RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
AC009088.3-201ENST00000563605 IQSEC2Q5JU85 1478 aa23.26■■□□□ 1.31
AC009088.3-201ENST00000563605 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.26■■□□□ 1.31
AC009088.3-201ENST00000563605 CPS1P31327 1500 aa23.26■■□□□ 1.31
AC009088.3-201ENST00000563605 MYO5BQ9ULV0 1848 aa23.24■■□□□ 1.31
AC009088.3-201ENST00000563605 ZFYVE9O95405 1425 aa23.24■■□□□ 1.31
AC009088.3-201ENST00000563605 SCAF1Q9H7N4 1312 aaKnown RBP23.23■■□□□ 1.31
AC009088.3-201ENST00000563605 PIP4K2BP78356 416 aa23.22■■□□□ 1.31
AC009088.3-201ENST00000563605 MPHOSPH9Q99550 1183 aa23.22■■□□□ 1.31
AC009088.3-201ENST00000563605 SETD5Q9C0A6 1442 aa23.21■■□□□ 1.31
AC009088.3-201ENST00000563605 PLEKHG1Q9ULL1 1385 aa23.2■■□□□ 1.3
AC009088.3-201ENST00000563605 SPHKAPQ2M3C7 1700 aa23.19■■□□□ 1.3
AC009088.3-201ENST00000563605 TOM1O60784 492 aa23.19■■□□□ 1.3
AC009088.3-201ENST00000563605 KCNA6P17658 529 aa23.19■■□□□ 1.3
AC009088.3-201ENST00000563605 RBM33Q96EV2 1170 aaKnown RBP23.18■■□□□ 1.3
AC009088.3-201ENST00000563605 STRCP1A6NGW2 1772 aa23.18■■□□□ 1.3
AC009088.3-201ENST00000563605 LRRC7Q96NW7 1537 aa23.18■■□□□ 1.3
AC009088.3-201ENST00000563605 PROSER2Q86WR7 435 aaPredicted RBP23.17■■□□□ 1.3
AC009088.3-201ENST00000563605 TBX22Q9Y458 520 aa23.15■■□□□ 1.3
AC009088.3-201ENST00000563605 TRPM2O94759 1503 aa23.14■■□□□ 1.3
AC009088.3-201ENST00000563605 CLTCL1P53675 1640 aa23.14■■□□□ 1.29
AC009088.3-201ENST00000563605 RAB3GAP2Q9H2M9 1393 aa23.14■■□□□ 1.29
AC009088.3-201ENST00000563605 TMEM94Q12767 1356 aa23.1■■□□□ 1.29
AC009088.3-201ENST00000563605 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
AC009088.3-201ENST00000563605 ADAMTS13Q76LX8 1427 aa23.08■■□□□ 1.28
AC009088.3-201ENST00000563605 RGL3Q3MIN7 710 aa23.07■■□□□ 1.28
AC009088.3-201ENST00000563605 VGFO15240 615 aaPredicted RBP23.04■■□□□ 1.28
AC009088.3-201ENST00000563605 AMOTL2Q9Y2J4 779 aa23.04■■□□□ 1.28
AC009088.3-201ENST00000563605 CCDC144AA2RUR9 1427 aa23.04■■□□□ 1.28
AC009088.3-201ENST00000563605 KIF1BO60333 1816 aa23.03■■□□□ 1.28
AC009088.3-201ENST00000563605 HSPA1LP34931 641 aa23.03■■□□□ 1.28
AC009088.3-201ENST00000563605 C14orf37Q86TY3 774 aa23.02■■□□□ 1.28
AC009088.3-201ENST00000563605 RPGRIP1LQ68CZ1 1315 aa23.02■■□□□ 1.28
AC009088.3-201ENST00000563605 NEXMIFQ5QGS0 1516 aa23■■□□□ 1.27
AC009088.3-201ENST00000563605 NKTRP30414 1462 aaKnown RBP22.98■■□□□ 1.27
AC009088.3-201ENST00000563605 METP08581 1390 aa22.98■■□□□ 1.27
AC009088.3-201ENST00000563605 PIK3R4Q99570 1358 aa22.98■■□□□ 1.27
AC009088.3-201ENST00000563605 NWD1Q149M9 1564 aa22.97■■□□□ 1.27
AC009088.3-201ENST00000563605 ALKQ9UM73 1620 aa22.97■■□□□ 1.27
AC009088.3-201ENST00000563605 PTPRUQ92729 1446 aa22.97■■□□□ 1.27
AC009088.3-201ENST00000563605 CHD2O14647 1828 aaKnown RBP22.96■■□□□ 1.27
AC009088.3-201ENST00000563605 XIRP1Q702N8 1843 aaKnown RBP22.96■■□□□ 1.27
AC009088.3-201ENST00000563605 HRCP23327 699 aa22.96■■□□□ 1.27
AC009088.3-201ENST00000563605 MSH6P52701 1360 aa22.96■■□□□ 1.27
AC009088.3-201ENST00000563605 DIP2AQ14689 1571 aa22.96■■□□□ 1.27
AC009088.3-201ENST00000563605 SETBP1Q9Y6X0 1596 aa22.94■■□□□ 1.26
AC009088.3-201ENST00000563605 NRXN3Q9Y4C0 1643 aa22.93■■□□□ 1.26
AC009088.3-201ENST00000563605 ADGRF5Q8IZF2 1346 aa22.93■■□□□ 1.26
AC009088.3-201ENST00000563605 SPATA31E1Q6ZUB1 1445 aa22.91■■□□□ 1.26
AC009088.3-201ENST00000563605 SLAIN2Q9P270 581 aa22.9■■□□□ 1.26
AC009088.3-201ENST00000563605 C19orf44Q9H6X5 657 aa22.89■■□□□ 1.25
AC009088.3-201ENST00000563605 ATF3P18847 181 aa22.88■■□□□ 1.25
AC009088.3-201ENST00000563605 ANKRD30BQ9BXX2 1392 aa22.87■■□□□ 1.25
AC009088.3-201ENST00000563605 DISP3Q9P2K9 1392 aa22.87■■□□□ 1.25
AC009088.3-201ENST00000563605 NCOA3Q9Y6Q9 1424 aa22.85■■□□□ 1.25
AC009088.3-201ENST00000563605 FAM135BQ49AJ0 1406 aa22.84■■□□□ 1.25
AC009088.3-201ENST00000563605 PPLO60437 1756 aa22.84■■□□□ 1.25
AC009088.3-201ENST00000563605 CADPS2Q86UW7 1296 aa22.84■■□□□ 1.25
AC009088.3-201ENST00000563605 STK26Q9P289 416 aa22.84■■□□□ 1.25
AC009088.3-201ENST00000563605 TMEM132EQ6IEE7 984 aa22.83■■□□□ 1.25
AC009088.3-201ENST00000563605 KDM2AQ9Y2K7 1162 aa22.82■■□□□ 1.24
AC009088.3-201ENST00000563605 XRN1Q8IZH2 1706 aaKnown RBP22.79■■□□□ 1.24
AC009088.3-201ENST00000563605 ROBO2Q9HCK4 1378 aa22.78■■□□□ 1.24
AC009088.3-201ENST00000563605 CFAP70Q5T0N1 1121 aa22.77■■□□□ 1.24
AC009088.3-201ENST00000563605 DCAF11Q8TEB1 546 aa22.77■■□□□ 1.24
AC009088.3-201ENST00000563605 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.76■■□□□ 1.23
AC009088.3-201ENST00000563605 ROBO1Q9Y6N7 1651 aa22.75■■□□□ 1.23
AC009088.3-201ENST00000563605 C14orf93Q9H972 538 aaKnown RBP22.74■■□□□ 1.23
AC009088.3-201ENST00000563605 PIK3C2GO75747 1445 aa22.74■■□□□ 1.23
AC009088.3-201ENST00000563605 WAPLQ7Z5K2 1190 aa22.73■■□□□ 1.23
AC009088.3-201ENST00000563605 SETD1AO15047 1707 aaKnown RBP22.73■■□□□ 1.23
AC009088.3-201ENST00000563605 IFT172Q9UG01 1749 aa22.72■■□□□ 1.23
AC009088.3-201ENST00000563605 ADGRL3Q9HAR2 1447 aa22.71■■□□□ 1.23
AC009088.3-201ENST00000563605 BRINP3Q76B58 766 aa22.7■■□□□ 1.22
AC009088.3-201ENST00000563605 PTCH1Q13635 1447 aa22.7■■□□□ 1.22
AC009088.3-201ENST00000563605 LRPPRCP42704 1394 aaKnown RBP22.69■■□□□ 1.22
AC009088.3-201ENST00000563605 TRIM26Q12899 539 aaPredicted RBP22.68■■□□□ 1.22
AC009088.3-201ENST00000563605 MYOM2P54296 1465 aa22.67■■□□□ 1.22
AC009088.3-201ENST00000563605 DCCP43146 1447 aa22.67■■□□□ 1.22
AC009088.3-201ENST00000563605 MST1RQ04912 1400 aa22.66■■□□□ 1.22
AC009088.3-201ENST00000563605 DHX57Q6P158 1386 aaKnown RBP22.66■■□□□ 1.22
AC009088.3-201ENST00000563605 ABCC11Q96J66 1382 aa22.66■■□□□ 1.22
AC009088.3-201ENST00000563605 ILDR2Q71H61 639 aa22.66■■□□□ 1.22
AC009088.3-201ENST00000563605 PHF23Q9BUL5 403 aaPredicted RBP22.66■■□□□ 1.22
AC009088.3-201ENST00000563605 NRXN1Q9ULB1 1477 aa22.66■■□□□ 1.22
AC009088.3-201ENST00000563605 YTHDC2Q9H6S0 1430 aaKnown RBP22.65■■□□□ 1.22
AC009088.3-201ENST00000563605 PLEKHH1Q9ULM0 1364 aa22.64■■□□□ 1.22
AC009088.3-201ENST00000563605 ASXL1Q8IXJ9 1541 aa22.64■■□□□ 1.21
AC009088.3-201ENST00000563605 DDX17Q92841 729 aaKnown RBP22.64■■□□□ 1.21
AC009088.3-201ENST00000563605 NUTM2FA1L443 756 aa22.63■■□□□ 1.21
AC009088.3-201ENST00000563605 SAFB2Q14151 953 aaKnown RBP eCLIP22.63■■□□□ 1.21
AC009088.3-201ENST00000563605 SIN3AQ96ST3 1273 aa22.63■■□□□ 1.21
AC009088.3-201ENST00000563605 MED1Q15648 1581 aaPredicted RBP22.63■■□□□ 1.21
AC009088.3-201ENST00000563605 NALCNQ8IZF0 1738 aa22.62■■□□□ 1.21
AC009088.3-201ENST00000563605 NEUROD1Q13562 356 aa22.62■■□□□ 1.21
AC009088.3-201ENST00000563605 ORAI2Q96SN7 254 aa22.62■■□□□ 1.21
AC009088.3-201ENST00000563605 PRAG1Q86YV5 1406 aa22.62■■□□□ 1.21
AC009088.3-201ENST00000563605 PHLPP1O60346 1717 aa22.62■■□□□ 1.21
AC009088.3-201ENST00000563605 STAC3Q96MF2 364 aa22.61■■□□□ 1.21
AC009088.3-201ENST00000563605 TRAK1Q9UPV9 953 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms