RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 MYO5BQ9ULV0 1848 aa18.46■□□□□ 0.55
FANCA-210ENST00000563318 RAB3GAP2Q9H2M9 1393 aa18.46■□□□□ 0.55
FANCA-210ENST00000563318 CERKQ8TCT0 537 aa18.46■□□□□ 0.55
FANCA-210ENST00000563318 IQSEC2Q5JU85 1478 aa18.46■□□□□ 0.54
FANCA-210ENST00000563318 MAPK8IP2Q13387 824 aaPredicted RBP18.44■□□□□ 0.54
FANCA-210ENST00000563318 TXNDC2Q86VQ3 553 aa18.44■□□□□ 0.54
FANCA-210ENST00000563318 ACIN1Q9UKV3 1341 aaKnown RBP18.43■□□□□ 0.54
FANCA-210ENST00000563318 RIMS2Q9UQ26 1411 aa18.42■□□□□ 0.54
FANCA-210ENST00000563318 TRIM52Q96A61 297 aa18.42■□□□□ 0.54
FANCA-210ENST00000563318 STRCP1A6NGW2 1772 aa18.41■□□□□ 0.54
FANCA-210ENST00000563318 HRCP23327 699 aa18.41■□□□□ 0.54
FANCA-210ENST00000563318 MPHOSPH9Q99550 1183 aa18.4■□□□□ 0.54
FANCA-210ENST00000563318 PLEKHG1Q9ULL1 1385 aa18.4■□□□□ 0.54
FANCA-210ENST00000563318 CPS1P31327 1500 aa18.39■□□□□ 0.54
FANCA-210ENST00000563318 STAG3Q9UJ98 1225 aa18.39■□□□□ 0.53
FANCA-210ENST00000563318 EID1Q9Y6B2 187 aa18.39■□□□□ 0.53
FANCA-210ENST00000563318 ILDR1Q86SU0 546 aaPredicted RBP18.38■□□□□ 0.53
FANCA-210ENST00000563318 FBXO41Q8TF61 875 aa18.38■□□□□ 0.53
FANCA-210ENST00000563318 NEXMIFQ5QGS0 1516 aa18.38■□□□□ 0.53
FANCA-210ENST00000563318 ADAMTS13Q76LX8 1427 aa18.37■□□□□ 0.53
FANCA-210ENST00000563318 NWD1Q149M9 1564 aa18.35■□□□□ 0.53
FANCA-210ENST00000563318 NRXN3Q9Y4C0 1643 aa18.34■□□□□ 0.53
FANCA-210ENST00000563318 SPATA31E1Q6ZUB1 1445 aa18.34■□□□□ 0.53
FANCA-210ENST00000563318 SETBP1Q9Y6X0 1596 aa18.34■□□□□ 0.53
FANCA-210ENST00000563318 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.52
FANCA-210ENST00000563318 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.32■□□□□ 0.52
FANCA-210ENST00000563318 DIP2AQ14689 1571 aa18.32■□□□□ 0.52
FANCA-210ENST00000563318 KIF1BO60333 1816 aa18.31■□□□□ 0.52
FANCA-210ENST00000563318 ALKQ9UM73 1620 aa18.31■□□□□ 0.52
FANCA-210ENST00000563318 CHGAP10645 457 aaKnown RBP18.29■□□□□ 0.52
FANCA-210ENST00000563318 TBX22Q9Y458 520 aa18.29■□□□□ 0.52
FANCA-210ENST00000563318 CCDC144AA2RUR9 1427 aa18.29■□□□□ 0.52
FANCA-210ENST00000563318 ANKRD30BQ9BXX2 1392 aa18.29■□□□□ 0.52
FANCA-210ENST00000563318 HDGFP51858 240 aaKnown RBP18.28■□□□□ 0.52
FANCA-210ENST00000563318 SLC26A8Q96RN1 970 aa18.28■□□□□ 0.52
FANCA-210ENST00000563318 NKTRP30414 1462 aaKnown RBP18.27■□□□□ 0.52
FANCA-210ENST00000563318 ZBTB22O15209 634 aa18.27■□□□□ 0.52
FANCA-210ENST00000563318 XIRP1Q702N8 1843 aaKnown RBP18.26■□□□□ 0.51
FANCA-210ENST00000563318 KCNA6P17658 529 aa18.26■□□□□ 0.51
FANCA-210ENST00000563318 PIK3R4Q99570 1358 aa18.26■□□□□ 0.51
FANCA-210ENST00000563318 CHD2O14647 1828 aaKnown RBP18.26■□□□□ 0.51
FANCA-210ENST00000563318 RPGRIP1LQ68CZ1 1315 aa18.25■□□□□ 0.51
FANCA-210ENST00000563318 PPLO60437 1756 aa18.25■□□□□ 0.51
FANCA-210ENST00000563318 NUTM2DQ5VT03 806 aaPredicted RBP18.25■□□□□ 0.51
FANCA-210ENST00000563318 IFT172Q9UG01 1749 aa18.25■□□□□ 0.51
FANCA-210ENST00000563318 SETD1AO15047 1707 aaKnown RBP18.24■□□□□ 0.51
FANCA-210ENST00000563318 PTPRUQ92729 1446 aa18.23■□□□□ 0.51
FANCA-210ENST00000563318 PPP1R15AO75807 674 aaPredicted RBP18.23■□□□□ 0.51
FANCA-210ENST00000563318 XRN1Q8IZH2 1706 aaKnown RBP18.22■□□□□ 0.51
FANCA-210ENST00000563318 PRAG1Q86YV5 1406 aa18.21■□□□□ 0.51
FANCA-210ENST00000563318 ZNF326Q5BKZ1 582 aaKnown RBP18.2■□□□□ 0.5
FANCA-210ENST00000563318 NRXN1Q9ULB1 1477 aa18.2■□□□□ 0.5
FANCA-210ENST00000563318 METP08581 1390 aa18.19■□□□□ 0.5
FANCA-210ENST00000563318 TMEM94Q12767 1356 aa18.18■□□□□ 0.5
FANCA-210ENST00000563318 VGFO15240 615 aaPredicted RBP18.17■□□□□ 0.5
FANCA-210ENST00000563318 PIK3C2GO75747 1445 aa18.16■□□□□ 0.5
FANCA-210ENST00000563318 NCOA3Q9Y6Q9 1424 aa18.16■□□□□ 0.5
FANCA-210ENST00000563318 MYOM2P54296 1465 aa18.16■□□□□ 0.5
FANCA-210ENST00000563318 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
FANCA-210ENST00000563318 ADGRF5Q8IZF2 1346 aa18.15■□□□□ 0.5
FANCA-210ENST00000563318 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
FANCA-210ENST00000563318 UBAP1LF5GYI3 381 aa18.13■□□□□ 0.49
FANCA-210ENST00000563318 BCANQ96GW7 911 aa18.12■□□□□ 0.49
FANCA-210ENST00000563318 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
FANCA-210ENST00000563318 AMOTL2Q9Y2J4 779 aa18.11■□□□□ 0.49
FANCA-210ENST00000563318 DHX57Q6P158 1386 aaKnown RBP18.11■□□□□ 0.49
FANCA-210ENST00000563318 PTCH1Q13635 1447 aa18.11■□□□□ 0.49
FANCA-210ENST00000563318 RGL3Q3MIN7 710 aa18.1■□□□□ 0.49
FANCA-210ENST00000563318 PROSER2Q86WR7 435 aaPredicted RBP18.1■□□□□ 0.49
FANCA-210ENST00000563318 TECPR2O15040 1411 aa18.08■□□□□ 0.49
FANCA-210ENST00000563318 TOM1O60784 492 aa18.08■□□□□ 0.48
FANCA-210ENST00000563318 RBM33Q96EV2 1170 aaKnown RBP18.08■□□□□ 0.48
FANCA-210ENST00000563318 ROBO2Q9HCK4 1378 aa18.05■□□□□ 0.48
FANCA-210ENST00000563318 DCCP43146 1447 aa18.05■□□□□ 0.48
FANCA-210ENST00000563318 FAM135BQ49AJ0 1406 aa18.05■□□□□ 0.48
FANCA-210ENST00000563318 C14orf93Q9H972 538 aaKnown RBP18.04■□□□□ 0.48
FANCA-210ENST00000563318 ADGRB1O14514 1584 aa18.04■□□□□ 0.48
FANCA-210ENST00000563318 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.03■□□□□ 0.48
FANCA-210ENST00000563318 LAMC1P11047 1609 aa18.03■□□□□ 0.48
FANCA-210ENST00000563318 FOXD4L1Q9NU39 408 aa18.03■□□□□ 0.48
FANCA-210ENST00000563318 KNDC1Q76NI1 1749 aa18.03■□□□□ 0.48
FANCA-210ENST00000563318 MSH6P52701 1360 aa18.03■□□□□ 0.48
FANCA-210ENST00000563318 ADGRL3Q9HAR2 1447 aa18.02■□□□□ 0.48
FANCA-210ENST00000563318 LRPPRCP42704 1394 aaKnown RBP18.02■□□□□ 0.47
FANCA-210ENST00000563318 ABCC11Q96J66 1382 aa18.02■□□□□ 0.47
FANCA-210ENST00000563318 NALCNQ8IZF0 1738 aa18.01■□□□□ 0.47
FANCA-210ENST00000563318 STAC3Q96MF2 364 aa18.01■□□□□ 0.47
FANCA-210ENST00000563318 C19orf44Q9H6X5 657 aa18■□□□□ 0.47
FANCA-210ENST00000563318 YTHDC2Q9H6S0 1430 aaKnown RBP17.98■□□□□ 0.47
FANCA-210ENST00000563318 PIP4K2BP78356 416 aa17.98■□□□□ 0.47
FANCA-210ENST00000563318 ROBO1Q9Y6N7 1651 aa17.97■□□□□ 0.47
FANCA-210ENST00000563318 HSPA1LP34931 641 aa17.97■□□□□ 0.47
FANCA-210ENST00000563318 CFAP70Q5T0N1 1121 aa17.97■□□□□ 0.47
FANCA-210ENST00000563318 MST1RQ04912 1400 aa17.97■□□□□ 0.47
FANCA-210ENST00000563318 DLC1Q96QB1 1528 aa17.95■□□□□ 0.46
FANCA-210ENST00000563318 TMEM132EQ6IEE7 984 aa17.95■□□□□ 0.46
FANCA-210ENST00000563318 DCAF11Q8TEB1 546 aa17.95■□□□□ 0.46
FANCA-210ENST00000563318 SIRT1Q96EB6 747 aa17.95■□□□□ 0.46
FANCA-210ENST00000563318 SLAIN2Q9P270 581 aa17.95■□□□□ 0.46
FANCA-210ENST00000563318 CADPS2Q86UW7 1296 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms