RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 PIP4K2BP78356 416 aa20.53■□□□□ 0.88
USB1-205ENST00000561743 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
USB1-205ENST00000561743 CHD2O14647 1828 aaKnown RBP20.51■□□□□ 0.87
USB1-205ENST00000561743 SLC26A8Q96RN1 970 aa20.51■□□□□ 0.87
USB1-205ENST00000561743 PLEKHG1Q9ULL1 1385 aa20.5■□□□□ 0.87
USB1-205ENST00000561743 DISP3Q9P2K9 1392 aa20.49■□□□□ 0.87
USB1-205ENST00000561743 HFM1A2PYH4 1435 aa20.49■□□□□ 0.87
USB1-205ENST00000561743 CHGAP10645 457 aaKnown RBP20.48■□□□□ 0.87
USB1-205ENST00000561743 NKTRP30414 1462 aaKnown RBP20.48■□□□□ 0.87
USB1-205ENST00000561743 KCNA6P17658 529 aa20.47■□□□□ 0.87
USB1-205ENST00000561743 HSPA1LP34931 641 aa20.47■□□□□ 0.87
USB1-205ENST00000561743 CLTCL1P53675 1640 aa20.46■□□□□ 0.87
USB1-205ENST00000561743 PPP1R15AO75807 674 aaPredicted RBP20.46■□□□□ 0.87
USB1-205ENST00000561743 TRPM2O94759 1503 aa20.45■□□□□ 0.86
USB1-205ENST00000561743 HDGFP51858 240 aaKnown RBP20.45■□□□□ 0.86
USB1-205ENST00000561743 BCANQ96GW7 911 aa20.45■□□□□ 0.86
USB1-205ENST00000561743 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
USB1-205ENST00000561743 DIP2AQ14689 1571 aa20.44■□□□□ 0.86
USB1-205ENST00000561743 TMEM94Q12767 1356 aa20.44■□□□□ 0.86
USB1-205ENST00000561743 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.43■□□□□ 0.86
USB1-205ENST00000561743 KIF1BO60333 1816 aa20.43■□□□□ 0.86
USB1-205ENST00000561743 ADAMTS13Q76LX8 1427 aa20.43■□□□□ 0.86
USB1-205ENST00000561743 NUTM2DQ5VT03 806 aaPredicted RBP20.42■□□□□ 0.86
USB1-205ENST00000561743 NRXN3Q9Y4C0 1643 aa20.41■□□□□ 0.86
USB1-205ENST00000561743 PROSER2Q86WR7 435 aaPredicted RBP20.4■□□□□ 0.86
USB1-205ENST00000561743 MED1Q15648 1581 aaPredicted RBP20.38■□□□□ 0.85
USB1-205ENST00000561743 RBM33Q96EV2 1170 aaKnown RBP20.38■□□□□ 0.85
USB1-205ENST00000561743 TBX22Q9Y458 520 aa20.38■□□□□ 0.85
USB1-205ENST00000561743 SETBP1Q9Y6X0 1596 aa20.38■□□□□ 0.85
USB1-205ENST00000561743 NEXMIFQ5QGS0 1516 aa20.37■□□□□ 0.85
USB1-205ENST00000561743 ROBO1Q9Y6N7 1651 aa20.36■□□□□ 0.85
USB1-205ENST00000561743 ILDR2Q71H61 639 aa20.36■□□□□ 0.85
USB1-205ENST00000561743 TRIM52Q96A61 297 aa20.35■□□□□ 0.85
USB1-205ENST00000561743 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
USB1-205ENST00000561743 XRN1Q8IZH2 1706 aaKnown RBP20.33■□□□□ 0.84
USB1-205ENST00000561743 FAM135BQ49AJ0 1406 aa20.32■□□□□ 0.84
USB1-205ENST00000561743 MSH6P52701 1360 aa20.32■□□□□ 0.84
USB1-205ENST00000561743 ZNF326Q5BKZ1 582 aaKnown RBP20.31■□□□□ 0.84
USB1-205ENST00000561743 PTPRUQ92729 1446 aa20.3■□□□□ 0.84
USB1-205ENST00000561743 SLC4A1APQ9BWU0 796 aaKnown RBP20.3■□□□□ 0.84
USB1-205ENST00000561743 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.3■□□□□ 0.84
USB1-205ENST00000561743 NCOA3Q9Y6Q9 1424 aa20.29■□□□□ 0.84
USB1-205ENST00000561743 PPLO60437 1756 aa20.29■□□□□ 0.84
USB1-205ENST00000561743 SETD1AO15047 1707 aaKnown RBP20.27■□□□□ 0.84
USB1-205ENST00000561743 METP08581 1390 aa20.24■□□□□ 0.83
USB1-205ENST00000561743 AMOTL2Q9Y2J4 779 aa20.24■□□□□ 0.83
USB1-205ENST00000561743 PHLPP1O60346 1717 aa20.24■□□□□ 0.83
USB1-205ENST00000561743 FOXD1Q16676 465 aa20.23■□□□□ 0.83
USB1-205ENST00000561743 SLAIN2Q9P270 581 aa20.22■□□□□ 0.83
USB1-205ENST00000561743 IFT172Q9UG01 1749 aa20.21■□□□□ 0.83
USB1-205ENST00000561743 C14orf37Q86TY3 774 aa20.2■□□□□ 0.82
USB1-205ENST00000561743 C19orf44Q9H6X5 657 aa20.19■□□□□ 0.82
USB1-205ENST00000561743 NALCNQ8IZF0 1738 aa20.19■□□□□ 0.82
USB1-205ENST00000561743 MPHOSPH9Q99550 1183 aa20.18■□□□□ 0.82
USB1-205ENST00000561743 CCDC144AA2RUR9 1427 aa20.18■□□□□ 0.82
USB1-205ENST00000561743 SETD5Q9C0A6 1442 aa20.18■□□□□ 0.82
USB1-205ENST00000561743 COL16A1Q07092 1604 aaPredicted RBP20.17■□□□□ 0.82
USB1-205ENST00000561743 SOCS7O14512 581 aa20.17■□□□□ 0.82
USB1-205ENST00000561743 VGFO15240 615 aaPredicted RBP20.17■□□□□ 0.82
USB1-205ENST00000561743 RPGRIP1LQ68CZ1 1315 aa20.17■□□□□ 0.82
USB1-205ENST00000561743 DCCP43146 1447 aa20.17■□□□□ 0.82
USB1-205ENST00000561743 CADPS2Q86UW7 1296 aa20.16■□□□□ 0.82
USB1-205ENST00000561743 SPATA31E1Q6ZUB1 1445 aa20.15■□□□□ 0.82
USB1-205ENST00000561743 AHDC1Q5TGY3 1603 aaPredicted RBP20.14■□□□□ 0.81
USB1-205ENST00000561743 ATF3P18847 181 aa20.14■□□□□ 0.81
USB1-205ENST00000561743 PHF23Q9BUL5 403 aaPredicted RBP20.13■□□□□ 0.81
USB1-205ENST00000561743 ADGRL3Q9HAR2 1447 aa20.12■□□□□ 0.81
USB1-205ENST00000561743 ACIN1Q9UKV3 1341 aaKnown RBP20.12■□□□□ 0.81
USB1-205ENST00000561743 PTCH1Q13635 1447 aa20.11■□□□□ 0.81
USB1-205ENST00000561743 PRAG1Q86YV5 1406 aa20.11■□□□□ 0.81
USB1-205ENST00000561743 RAB3GAP2Q9H2M9 1393 aa20.11■□□□□ 0.81
USB1-205ENST00000561743 MST1RQ04912 1400 aa20.1■□□□□ 0.81
USB1-205ENST00000561743 NHSL1Q5SYE7 1610 aa20.09■□□□□ 0.81
USB1-205ENST00000561743 ASXL1Q8IXJ9 1541 aa20.08■□□□□ 0.81
USB1-205ENST00000561743 SHPRHQ149N8 1683 aa20.08■□□□□ 0.81
USB1-205ENST00000561743 ROBO2Q9HCK4 1378 aa20.08■□□□□ 0.8
USB1-205ENST00000561743 ADGRF5Q8IZF2 1346 aa20.07■□□□□ 0.8
USB1-205ENST00000561743 RGL3Q3MIN7 710 aa20.07■□□□□ 0.8
USB1-205ENST00000561743 JCADQ9P266 1359 aa20.07■□□□□ 0.8
USB1-205ENST00000561743 BRINP3Q76B58 766 aa20.06■□□□□ 0.8
USB1-205ENST00000561743 ANKRD30BQ9BXX2 1392 aa20.06■□□□□ 0.8
USB1-205ENST00000561743 RGS17Q9UGC6 210 aaPredicted RBP20.05■□□□□ 0.8
USB1-205ENST00000561743 KNDC1Q76NI1 1749 aa20.04■□□□□ 0.8
USB1-205ENST00000561743 PIK3C2GO75747 1445 aa20.03■□□□□ 0.8
USB1-205ENST00000561743 LRP6O75581 1613 aa20■□□□□ 0.79
USB1-205ENST00000561743 LAMC1P11047 1609 aa20■□□□□ 0.79
USB1-205ENST00000561743 C1orf167Q5SNV9 1468 aa19.99■□□□□ 0.79
USB1-205ENST00000561743 TECPR2O15040 1411 aa19.99■□□□□ 0.79
USB1-205ENST00000561743 CDC42BPGQ6DT37 1551 aa19.99■□□□□ 0.79
USB1-205ENST00000561743 MYOM2P54296 1465 aa19.99■□□□□ 0.79
USB1-205ENST00000561743 NRXN1Q9ULB1 1477 aa19.99■□□□□ 0.79
USB1-205ENST00000561743 SPATA31A6Q5VVP1 1343 aa19.97■□□□□ 0.79
USB1-205ENST00000561743 LRPPRCP42704 1394 aaKnown RBP19.95■□□□□ 0.79
USB1-205ENST00000561743 TMEM132EQ6IEE7 984 aa19.94■□□□□ 0.78
USB1-205ENST00000561743 DDX17Q92841 729 aaKnown RBP19.93■□□□□ 0.78
USB1-205ENST00000561743 ABCC11Q96J66 1382 aa19.93■□□□□ 0.78
USB1-205ENST00000561743 YTHDC2Q9H6S0 1430 aaKnown RBP19.93■□□□□ 0.78
USB1-205ENST00000561743 HRCP23327 699 aa19.92■□□□□ 0.78
USB1-205ENST00000561743 POTEAQ6S8J7 498 aa19.92■□□□□ 0.78
USB1-205ENST00000561743 STK26Q9P289 416 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms