RNA–Protein interactions for RNA: ENST00000561996.1

CPT1A-207, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 4

Gene CPT1A, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-207ENST00000561996 SLC26A8Q96RN1 970 aa28.17■■■□□ 2.1
CPT1A-207ENST00000561996 RIMS2Q9UQ26 1411 aa28.17■■■□□ 2.1
CPT1A-207ENST00000561996 ALKQ9UM73 1620 aa28.15■■■□□ 2.1
CPT1A-207ENST00000561996 PPP1R15AO75807 674 aaPredicted RBP28.15■■■□□ 2.1
CPT1A-207ENST00000561996 HSPA1LP34931 641 aa28.14■■■□□ 2.1
CPT1A-207ENST00000561996 BCANQ96GW7 911 aa28.13■■■□□ 2.09
CPT1A-207ENST00000561996 NAIPQ13075 1403 aa28.12■■■□□ 2.09
CPT1A-207ENST00000561996 CHGAP10645 457 aaKnown RBP28.12■■■□□ 2.09
CPT1A-207ENST00000561996 NKTRP30414 1462 aaKnown RBP28.1■■■□□ 2.09
CPT1A-207ENST00000561996 TBX22Q9Y458 520 aa28.08■■■□□ 2.09
CPT1A-207ENST00000561996 TMEM94Q12767 1356 aa28.08■■■□□ 2.09
CPT1A-207ENST00000561996 NWD1Q149M9 1564 aa28.07■■■□□ 2.08
CPT1A-207ENST00000561996 HFM1A2PYH4 1435 aa28.07■■■□□ 2.08
CPT1A-207ENST00000561996 MYO5BQ9ULV0 1848 aa28.06■■■□□ 2.08
CPT1A-207ENST00000561996 PROSER2Q86WR7 435 aaPredicted RBP28.05■■■□□ 2.08
CPT1A-207ENST00000561996 XIRP1Q702N8 1843 aaKnown RBP28.02■■■□□ 2.08
CPT1A-207ENST00000561996 PIK3R4Q99570 1358 aa28■■■□□ 2.07
CPT1A-207ENST00000561996 DIP2AQ14689 1571 aa28■■■□□ 2.07
CPT1A-207ENST00000561996 SPHKAPQ2M3C7 1700 aa28■■■□□ 2.07
CPT1A-207ENST00000561996 ADAMTS13Q76LX8 1427 aa27.99■■■□□ 2.07
CPT1A-207ENST00000561996 FAM135BQ49AJ0 1406 aa27.98■■■□□ 2.07
CPT1A-207ENST00000561996 NCOA3Q9Y6Q9 1424 aa27.96■■■□□ 2.07
CPT1A-207ENST00000561996 ILDR2Q71H61 639 aa27.96■■■□□ 2.07
CPT1A-207ENST00000561996 TRPM2O94759 1503 aa27.95■■■□□ 2.06
CPT1A-207ENST00000561996 MSH6P52701 1360 aa27.95■■■□□ 2.06
CPT1A-207ENST00000561996 CHD2O14647 1828 aaKnown RBP27.95■■■□□ 2.06
CPT1A-207ENST00000561996 NUTM2DQ5VT03 806 aaPredicted RBP27.94■■■□□ 2.06
CPT1A-207ENST00000561996 TRIM52Q96A61 297 aa27.93■■■□□ 2.06
CPT1A-207ENST00000561996 SENP3Q9H4L4 574 aaPredicted RBP27.93■■■□□ 2.06
CPT1A-207ENST00000561996 ZNF326Q5BKZ1 582 aaKnown RBP27.91■■■□□ 2.06
CPT1A-207ENST00000561996 RBM33Q96EV2 1170 aaKnown RBP27.9■■■□□ 2.06
CPT1A-207ENST00000561996 MED1Q15648 1581 aaPredicted RBP27.9■■■□□ 2.06
CPT1A-207ENST00000561996 SLC4A1APQ9BWU0 796 aaKnown RBP27.88■■■□□ 2.05
CPT1A-207ENST00000561996 SETBP1Q9Y6X0 1596 aa27.87■■■□□ 2.05
CPT1A-207ENST00000561996 CLTCL1P53675 1640 aa27.87■■■□□ 2.05
CPT1A-207ENST00000561996 SOCS7O14512 581 aa27.85■■■□□ 2.05
CPT1A-207ENST00000561996 SLAIN2Q9P270 581 aa27.83■■■□□ 2.05
CPT1A-207ENST00000561996 AMOTL2Q9Y2J4 779 aa27.83■■■□□ 2.05
CPT1A-207ENST00000561996 ACIN1Q9UKV3 1341 aaKnown RBP27.83■■■□□ 2.05
CPT1A-207ENST00000561996 NEXMIFQ5QGS0 1516 aa27.82■■■□□ 2.04
CPT1A-207ENST00000561996 C19orf44Q9H6X5 657 aa27.81■■■□□ 2.04
CPT1A-207ENST00000561996 C14orf37Q86TY3 774 aa27.8■■■□□ 2.04
CPT1A-207ENST00000561996 NRXN3Q9Y4C0 1643 aa27.8■■■□□ 2.04
CPT1A-207ENST00000561996 PTPRUQ92729 1446 aa27.79■■■□□ 2.04
CPT1A-207ENST00000561996 RPGRIP1LQ68CZ1 1315 aa27.79■■■□□ 2.04
CPT1A-207ENST00000561996 CADPS2Q86UW7 1296 aa27.79■■■□□ 2.04
CPT1A-207ENST00000561996 ROBO1Q9Y6N7 1651 aa27.78■■■□□ 2.04
CPT1A-207ENST00000561996 KIF1BO60333 1816 aa27.78■■■□□ 2.04
CPT1A-207ENST00000561996 VGFO15240 615 aaPredicted RBP27.76■■■□□ 2.03
CPT1A-207ENST00000561996 PHF23Q9BUL5 403 aaPredicted RBP27.76■■■□□ 2.03
CPT1A-207ENST00000561996 ATF3P18847 181 aa27.74■■■□□ 2.03
CPT1A-207ENST00000561996 METP08581 1390 aa27.73■■■□□ 2.03
CPT1A-207ENST00000561996 DCCP43146 1447 aa27.73■■■□□ 2.03
CPT1A-207ENST00000561996 XRN1Q8IZH2 1706 aaKnown RBP27.72■■■□□ 2.03
CPT1A-207ENST00000561996 MPHOSPH9Q99550 1183 aa27.7■■■□□ 2.02
CPT1A-207ENST00000561996 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.68■■■□□ 2.02
CPT1A-207ENST00000561996 CCDC144AA2RUR9 1427 aa27.67■■■□□ 2.02
CPT1A-207ENST00000561996 FOXD1Q16676 465 aa27.65■■■□□ 2.02
CPT1A-207ENST00000561996 SETD5Q9C0A6 1442 aa27.65■■■□□ 2.02
CPT1A-207ENST00000561996 JCADQ9P266 1359 aa27.63■■■□□ 2.01
CPT1A-207ENST00000561996 PTCH1Q13635 1447 aa27.61■■■□□ 2.01
CPT1A-207ENST00000561996 PRAG1Q86YV5 1406 aa27.61■■■□□ 2.01
CPT1A-207ENST00000561996 PHLPP1O60346 1717 aa27.61■■■□□ 2.01
CPT1A-207ENST00000561996 ADGRL3Q9HAR2 1447 aa27.6■■■□□ 2.01
CPT1A-207ENST00000561996 AHDC1Q5TGY3 1603 aaPredicted RBP27.59■■■□□ 2.01
CPT1A-207ENST00000561996 ANKRD30BQ9BXX2 1392 aa27.59■■■□□ 2.01
CPT1A-207ENST00000561996 SPATA31E1Q6ZUB1 1445 aa27.58■■■□□ 2.01
CPT1A-207ENST00000561996 PPLO60437 1756 aa27.58■■■□□ 2
CPT1A-207ENST00000561996 BRINP3Q76B58 766 aa27.57■■■□□ 2
CPT1A-207ENST00000561996 COL16A1Q07092 1604 aaPredicted RBP27.56■■■□□ 2
CPT1A-207ENST00000561996 MST1RQ04912 1400 aa27.56■■■□□ 2
CPT1A-207ENST00000561996 SETD1AO15047 1707 aaKnown RBP27.55■■■□□ 2
CPT1A-207ENST00000561996 RGS17Q9UGC6 210 aaPredicted RBP27.53■■■□□ 2
CPT1A-207ENST00000561996 SPATA31A6Q5VVP1 1343 aa27.52■■■□□ 2
CPT1A-207ENST00000561996 RAB3GAP2Q9H2M9 1393 aa27.51■■□□□ 1.99
CPT1A-207ENST00000561996 ROBO2Q9HCK4 1378 aa27.51■■□□□ 1.99
CPT1A-207ENST00000561996 RGL3Q3MIN7 710 aa27.51■■□□□ 1.99
CPT1A-207ENST00000561996 ADGRF5Q8IZF2 1346 aa27.5■■□□□ 1.99
CPT1A-207ENST00000561996 ASXL1Q8IXJ9 1541 aa27.5■■□□□ 1.99
CPT1A-207ENST00000561996 NALCNQ8IZF0 1738 aa27.47■■□□□ 1.99
CPT1A-207ENST00000561996 HRCP23327 699 aa27.45■■□□□ 1.98
CPT1A-207ENST00000561996 PIK3C2GO75747 1445 aa27.43■■□□□ 1.98
CPT1A-207ENST00000561996 IFT172Q9UG01 1749 aa27.43■■□□□ 1.98
CPT1A-207ENST00000561996 C1orf167Q5SNV9 1468 aa27.43■■□□□ 1.98
CPT1A-207ENST00000561996 TECPR2O15040 1411 aa27.42■■□□□ 1.98
CPT1A-207ENST00000561996 SHPRHQ149N8 1683 aa27.42■■□□□ 1.98
CPT1A-207ENST00000561996 LRPPRCP42704 1394 aaKnown RBP27.41■■□□□ 1.98
CPT1A-207ENST00000561996 LRRC59Q96AG4 307 aaKnown RBP27.41■■□□□ 1.98
CPT1A-207ENST00000561996 ABCC11Q96J66 1382 aa27.4■■□□□ 1.98
CPT1A-207ENST00000561996 NHSL1Q5SYE7 1610 aa27.4■■□□□ 1.98
CPT1A-207ENST00000561996 POTEAQ6S8J7 498 aa27.38■■□□□ 1.97
CPT1A-207ENST00000561996 LRP6O75581 1613 aa27.37■■□□□ 1.97
CPT1A-207ENST00000561996 MYOM2P54296 1465 aa27.37■■□□□ 1.97
CPT1A-207ENST00000561996 MEX3CQ5U5Q3 659 aaKnown RBP27.36■■□□□ 1.97
CPT1A-207ENST00000561996 NRXN1Q9ULB1 1477 aa27.36■■□□□ 1.97
CPT1A-207ENST00000561996 C14orf93Q9H972 538 aaKnown RBP27.35■■□□□ 1.97
CPT1A-207ENST00000561996 CDC42BPGQ6DT37 1551 aa27.35■■□□□ 1.97
CPT1A-207ENST00000561996 SIRT1Q96EB6 747 aa27.33■■□□□ 1.97
CPT1A-207ENST00000561996 STK26Q9P289 416 aa27.33■■□□□ 1.97
CPT1A-207ENST00000561996 LAMC1P11047 1609 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms