RNA–Protein interactions for RNA: ENST00000562913.5

KLHDC4-210, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-210ENST00000562913 SENP3Q9H4L4 574 aaPredicted RBP24.88■■□□□ 1.57
KLHDC4-210ENST00000562913 RIMS2Q9UQ26 1411 aa24.87■■□□□ 1.57
KLHDC4-210ENST00000562913 BCANQ96GW7 911 aa24.87■■□□□ 1.57
KLHDC4-210ENST00000562913 XIRP1Q702N8 1843 aaKnown RBP24.86■■□□□ 1.57
KLHDC4-210ENST00000562913 NAIPQ13075 1403 aa24.86■■□□□ 1.57
KLHDC4-210ENST00000562913 PPP1R15AO75807 674 aaPredicted RBP24.85■■□□□ 1.57
KLHDC4-210ENST00000562913 HSPA1LP34931 641 aa24.85■■□□□ 1.57
KLHDC4-210ENST00000562913 KCNA6P17658 529 aa24.83■■□□□ 1.57
KLHDC4-210ENST00000562913 HDGFP51858 240 aaKnown RBP24.83■■□□□ 1.57
KLHDC4-210ENST00000562913 PLEKHG1Q9ULL1 1385 aa24.82■■□□□ 1.56
KLHDC4-210ENST00000562913 SPHKAPQ2M3C7 1700 aa24.81■■□□□ 1.56
KLHDC4-210ENST00000562913 NUTM2DQ5VT03 806 aaPredicted RBP24.8■■□□□ 1.56
KLHDC4-210ENST00000562913 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.79■■□□□ 1.56
KLHDC4-210ENST00000562913 TMEM94Q12767 1356 aa24.78■■□□□ 1.56
KLHDC4-210ENST00000562913 HFM1A2PYH4 1435 aa24.78■■□□□ 1.56
KLHDC4-210ENST00000562913 NWD1Q149M9 1564 aa24.77■■□□□ 1.56
KLHDC4-210ENST00000562913 PROSER2Q86WR7 435 aaPredicted RBP24.77■■□□□ 1.56
KLHDC4-210ENST00000562913 RBM33Q96EV2 1170 aaKnown RBP24.76■■□□□ 1.55
KLHDC4-210ENST00000562913 NKTRP30414 1462 aaKnown RBP24.74■■□□□ 1.55
KLHDC4-210ENST00000562913 CHD2O14647 1828 aaKnown RBP24.73■■□□□ 1.55
KLHDC4-210ENST00000562913 TRIM52Q96A61 297 aa24.73■■□□□ 1.55
KLHDC4-210ENST00000562913 TBX22Q9Y458 520 aa24.72■■□□□ 1.55
KLHDC4-210ENST00000562913 ILDR2Q71H61 639 aa24.71■■□□□ 1.55
KLHDC4-210ENST00000562913 ADAMTS13Q76LX8 1427 aa24.7■■□□□ 1.55
KLHDC4-210ENST00000562913 CLTCL1P53675 1640 aa24.69■■□□□ 1.54
KLHDC4-210ENST00000562913 TRPM2O94759 1503 aa24.69■■□□□ 1.54
KLHDC4-210ENST00000562913 ZNF326Q5BKZ1 582 aaKnown RBP24.68■■□□□ 1.54
KLHDC4-210ENST00000562913 DIP2AQ14689 1571 aa24.67■■□□□ 1.54
KLHDC4-210ENST00000562913 SLC4A1APQ9BWU0 796 aaKnown RBP24.64■■□□□ 1.54
KLHDC4-210ENST00000562913 MED1Q15648 1581 aaPredicted RBP24.63■■□□□ 1.53
KLHDC4-210ENST00000562913 MSH6P52701 1360 aa24.63■■□□□ 1.53
KLHDC4-210ENST00000562913 KIF1BO60333 1816 aa24.62■■□□□ 1.53
KLHDC4-210ENST00000562913 PIK3R4Q99570 1358 aa24.62■■□□□ 1.53
KLHDC4-210ENST00000562913 FAM135BQ49AJ0 1406 aa24.61■■□□□ 1.53
KLHDC4-210ENST00000562913 NRXN3Q9Y4C0 1643 aa24.61■■□□□ 1.53
KLHDC4-210ENST00000562913 SETBP1Q9Y6X0 1596 aa24.59■■□□□ 1.53
KLHDC4-210ENST00000562913 NEXMIFQ5QGS0 1516 aa24.59■■□□□ 1.53
KLHDC4-210ENST00000562913 ROBO1Q9Y6N7 1651 aa24.59■■□□□ 1.53
KLHDC4-210ENST00000562913 PTPRUQ92729 1446 aa24.58■■□□□ 1.53
KLHDC4-210ENST00000562913 AMOTL2Q9Y2J4 779 aa24.57■■□□□ 1.52
KLHDC4-210ENST00000562913 C14orf37Q86TY3 774 aa24.56■■□□□ 1.52
KLHDC4-210ENST00000562913 NCOA3Q9Y6Q9 1424 aa24.55■■□□□ 1.52
KLHDC4-210ENST00000562913 FOXD1Q16676 465 aa24.55■■□□□ 1.52
KLHDC4-210ENST00000562913 SLAIN2Q9P270 581 aa24.55■■□□□ 1.52
KLHDC4-210ENST00000562913 METP08581 1390 aa24.52■■□□□ 1.52
KLHDC4-210ENST00000562913 XRN1Q8IZH2 1706 aaKnown RBP24.51■■□□□ 1.51
KLHDC4-210ENST00000562913 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.5■■□□□ 1.51
KLHDC4-210ENST00000562913 SOCS7O14512 581 aa24.49■■□□□ 1.51
KLHDC4-210ENST00000562913 C19orf44Q9H6X5 657 aa24.49■■□□□ 1.51
KLHDC4-210ENST00000562913 MPHOSPH9Q99550 1183 aa24.48■■□□□ 1.51
KLHDC4-210ENST00000562913 PHF23Q9BUL5 403 aaPredicted RBP24.47■■□□□ 1.51
KLHDC4-210ENST00000562913 VGFO15240 615 aaPredicted RBP24.46■■□□□ 1.51
KLHDC4-210ENST00000562913 ATF3P18847 181 aa24.46■■□□□ 1.51
KLHDC4-210ENST00000562913 CADPS2Q86UW7 1296 aa24.46■■□□□ 1.51
KLHDC4-210ENST00000562913 RPGRIP1LQ68CZ1 1315 aa24.45■■□□□ 1.5
KLHDC4-210ENST00000562913 PPLO60437 1756 aa24.44■■□□□ 1.5
KLHDC4-210ENST00000562913 PHLPP1O60346 1717 aa24.44■■□□□ 1.5
KLHDC4-210ENST00000562913 CCDC144AA2RUR9 1427 aa24.44■■□□□ 1.5
KLHDC4-210ENST00000562913 SETD5Q9C0A6 1442 aa24.44■■□□□ 1.5
KLHDC4-210ENST00000562913 SETD1AO15047 1707 aaKnown RBP24.41■■□□□ 1.5
KLHDC4-210ENST00000562913 DCCP43146 1447 aa24.38■■□□□ 1.49
KLHDC4-210ENST00000562913 RGL3Q3MIN7 710 aa24.37■■□□□ 1.49
KLHDC4-210ENST00000562913 ACIN1Q9UKV3 1341 aaKnown RBP24.36■■□□□ 1.49
KLHDC4-210ENST00000562913 SPATA31E1Q6ZUB1 1445 aa24.36■■□□□ 1.49
KLHDC4-210ENST00000562913 COL16A1Q07092 1604 aaPredicted RBP24.36■■□□□ 1.49
KLHDC4-210ENST00000562913 RAB3GAP2Q9H2M9 1393 aa24.35■■□□□ 1.49
KLHDC4-210ENST00000562913 ADGRL3Q9HAR2 1447 aa24.35■■□□□ 1.49
KLHDC4-210ENST00000562913 NALCNQ8IZF0 1738 aa24.34■■□□□ 1.49
KLHDC4-210ENST00000562913 ADGRF5Q8IZF2 1346 aa24.34■■□□□ 1.49
KLHDC4-210ENST00000562913 BRINP3Q76B58 766 aa24.33■■□□□ 1.49
KLHDC4-210ENST00000562913 AHDC1Q5TGY3 1603 aaPredicted RBP24.32■■□□□ 1.48
KLHDC4-210ENST00000562913 JCADQ9P266 1359 aa24.32■■□□□ 1.48
KLHDC4-210ENST00000562913 MST1RQ04912 1400 aa24.32■■□□□ 1.48
KLHDC4-210ENST00000562913 PTCH1Q13635 1447 aa24.32■■□□□ 1.48
KLHDC4-210ENST00000562913 IFT172Q9UG01 1749 aa24.32■■□□□ 1.48
KLHDC4-210ENST00000562913 ROBO2Q9HCK4 1378 aa24.31■■□□□ 1.48
KLHDC4-210ENST00000562913 RGS17Q9UGC6 210 aaPredicted RBP24.31■■□□□ 1.48
KLHDC4-210ENST00000562913 ANKRD30BQ9BXX2 1392 aa24.29■■□□□ 1.48
KLHDC4-210ENST00000562913 ASXL1Q8IXJ9 1541 aa24.28■■□□□ 1.48
KLHDC4-210ENST00000562913 PRAG1Q86YV5 1406 aa24.27■■□□□ 1.48
KLHDC4-210ENST00000562913 SHPRHQ149N8 1683 aa24.22■■□□□ 1.47
KLHDC4-210ENST00000562913 NHSL1Q5SYE7 1610 aa24.22■■□□□ 1.47
KLHDC4-210ENST00000562913 PIK3C2GO75747 1445 aa24.22■■□□□ 1.47
KLHDC4-210ENST00000562913 STK26Q9P289 416 aa24.21■■□□□ 1.47
KLHDC4-210ENST00000562913 C1orf167Q5SNV9 1468 aa24.2■■□□□ 1.47
KLHDC4-210ENST00000562913 SPATA31A6Q5VVP1 1343 aa24.2■■□□□ 1.46
KLHDC4-210ENST00000562913 TMEM132EQ6IEE7 984 aa24.2■■□□□ 1.46
KLHDC4-210ENST00000562913 DDX17Q92841 729 aaKnown RBP24.2■■□□□ 1.46
KLHDC4-210ENST00000562913 LRP6O75581 1613 aa24.2■■□□□ 1.46
KLHDC4-210ENST00000562913 POTEAQ6S8J7 498 aa24.18■■□□□ 1.46
KLHDC4-210ENST00000562913 LRPPRCP42704 1394 aaKnown RBP24.17■■□□□ 1.46
KLHDC4-210ENST00000562913 TECPR2O15040 1411 aa24.16■■□□□ 1.46
KLHDC4-210ENST00000562913 WAPLQ7Z5K2 1190 aa24.15■■□□□ 1.46
KLHDC4-210ENST00000562913 ORAI2Q96SN7 254 aa24.15■■□□□ 1.46
KLHDC4-210ENST00000562913 MYOM2P54296 1465 aa24.14■■□□□ 1.46
KLHDC4-210ENST00000562913 NRXN1Q9ULB1 1477 aa24.14■■□□□ 1.46
KLHDC4-210ENST00000562913 HRCP23327 699 aa24.14■■□□□ 1.45
KLHDC4-210ENST00000562913 MEX3CQ5U5Q3 659 aaKnown RBP24.14■■□□□ 1.45
KLHDC4-210ENST00000562913 KNDC1Q76NI1 1749 aa24.14■■□□□ 1.45
KLHDC4-210ENST00000562913 ABCC11Q96J66 1382 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms