RNA–Protein interactions for RNA: ENST00000562055.1

CASKIN1-202, Transcript of CASK interacting protein 1, humanhuman

TSL 2

Gene CASKIN1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1-202ENST00000562055 RIMS2Q9UQ26 1411 aa23.32■■□□□ 1.32
CASKIN1-202ENST00000562055 IQGAP1P46940 1657 aa23.3■■□□□ 1.32
CASKIN1-202ENST00000562055 HDGFP51858 240 aaKnown RBP23.29■■□□□ 1.32
CASKIN1-202ENST00000562055 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.28■■□□□ 1.32
CASKIN1-202ENST00000562055 SPATA31E1Q6ZUB1 1445 aa23.27■■□□□ 1.32
CASKIN1-202ENST00000562055 NEXMIFQ5QGS0 1516 aa23.24■■□□□ 1.31
CASKIN1-202ENST00000562055 PLEKHG1Q9ULL1 1385 aa23.24■■□□□ 1.31
CASKIN1-202ENST00000562055 ZNF326Q5BKZ1 582 aaKnown RBP23.23■■□□□ 1.31
CASKIN1-202ENST00000562055 RPGRIP1LQ68CZ1 1315 aa23.23■■□□□ 1.31
CASKIN1-202ENST00000562055 PPP1R15AO75807 674 aaPredicted RBP23.2■■□□□ 1.3
CASKIN1-202ENST00000562055 PCGF6Q9BYE7 350 aa23.2■■□□□ 1.3
CASKIN1-202ENST00000562055 DHX57Q6P158 1386 aaKnown RBP23.19■■□□□ 1.3
CASKIN1-202ENST00000562055 LTBP4Q8N2S1 1624 aa23.18■■□□□ 1.3
CASKIN1-202ENST00000562055 PPLO60437 1756 aa23.17■■□□□ 1.3
CASKIN1-202ENST00000562055 NUTM2DQ5VT03 806 aaPredicted RBP23.16■■□□□ 1.3
CASKIN1-202ENST00000562055 SETBP1Q9Y6X0 1596 aa23.15■■□□□ 1.3
CASKIN1-202ENST00000562055 ZNF335Q9H4Z2 1342 aaPredicted RBP23.15■■□□□ 1.3
CASKIN1-202ENST00000562055 IFT172Q9UG01 1749 aa23.15■■□□□ 1.3
CASKIN1-202ENST00000562055 VGFO15240 615 aaPredicted RBP23.14■■□□□ 1.29
CASKIN1-202ENST00000562055 ADAMTS13Q76LX8 1427 aa23.14■■□□□ 1.29
CASKIN1-202ENST00000562055 RGL3Q3MIN7 710 aa23.13■■□□□ 1.29
CASKIN1-202ENST00000562055 SLC26A8Q96RN1 970 aa23.13■■□□□ 1.29
CASKIN1-202ENST00000562055 TBX22Q9Y458 520 aa23.13■■□□□ 1.29
CASKIN1-202ENST00000562055 DIP2AQ14689 1571 aa23.13■■□□□ 1.29
CASKIN1-202ENST00000562055 NRXN3Q9Y4C0 1643 aa23.12■■□□□ 1.29
CASKIN1-202ENST00000562055 BCANQ96GW7 911 aa23.1■■□□□ 1.29
CASKIN1-202ENST00000562055 CPS1P31327 1500 aa23.08■■□□□ 1.29
CASKIN1-202ENST00000562055 STRCP1A6NGW2 1772 aa23.07■■□□□ 1.28
CASKIN1-202ENST00000562055 PIK3R4Q99570 1358 aa23.07■■□□□ 1.28
CASKIN1-202ENST00000562055 MYOM2P54296 1465 aa23.06■■□□□ 1.28
CASKIN1-202ENST00000562055 NRXN1Q9ULB1 1477 aa23.05■■□□□ 1.28
CASKIN1-202ENST00000562055 CERKQ8TCT0 537 aa23.05■■□□□ 1.28
CASKIN1-202ENST00000562055 NWD1Q149M9 1564 aa23.05■■□□□ 1.28
CASKIN1-202ENST00000562055 ADGRF5Q8IZF2 1346 aa23.05■■□□□ 1.28
CASKIN1-202ENST00000562055 CHD2O14647 1828 aaKnown RBP23.04■■□□□ 1.28
CASKIN1-202ENST00000562055 KCNA6P17658 529 aa23.04■■□□□ 1.28
CASKIN1-202ENST00000562055 STAC3Q96MF2 364 aa23.04■■□□□ 1.28
CASKIN1-202ENST00000562055 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
CASKIN1-202ENST00000562055 IQSEC2Q5JU85 1478 aa23.03■■□□□ 1.28
CASKIN1-202ENST00000562055 PIK3C2GO75747 1445 aa23.02■■□□□ 1.28
CASKIN1-202ENST00000562055 SETD1AO15047 1707 aaKnown RBP23.02■■□□□ 1.28
CASKIN1-202ENST00000562055 ALKQ9UM73 1620 aa23.01■■□□□ 1.27
CASKIN1-202ENST00000562055 NKTRP30414 1462 aaKnown RBP23■■□□□ 1.27
CASKIN1-202ENST00000562055 SIN3AQ96ST3 1273 aa23■■□□□ 1.27
CASKIN1-202ENST00000562055 METP08581 1390 aa22.99■■□□□ 1.27
CASKIN1-202ENST00000562055 LRRC7Q96NW7 1537 aa22.98■■□□□ 1.27
CASKIN1-202ENST00000562055 DCAF11Q8TEB1 546 aa22.98■■□□□ 1.27
CASKIN1-202ENST00000562055 PTPRUQ92729 1446 aa22.98■■□□□ 1.27
CASKIN1-202ENST00000562055 XRN1Q8IZH2 1706 aaKnown RBP22.95■■□□□ 1.26
CASKIN1-202ENST00000562055 C14orf93Q9H972 538 aaKnown RBP22.93■■□□□ 1.26
CASKIN1-202ENST00000562055 AMOTL2Q9Y2J4 779 aa22.93■■□□□ 1.26
CASKIN1-202ENST00000562055 LAMC1P11047 1609 aa22.93■■□□□ 1.26
CASKIN1-202ENST00000562055 PRAG1Q86YV5 1406 aa22.92■■□□□ 1.26
CASKIN1-202ENST00000562055 CLSPNQ9HAW4 1339 aa22.92■■□□□ 1.26
CASKIN1-202ENST00000562055 NEUROD1Q13562 356 aa22.91■■□□□ 1.26
CASKIN1-202ENST00000562055 KDM2AQ9Y2K7 1162 aa22.91■■□□□ 1.26
CASKIN1-202ENST00000562055 XIRP1Q702N8 1843 aaKnown RBP22.91■■□□□ 1.26
CASKIN1-202ENST00000562055 L3MBTL2Q969R5 705 aa22.9■■□□□ 1.26
CASKIN1-202ENST00000562055 ASXL1Q8IXJ9 1541 aa22.89■■□□□ 1.26
CASKIN1-202ENST00000562055 PROSER2Q86WR7 435 aaPredicted RBP22.89■■□□□ 1.25
CASKIN1-202ENST00000562055 NCOA3Q9Y6Q9 1424 aa22.89■■□□□ 1.25
CASKIN1-202ENST00000562055 TMEM94Q12767 1356 aa22.89■■□□□ 1.25
CASKIN1-202ENST00000562055 CFAP70Q5T0N1 1121 aa22.87■■□□□ 1.25
CASKIN1-202ENST00000562055 PTCH1Q13635 1447 aa22.86■■□□□ 1.25
CASKIN1-202ENST00000562055 TECPR2O15040 1411 aa22.85■■□□□ 1.25
CASKIN1-202ENST00000562055 FBXO41Q8TF61 875 aa22.84■■□□□ 1.25
CASKIN1-202ENST00000562055 LRPPRCP42704 1394 aaKnown RBP22.84■■□□□ 1.25
CASKIN1-202ENST00000562055 ADGRB1O14514 1584 aa22.84■■□□□ 1.25
CASKIN1-202ENST00000562055 TMEM132EQ6IEE7 984 aa22.83■■□□□ 1.25
CASKIN1-202ENST00000562055 ABCC11Q96J66 1382 aa22.83■■□□□ 1.25
CASKIN1-202ENST00000562055 YTHDC2Q9H6S0 1430 aaKnown RBP22.82■■□□□ 1.24
CASKIN1-202ENST00000562055 KIAA1210Q9ULL0 1709 aa22.82■■□□□ 1.24
CASKIN1-202ENST00000562055 ROBO2Q9HCK4 1378 aa22.81■■□□□ 1.24
CASKIN1-202ENST00000562055 KNDC1Q76NI1 1749 aa22.81■■□□□ 1.24
CASKIN1-202ENST00000562055 TONSLQ96HA7 1378 aa22.8■■□□□ 1.24
CASKIN1-202ENST00000562055 RBM33Q96EV2 1170 aaKnown RBP22.8■■□□□ 1.24
CASKIN1-202ENST00000562055 SIRT1Q96EB6 747 aa22.78■■□□□ 1.24
CASKIN1-202ENST00000562055 CCER1Q8TC90 406 aaPredicted RBP22.77■■□□□ 1.24
CASKIN1-202ENST00000562055 MSH6P52701 1360 aa22.76■■□□□ 1.23
CASKIN1-202ENST00000562055 UBAP1LF5GYI3 381 aa22.76■■□□□ 1.23
CASKIN1-202ENST00000562055 STK26Q9P289 416 aa22.76■■□□□ 1.23
CASKIN1-202ENST00000562055 FAM135BQ49AJ0 1406 aa22.75■■□□□ 1.23
CASKIN1-202ENST00000562055 TOM1O60784 492 aa22.75■■□□□ 1.23
CASKIN1-202ENST00000562055 C19orf44Q9H6X5 657 aa22.75■■□□□ 1.23
CASKIN1-202ENST00000562055 DLC1Q96QB1 1528 aa22.74■■□□□ 1.23
CASKIN1-202ENST00000562055 TIMELESSQ9UNS1 1208 aa22.74■■□□□ 1.23
CASKIN1-202ENST00000562055 DCCP43146 1447 aa22.74■■□□□ 1.23
CASKIN1-202ENST00000562055 ADGRL3Q9HAR2 1447 aa22.74■■□□□ 1.23
CASKIN1-202ENST00000562055 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.73■■□□□ 1.23
CASKIN1-202ENST00000562055 TRPM1Q7Z4N2 1603 aa22.71■■□□□ 1.23
CASKIN1-202ENST00000562055 NALCNQ8IZF0 1738 aa22.71■■□□□ 1.23
CASKIN1-202ENST00000562055 NBPF1Q3BBV0 1214 aa22.71■■□□□ 1.23
CASKIN1-202ENST00000562055 C14orf37Q86TY3 774 aa22.71■■□□□ 1.23
CASKIN1-202ENST00000562055 NBPF8Q3BBV2 869 aa22.7■■□□□ 1.22
CASKIN1-202ENST00000562055 WAPLQ7Z5K2 1190 aa22.69■■□□□ 1.22
CASKIN1-202ENST00000562055 ILDR1Q86SU0 546 aaPredicted RBP22.69■■□□□ 1.22
CASKIN1-202ENST00000562055 PLEKHH1Q9ULM0 1364 aa22.68■■□□□ 1.22
CASKIN1-202ENST00000562055 CADPS2Q86UW7 1296 aa22.68■■□□□ 1.22
CASKIN1-202ENST00000562055 ATF3P18847 181 aa22.66■■□□□ 1.22
CASKIN1-202ENST00000562055 TRAK1Q9UPV9 953 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms