RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, human

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA2-204	ENST00000563047	PROSER2	Q86WR7	435 aa	Predicted RBP	32.66	■■■□□ 2.82
GGA2-204	ENST00000563047	RBM33	Q96EV2	1170 aa	Known RBP	32.66	■■■□□ 2.82
GGA2-204	ENST00000563047	NWD1	Q149M9	1564 aa		32.66	■■■□□ 2.82
GGA2-204	ENST00000563047	FAM135B	Q49AJ0	1406 aa		32.65	■■■□□ 2.82
GGA2-204	ENST00000563047	TMEM131L	A2VDJ0	1609 aa		32.64	■■■□□ 2.82
GGA2-204	ENST00000563047	ROCK1	Q13464	1354 aa		32.64	■■■□□ 2.82
GGA2-204	ENST00000563047	BCAN	Q96GW7	911 aa		32.63	■■■□□ 2.81
GGA2-204	ENST00000563047	NKTR	P30414	1462 aa	Known RBP	32.62	■■■□□ 2.81
GGA2-204	ENST00000563047	RIMS2	Q9UQ26	1411 aa		32.62	■■■□□ 2.81
GGA2-204	ENST00000563047	PLEKHG1	Q9ULL1	1385 aa		32.61	■■■□□ 2.81
GGA2-204	ENST00000563047		E9PCH4	1651 aa		32.6	■■■□□ 2.81
GGA2-204	ENST00000563047	IQGAP3	Q86VI3	1631 aa		32.56	■■■□□ 2.8
GGA2-204	ENST00000563047	PPP1R15A	O75807	674 aa	Predicted RBP	32.56	■■■□□ 2.8
GGA2-204	ENST00000563047	HDGF	P51858	240 aa	Known RBP	32.56	■■■□□ 2.8
GGA2-204	ENST00000563047	ROBO1	Q9Y6N7	1651 aa		32.55	■■■□□ 2.8
GGA2-204	ENST00000563047	CHD2	O14647	1828 aa	Known RBP	32.54	■■■□□ 2.8
GGA2-204	ENST00000563047	CHGA	P10645	457 aa	Known RBP	32.54	■■■□□ 2.8
GGA2-204	ENST00000563047	MSH6	P52701	1360 aa		32.5	■■■□□ 2.79
GGA2-204	ENST00000563047	ITGAE	P38570	1179 aa		32.5	■■■□□ 2.79
GGA2-204	ENST00000563047	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.5	■■■□□ 2.79
GGA2-204	ENST00000563047	TBX22	Q9Y458	520 aa		32.5	■■■□□ 2.79
GGA2-204	ENST00000563047	NUP155	O75694	1391 aa		32.49	■■■□□ 2.79
GGA2-204	ENST00000563047	RGS17	Q9UGC6	210 aa	Predicted RBP	32.49	■■■□□ 2.79
GGA2-204	ENST00000563047	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.48	■■■□□ 2.79
GGA2-204	ENST00000563047	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.48	■■■□□ 2.79
GGA2-204	ENST00000563047	ADAMTS13	Q76LX8	1427 aa		32.46	■■■□□ 2.79
GGA2-204	ENST00000563047	SLAIN2	Q9P270	581 aa		32.44	■■■□□ 2.78
GGA2-204	ENST00000563047	DIP2A	Q14689	1571 aa		32.4	■■■□□ 2.78
GGA2-204	ENST00000563047	NCOA3	Q9Y6Q9	1424 aa		32.39	■■■□□ 2.78
GGA2-204	ENST00000563047	PIK3R4	Q99570	1358 aa		32.36	■■■□□ 2.77
GGA2-204	ENST00000563047	PHLPP1	O60346	1717 aa		32.35	■■■□□ 2.77
GGA2-204	ENST00000563047	SPHKAP	Q2M3C7	1700 aa		32.31	■■■□□ 2.76
GGA2-204	ENST00000563047	TRPM2	O94759	1503 aa		32.31	■■■□□ 2.76
GGA2-204	ENST00000563047	C14orf37	Q86TY3	774 aa		32.3	■■■□□ 2.76
GGA2-204	ENST00000563047	PTPRU	Q92729	1446 aa		32.3	■■■□□ 2.76
GGA2-204	ENST00000563047	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.29	■■■□□ 2.76
GGA2-204	ENST00000563047	POTEA	Q6S8J7	498 aa		32.28	■■■□□ 2.76
GGA2-204	ENST00000563047	AMOTL2	Q9Y2J4	779 aa		32.28	■■■□□ 2.76
GGA2-204	ENST00000563047	C19orf44	Q9H6X5	657 aa		32.27	■■■□□ 2.76
GGA2-204	ENST00000563047	COL16A1	Q07092	1604 aa	Predicted RBP	32.26	■■■□□ 2.76
GGA2-204	ENST00000563047	NRXN3	Q9Y4C0	1643 aa		32.26	■■■□□ 2.76
GGA2-204	ENST00000563047	JCAD	Q9P266	1359 aa		32.26	■■■□□ 2.75
GGA2-204	ENST00000563047	CADPS2	Q86UW7	1296 aa		32.25	■■■□□ 2.75
GGA2-204	ENST00000563047	RRBP1	Q9P2E9	1410 aa	Known RBP	32.24	■■■□□ 2.75
GGA2-204	ENST00000563047	SETBP1	Q9Y6X0	1596 aa		32.23	■■■□□ 2.75
GGA2-204	ENST00000563047	ATF3	P18847	181 aa		32.22	■■■□□ 2.75
GGA2-204	ENST00000563047	ZNF326	Q5BKZ1	582 aa	Known RBP	32.21	■■■□□ 2.75
GGA2-204	ENST00000563047	XRN1	Q8IZH2	1706 aa	Known RBP	32.19	■■■□□ 2.74
GGA2-204	ENST00000563047	CLTCL1	P53675	1640 aa		32.18	■■■□□ 2.74
GGA2-204	ENST00000563047	NAIP	Q13075	1403 aa		32.18	■■■□□ 2.74
GGA2-204	ENST00000563047	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.18	■■■□□ 2.74
GGA2-204	ENST00000563047	MET	P08581	1390 aa		32.15	■■■□□ 2.74
GGA2-204	ENST00000563047	NEXMIF	Q5QGS0	1516 aa		32.14	■■■□□ 2.74
GGA2-204	ENST00000563047	DCC	P43146	1447 aa		32.12	■■■□□ 2.73
GGA2-204	ENST00000563047	BRINP3	Q76B58	766 aa		32.12	■■■□□ 2.73
GGA2-204	ENST00000563047	LRP6	O75581	1613 aa		32.11	■■■□□ 2.73
GGA2-204	ENST00000563047	SPATA31A6	Q5VVP1	1343 aa		32.1	■■■□□ 2.73
GGA2-204	ENST00000563047	KIF1B	O60333	1816 aa		32.07	■■■□□ 2.73
GGA2-204	ENST00000563047	SHPRH	Q149N8	1683 aa		32.07	■■■□□ 2.72
GGA2-204	ENST00000563047	MST1R	Q04912	1400 aa		32.05	■■■□□ 2.72
GGA2-204	ENST00000563047	HFM1	A2PYH4	1435 aa		32.03	■■■□□ 2.72
GGA2-204	ENST00000563047	ASXL1	Q8IXJ9	1541 aa		32.03	■■■□□ 2.72
GGA2-204	ENST00000563047	TRIM52	Q96A61	297 aa		32.01	■■■□□ 2.71
GGA2-204	ENST00000563047	ADGRL3	Q9HAR2	1447 aa		32	■■■□□ 2.71
GGA2-204	ENST00000563047	MEX3C	Q5U5Q3	659 aa	Known RBP	32	■■■□□ 2.71
GGA2-204	ENST00000563047	SETD1A	O15047	1707 aa	Known RBP	31.98	■■■□□ 2.71
GGA2-204	ENST00000563047	NALCN	Q8IZF0	1738 aa		31.97	■■■□□ 2.71
GGA2-204	ENST00000563047	NHSL1	Q5SYE7	1610 aa		31.97	■■■□□ 2.71
GGA2-204	ENST00000563047	SETD5	Q9C0A6	1442 aa		31.95	■■■□□ 2.71
GGA2-204	ENST00000563047	VGF	O15240	615 aa	Predicted RBP	31.94	■■■□□ 2.7
GGA2-204	ENST00000563047	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.94	■■■□□ 2.7
GGA2-204	ENST00000563047	ZNF772	Q68DY9	489 aa	Predicted RBP	31.93	■■■□□ 2.7
GGA2-204	ENST00000563047	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.91	■■■□□ 2.7
GGA2-204	ENST00000563047	NUTM2E	B1AL46	878 aa	Predicted RBP	31.91	■■■□□ 2.7
GGA2-204	ENST00000563047	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.91	■■■□□ 2.7
GGA2-204	ENST00000563047	DDX17	Q92841	729 aa	Known RBP	31.9	■■■□□ 2.7
GGA2-204	ENST00000563047	RPGRIP1L	Q68CZ1	1315 aa		31.9	■■■□□ 2.7
GGA2-204	ENST00000563047	PTCH1	Q13635	1447 aa		31.9	■■■□□ 2.7
GGA2-204	ENST00000563047	LRRC59	Q96AG4	307 aa	Known RBP	31.88	■■■□□ 2.69
GGA2-204	ENST00000563047	ROBO2	Q9HCK4	1378 aa		31.88	■■■□□ 2.69
GGA2-204	ENST00000563047	PPL	O60437	1756 aa		31.86	■■■□□ 2.69
GGA2-204	ENST00000563047	C1orf167	Q5SNV9	1468 aa		31.86	■■■□□ 2.69
GGA2-204	ENST00000563047	PRAG1	Q86YV5	1406 aa		31.84	■■■□□ 2.69
GGA2-204	ENST00000563047	FOXD1	Q16676	465 aa		31.83	■■■□□ 2.69
GGA2-204	ENST00000563047	PNPLA6	Q8IY17	1366 aa		31.81	■■■□□ 2.68
GGA2-204	ENST00000563047	AFF2	P51816	1311 aa		31.79	■■■□□ 2.68
GGA2-204	ENST00000563047	RXRB	P28702	533 aa		31.78	■■■□□ 2.68
GGA2-204	ENST00000563047	LAMC1	P11047	1609 aa		31.78	■■■□□ 2.68
GGA2-204	ENST00000563047	ORAI2	Q96SN7	254 aa		31.77	■■■□□ 2.68
GGA2-204	ENST00000563047	ADGRF5	Q8IZF2	1346 aa		31.74	■■■□□ 2.67
GGA2-204	ENST00000563047	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.72	■■■□□ 2.67
GGA2-204	ENST00000563047	C8orf37	Q96NL8	207 aa		31.72	■■■□□ 2.67
GGA2-204	ENST00000563047	CCDC144A	A2RUR9	1427 aa		31.72	■■■□□ 2.67
GGA2-204	ENST00000563047	SOS2	Q07890	1332 aa	Predicted RBP	31.72	■■■□□ 2.67
GGA2-204	ENST00000563047	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.72	■■■□□ 2.67
GGA2-204	ENST00000563047	SPATA31E1	Q6ZUB1	1445 aa		31.7	■■■□□ 2.67
GGA2-204	ENST00000563047	RGL3	Q3MIN7	710 aa		31.69	■■■□□ 2.66
GGA2-204	ENST00000563047	MPHOSPH9	Q99550	1183 aa		31.69	■■■□□ 2.66
GGA2-204	ENST00000563047	IFT172	Q9UG01	1749 aa		31.66	■■■□□ 2.66
GGA2-204	ENST00000563047	QTRT2	Q9H974	415 aa	Known RBP	31.65	■■■□□ 2.66

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