLQ9BT43 218 aa21.56■■□□□ 1.04
PDXDC1-209ENST00000563667 METP08581 1390 aa21.56■■□□□ 1.04
PDXDC1-209ENST00000563667 C11orf95C9JLR9 678 aaPredicted RBP21.55■■□□□ 1.04
PDXDC1-209ENST00000563667 CENPJQ9HC77 1338 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms