RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 PPP1R15AO75807 674 aaPredicted RBP18.36■□□□□ 0.53
NSMCE1-204ENST00000563273 CHGAP10645 457 aaKnown RBP18.36■□□□□ 0.53
NSMCE1-204ENST00000563273 STRCP1A6NGW2 1772 aa18.35■□□□□ 0.53
NSMCE1-204ENST00000563273 TRPM2O94759 1503 aa18.35■□□□□ 0.53
NSMCE1-204ENST00000563273 SLC26A8Q96RN1 970 aa18.35■□□□□ 0.53
NSMCE1-204ENST00000563273 TBX22Q9Y458 520 aa18.35■□□□□ 0.53
NSMCE1-204ENST00000563273 NKTRP30414 1462 aaKnown RBP18.34■□□□□ 0.53
NSMCE1-204ENST00000563273 TRIM52Q96A61 297 aa18.34■□□□□ 0.53
NSMCE1-204ENST00000563273 SPHKAPQ2M3C7 1700 aa18.33■□□□□ 0.52
NSMCE1-204ENST00000563273 NWD1Q149M9 1564 aa18.33■□□□□ 0.52
NSMCE1-204ENST00000563273 PIK3R4Q99570 1358 aa18.32■□□□□ 0.52
NSMCE1-204ENST00000563273 SLC4A1APQ9BWU0 796 aaKnown RBP18.32■□□□□ 0.52
NSMCE1-204ENST00000563273 DIP2AQ14689 1571 aa18.31■□□□□ 0.52
NSMCE1-204ENST00000563273 ADAMTS13Q76LX8 1427 aa18.31■□□□□ 0.52
NSMCE1-204ENST00000563273 ALKQ9UM73 1620 aa18.31■□□□□ 0.52
NSMCE1-204ENST00000563273 BCANQ96GW7 911 aa18.3■□□□□ 0.52
NSMCE1-204ENST00000563273 TMEM94Q12767 1356 aa18.29■□□□□ 0.52
NSMCE1-204ENST00000563273 MYO5BQ9ULV0 1848 aa18.28■□□□□ 0.52
NSMCE1-204ENST00000563273 NCOA3Q9Y6Q9 1424 aa18.27■□□□□ 0.52
NSMCE1-204ENST00000563273 CLTCL1P53675 1640 aa18.27■□□□□ 0.51
NSMCE1-204ENST00000563273 PIP4K2BP78356 416 aa18.26■□□□□ 0.51
NSMCE1-204ENST00000563273 PROSER2Q86WR7 435 aaPredicted RBP18.26■□□□□ 0.51
NSMCE1-204ENST00000563273 SETD5Q9C0A6 1442 aa18.25■□□□□ 0.51
NSMCE1-204ENST00000563273 SETBP1Q9Y6X0 1596 aa18.25■□□□□ 0.51
NSMCE1-204ENST00000563273 ZNF326Q5BKZ1 582 aaKnown RBP18.24■□□□□ 0.51
NSMCE1-204ENST00000563273 RPGRIP1LQ68CZ1 1315 aa18.23■□□□□ 0.51
NSMCE1-204ENST00000563273 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
NSMCE1-204ENST00000563273 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
NSMCE1-204ENST00000563273 MPHOSPH9Q99550 1183 aa18.23■□□□□ 0.51
NSMCE1-204ENST00000563273 HSPA1LP34931 641 aa18.22■□□□□ 0.51
NSMCE1-204ENST00000563273 NEXMIFQ5QGS0 1516 aa18.22■□□□□ 0.51
NSMCE1-204ENST00000563273 FAM135BQ49AJ0 1406 aa18.21■□□□□ 0.51
NSMCE1-204ENST00000563273 CHD2O14647 1828 aaKnown RBP18.21■□□□□ 0.51
NSMCE1-204ENST00000563273 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
NSMCE1-204ENST00000563273 XIRP1Q702N8 1843 aaKnown RBP18.2■□□□□ 0.5
NSMCE1-204ENST00000563273 MSH6P52701 1360 aa18.19■□□□□ 0.5
NSMCE1-204ENST00000563273 CCDC144AA2RUR9 1427 aa18.18■□□□□ 0.5
NSMCE1-204ENST00000563273 NRXN3Q9Y4C0 1643 aa18.18■□□□□ 0.5
NSMCE1-204ENST00000563273 PTPRUQ92729 1446 aa18.17■□□□□ 0.5
NSMCE1-204ENST00000563273 HRCP23327 699 aa18.17■□□□□ 0.5
NSMCE1-204ENST00000563273 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
NSMCE1-204ENST00000563273 AMOTL2Q9Y2J4 779 aa18.17■□□□□ 0.5
NSMCE1-204ENST00000563273 RAB3GAP2Q9H2M9 1393 aa18.17■□□□□ 0.5
NSMCE1-204ENST00000563273 KIF1BO60333 1816 aa18.16■□□□□ 0.5
NSMCE1-204ENST00000563273 FOXD1Q16676 465 aa18.15■□□□□ 0.5
NSMCE1-204ENST00000563273 DISP3Q9P2K9 1392 aa18.15■□□□□ 0.5
NSMCE1-204ENST00000563273 SPATA31E1Q6ZUB1 1445 aa18.15■□□□□ 0.5
NSMCE1-204ENST00000563273 RBM33Q96EV2 1170 aaKnown RBP18.14■□□□□ 0.49
NSMCE1-204ENST00000563273 METP08581 1390 aa18.14■□□□□ 0.49
NSMCE1-204ENST00000563273 C19orf44Q9H6X5 657 aa18.13■□□□□ 0.49
NSMCE1-204ENST00000563273 DCCP43146 1447 aa18.12■□□□□ 0.49
NSMCE1-204ENST00000563273 PRAG1Q86YV5 1406 aa18.12■□□□□ 0.49
NSMCE1-204ENST00000563273 XRN1Q8IZH2 1706 aaKnown RBP18.12■□□□□ 0.49
NSMCE1-204ENST00000563273 CADPS2Q86UW7 1296 aa18.11■□□□□ 0.49
NSMCE1-204ENST00000563273 SLAIN2Q9P270 581 aa18.11■□□□□ 0.49
NSMCE1-204ENST00000563273 ANKRD30BQ9BXX2 1392 aa18.11■□□□□ 0.49
NSMCE1-204ENST00000563273 PTCH1Q13635 1447 aa18.08■□□□□ 0.49
NSMCE1-204ENST00000563273 ATF3P18847 181 aa18.07■□□□□ 0.48
NSMCE1-204ENST00000563273 C14orf37Q86TY3 774 aa18.07■□□□□ 0.48
NSMCE1-204ENST00000563273 PPLO60437 1756 aa18.05■□□□□ 0.48
NSMCE1-204ENST00000563273 ROBO1Q9Y6N7 1651 aa18.05■□□□□ 0.48
NSMCE1-204ENST00000563273 RGL3Q3MIN7 710 aa18.04■□□□□ 0.48
NSMCE1-204ENST00000563273 ADGRL3Q9HAR2 1447 aa18.04■□□□□ 0.48
NSMCE1-204ENST00000563273 MED1Q15648 1581 aaPredicted RBP18.04■□□□□ 0.48
NSMCE1-204ENST00000563273 ADGRF5Q8IZF2 1346 aa18.03■□□□□ 0.48
NSMCE1-204ENST00000563273 SETD1AO15047 1707 aaKnown RBP18.03■□□□□ 0.48
NSMCE1-204ENST00000563273 PIK3C2GO75747 1445 aa18.02■□□□□ 0.48
NSMCE1-204ENST00000563273 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.02■□□□□ 0.48
NSMCE1-204ENST00000563273 ROBO2Q9HCK4 1378 aa18■□□□□ 0.47
NSMCE1-204ENST00000563273 MYOM2P54296 1465 aa18■□□□□ 0.47
NSMCE1-204ENST00000563273 NRXN1Q9ULB1 1477 aa18■□□□□ 0.47
NSMCE1-204ENST00000563273 TECPR2O15040 1411 aa17.98■□□□□ 0.47
NSMCE1-204ENST00000563273 MST1RQ04912 1400 aa17.98■□□□□ 0.47
NSMCE1-204ENST00000563273 IFT172Q9UG01 1749 aa17.98■□□□□ 0.47
NSMCE1-204ENST00000563273 ILDR2Q71H61 639 aa17.98■□□□□ 0.47
NSMCE1-204ENST00000563273 LRPPRCP42704 1394 aaKnown RBP17.97■□□□□ 0.47
NSMCE1-204ENST00000563273 BRINP3Q76B58 766 aa17.97■□□□□ 0.47
NSMCE1-204ENST00000563273 STAC3Q96MF2 364 aa17.97■□□□□ 0.47
NSMCE1-204ENST00000563273 AHDC1Q5TGY3 1603 aaPredicted RBP17.97■□□□□ 0.47
NSMCE1-204ENST00000563273 ABCC11Q96J66 1382 aa17.96■□□□□ 0.47
NSMCE1-204ENST00000563273 JCADQ9P266 1359 aa17.96■□□□□ 0.47
NSMCE1-204ENST00000563273 C14orf93Q9H972 538 aaKnown RBP17.95■□□□□ 0.46
NSMCE1-204ENST00000563273 SIRT1Q96EB6 747 aa17.94■□□□□ 0.46
NSMCE1-204ENST00000563273 COL16A1Q07092 1604 aaPredicted RBP17.93■□□□□ 0.46
NSMCE1-204ENST00000563273 ASXL1Q8IXJ9 1541 aa17.93■□□□□ 0.46
NSMCE1-204ENST00000563273 NALCNQ8IZF0 1738 aa17.92■□□□□ 0.46
NSMCE1-204ENST00000563273 PHF23Q9BUL5 403 aaPredicted RBP17.91■□□□□ 0.46
NSMCE1-204ENST00000563273 PHLPP1O60346 1717 aa17.91■□□□□ 0.46
NSMCE1-204ENST00000563273 YTHDC2Q9H6S0 1430 aaKnown RBP17.9■□□□□ 0.46
NSMCE1-204ENST00000563273 C1orf167Q5SNV9 1468 aa17.9■□□□□ 0.46
NSMCE1-204ENST00000563273 LAMC1P11047 1609 aa17.9■□□□□ 0.46
NSMCE1-204ENST00000563273 SOCS7O14512 581 aa17.89■□□□□ 0.45
NSMCE1-204ENST00000563273 SPATA31A6Q5VVP1 1343 aa17.89■□□□□ 0.45
NSMCE1-204ENST00000563273 DHX57Q6P158 1386 aaKnown RBP17.89■□□□□ 0.45
NSMCE1-204ENST00000563273 CDC42BPGQ6DT37 1551 aa17.88■□□□□ 0.45
NSMCE1-204ENST00000563273 TMEM132EQ6IEE7 984 aa17.88■□□□□ 0.45
NSMCE1-204ENST00000563273 KNDC1Q76NI1 1749 aa17.87■□□□□ 0.45
NSMCE1-204ENST00000563273 CFAP70Q5T0N1 1121 aa17.87■□□□□ 0.45
NSMCE1-204ENST00000563273 STK26Q9P289 416 aa17.87■□□□□ 0.45
NSMCE1-204ENST00000563273 NHSL1Q5SYE7 1610 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 272.5 ms