RNA–Protein interactions for RNA: ENST00000561631.1

RPAP1-203, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-203ENST00000561631 ZFYVE9O95405 1425 aa19.65■□□□□ 0.74
RPAP1-203ENST00000561631 LTKP29376 864 aa19.64■□□□□ 0.73
RPAP1-203ENST00000561631 HDGFP51858 240 aaKnown RBP19.64■□□□□ 0.73
RPAP1-203ENST00000561631 FBXO41Q8TF61 875 aa19.63■□□□□ 0.73
RPAP1-203ENST00000561631 BCANQ96GW7 911 aa19.62■□□□□ 0.73
RPAP1-203ENST00000561631 DIP2AQ14689 1571 aa19.61■□□□□ 0.73
RPAP1-203ENST00000561631 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.61■□□□□ 0.73
RPAP1-203ENST00000561631 STRCP1A6NGW2 1772 aa19.6■□□□□ 0.73
RPAP1-203ENST00000561631 ZNF326Q5BKZ1 582 aaKnown RBP19.6■□□□□ 0.73
RPAP1-203ENST00000561631 CCDC144AA2RUR9 1427 aa19.59■□□□□ 0.73
RPAP1-203ENST00000561631 PLEKHG1Q9ULL1 1385 aa19.59■□□□□ 0.73
RPAP1-203ENST00000561631 ILDR1Q86SU0 546 aaPredicted RBP19.59■□□□□ 0.73
RPAP1-203ENST00000561631 MPHOSPH9Q99550 1183 aa19.57■□□□□ 0.72
RPAP1-203ENST00000561631 NEXMIFQ5QGS0 1516 aa19.56■□□□□ 0.72
RPAP1-203ENST00000561631 NWD1Q149M9 1564 aa19.56■□□□□ 0.72
RPAP1-203ENST00000561631 FOXD1Q16676 465 aa19.54■□□□□ 0.72
RPAP1-203ENST00000561631 PPLO60437 1756 aa19.54■□□□□ 0.72
RPAP1-203ENST00000561631 SENP3Q9H4L4 574 aaPredicted RBP19.53■□□□□ 0.72
RPAP1-203ENST00000561631 NKTRP30414 1462 aaKnown RBP19.53■□□□□ 0.72
RPAP1-203ENST00000561631 SETBP1Q9Y6X0 1596 aa19.53■□□□□ 0.72
RPAP1-203ENST00000561631 NUTM2DQ5VT03 806 aaPredicted RBP19.52■□□□□ 0.72
RPAP1-203ENST00000561631 SLC26A8Q96RN1 970 aa19.52■□□□□ 0.72
RPAP1-203ENST00000561631 CHD2O14647 1828 aaKnown RBP19.51■□□□□ 0.71
RPAP1-203ENST00000561631 NRXN3Q9Y4C0 1643 aa19.51■□□□□ 0.71
RPAP1-203ENST00000561631 LRRC7Q96NW7 1537 aa19.51■□□□□ 0.71
RPAP1-203ENST00000561631 IFT172Q9UG01 1749 aa19.49■□□□□ 0.71
RPAP1-203ENST00000561631 XIRP1Q702N8 1843 aaKnown RBP19.47■□□□□ 0.71
RPAP1-203ENST00000561631 ADAMTS13Q76LX8 1427 aa19.47■□□□□ 0.71
RPAP1-203ENST00000561631 UBAP1LF5GYI3 381 aa19.46■□□□□ 0.71
RPAP1-203ENST00000561631 HRCP23327 699 aa19.46■□□□□ 0.71
RPAP1-203ENST00000561631 PIK3R4Q99570 1358 aa19.44■□□□□ 0.7
RPAP1-203ENST00000561631 KCNA6P17658 529 aa19.44■□□□□ 0.7
RPAP1-203ENST00000561631 RPGRIP1LQ68CZ1 1315 aa19.44■□□□□ 0.7
RPAP1-203ENST00000561631 SPATA31E1Q6ZUB1 1445 aa19.42■□□□□ 0.7
RPAP1-203ENST00000561631 XRN1Q8IZH2 1706 aaKnown RBP19.42■□□□□ 0.7
RPAP1-203ENST00000561631 VGFO15240 615 aaPredicted RBP19.42■□□□□ 0.7
RPAP1-203ENST00000561631 TBX22Q9Y458 520 aa19.42■□□□□ 0.7
RPAP1-203ENST00000561631 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
RPAP1-203ENST00000561631 TOM1O60784 492 aa19.41■□□□□ 0.7
RPAP1-203ENST00000561631 SETD1AO15047 1707 aaKnown RBP19.41■□□□□ 0.7
RPAP1-203ENST00000561631 TMEM94Q12767 1356 aa19.4■□□□□ 0.7
RPAP1-203ENST00000561631 ANKRD30BQ9BXX2 1392 aa19.39■□□□□ 0.69
RPAP1-203ENST00000561631 LAMC1P11047 1609 aa19.38■□□□□ 0.69
RPAP1-203ENST00000561631 RGL3Q3MIN7 710 aa19.38■□□□□ 0.69
RPAP1-203ENST00000561631 PROSER2Q86WR7 435 aaPredicted RBP19.38■□□□□ 0.69
RPAP1-203ENST00000561631 ALKQ9UM73 1620 aa19.37■□□□□ 0.69
RPAP1-203ENST00000561631 MSH6P52701 1360 aa19.36■□□□□ 0.69
RPAP1-203ENST00000561631 MYOM2P54296 1465 aa19.35■□□□□ 0.69
RPAP1-203ENST00000561631 PIP4K2BP78356 416 aa19.34■□□□□ 0.69
RPAP1-203ENST00000561631 C14orf37Q86TY3 774 aa19.34■□□□□ 0.69
RPAP1-203ENST00000561631 TRIM26Q12899 539 aaPredicted RBP19.33■□□□□ 0.68
RPAP1-203ENST00000561631 PTPRUQ92729 1446 aa19.33■□□□□ 0.68
RPAP1-203ENST00000561631 METP08581 1390 aa19.32■□□□□ 0.68
RPAP1-203ENST00000561631 PIK3C2GO75747 1445 aa19.32■□□□□ 0.68
RPAP1-203ENST00000561631 AMOTL2Q9Y2J4 779 aa19.31■□□□□ 0.68
RPAP1-203ENST00000561631 NCOA3Q9Y6Q9 1424 aa19.31■□□□□ 0.68
RPAP1-203ENST00000561631 KNDC1Q76NI1 1749 aa19.29■□□□□ 0.68
RPAP1-203ENST00000561631 NALCNQ8IZF0 1738 aa19.29■□□□□ 0.68
RPAP1-203ENST00000561631 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.29■□□□□ 0.68
RPAP1-203ENST00000561631 PTCH1Q13635 1447 aa19.29■□□□□ 0.68
RPAP1-203ENST00000561631 RBM33Q96EV2 1170 aaKnown RBP19.29■□□□□ 0.68
RPAP1-203ENST00000561631 ADGRF5Q8IZF2 1346 aa19.27■□□□□ 0.68
RPAP1-203ENST00000561631 ROBO1Q9Y6N7 1651 aa19.27■□□□□ 0.68
RPAP1-203ENST00000561631 NRXN1Q9ULB1 1477 aa19.26■□□□□ 0.67
RPAP1-203ENST00000561631 ASXL1Q8IXJ9 1541 aa19.25■□□□□ 0.67
RPAP1-203ENST00000561631 DCCP43146 1447 aa19.25■□□□□ 0.67
RPAP1-203ENST00000561631 PRAG1Q86YV5 1406 aa19.25■□□□□ 0.67
RPAP1-203ENST00000561631 ADGRL3Q9HAR2 1447 aa19.24■□□□□ 0.67
RPAP1-203ENST00000561631 ATF3P18847 181 aa19.21■□□□□ 0.67
RPAP1-203ENST00000561631 CADPS2Q86UW7 1296 aa19.2■□□□□ 0.66
RPAP1-203ENST00000561631 DCAF11Q8TEB1 546 aa19.19■□□□□ 0.66
RPAP1-203ENST00000561631 C19orf44Q9H6X5 657 aa19.19■□□□□ 0.66
RPAP1-203ENST00000561631 TECPR2O15040 1411 aa19.18■□□□□ 0.66
RPAP1-203ENST00000561631 FAM135BQ49AJ0 1406 aa19.18■□□□□ 0.66
RPAP1-203ENST00000561631 PHLPP1O60346 1717 aa19.18■□□□□ 0.66
RPAP1-203ENST00000561631 LRPPRCP42704 1394 aaKnown RBP19.18■□□□□ 0.66
RPAP1-203ENST00000561631 DHX57Q6P158 1386 aaKnown RBP19.18■□□□□ 0.66
RPAP1-203ENST00000561631 ROBO2Q9HCK4 1378 aa19.18■□□□□ 0.66
RPAP1-203ENST00000561631 YTHDC2Q9H6S0 1430 aaKnown RBP19.17■□□□□ 0.66
RPAP1-203ENST00000561631 HSPA1LP34931 641 aa19.17■□□□□ 0.66
RPAP1-203ENST00000561631 STAC3Q96MF2 364 aa19.17■□□□□ 0.66
RPAP1-203ENST00000561631 KDM2AQ9Y2K7 1162 aa19.17■□□□□ 0.66
RPAP1-203ENST00000561631 CDC42BPGQ6DT37 1551 aa19.17■□□□□ 0.66
RPAP1-203ENST00000561631 KIAA1210Q9ULL0 1709 aa19.15■□□□□ 0.66
RPAP1-203ENST00000561631 STK26Q9P289 416 aa19.15■□□□□ 0.66
RPAP1-203ENST00000561631 SLAIN2Q9P270 581 aa19.14■□□□□ 0.65
RPAP1-203ENST00000561631 TMEM132EQ6IEE7 984 aa19.13■□□□□ 0.65
RPAP1-203ENST00000561631 C14orf93Q9H972 538 aaKnown RBP19.13■□□□□ 0.65
RPAP1-203ENST00000561631 ADGRB1O14514 1584 aa19.12■□□□□ 0.65
RPAP1-203ENST00000561631 DLC1Q96QB1 1528 aa19.12■□□□□ 0.65
RPAP1-203ENST00000561631 MST1RQ04912 1400 aa19.12■□□□□ 0.65
RPAP1-203ENST00000561631 ABCC11Q96J66 1382 aa19.12■□□□□ 0.65
RPAP1-203ENST00000561631 CFAP70Q5T0N1 1121 aa19.12■□□□□ 0.65
RPAP1-203ENST00000561631 AHDC1Q5TGY3 1603 aaPredicted RBP19.11■□□□□ 0.65
RPAP1-203ENST00000561631 ARHGEF28Q8N1W1 1705 aaKnown RBP19.09■□□□□ 0.65
RPAP1-203ENST00000561631 NHSL1Q5SYE7 1610 aa19.09■□□□□ 0.65
RPAP1-203ENST00000561631 MED1Q15648 1581 aaPredicted RBP19.08■□□□□ 0.65
RPAP1-203ENST00000561631 FMN2Q9NZ56 1722 aa19.08■□□□□ 0.64
RPAP1-203ENST00000561631 COL16A1Q07092 1604 aaPredicted RBP19.07■□□□□ 0.64
RPAP1-203ENST00000561631 NEUROD1Q13562 356 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms