RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 SLC4A1APQ9BWU0 796 aaKnown RBP35.7■■■■□ 3.31
CDR2-202ENST00000561630 PLEKHG1Q9ULL1 1385 aa35.7■■■■□ 3.31
CDR2-202ENST00000561630 MYO5BQ9ULV0 1848 aa35.69■■■■□ 3.3
CDR2-202ENST00000561630 STRCP1A6NGW2 1772 aa35.69■■■■□ 3.3
CDR2-202ENST00000561630 LRRC7Q96NW7 1537 aa35.69■■■■□ 3.3
CDR2-202ENST00000561630 BCANQ96GW7 911 aa35.67■■■■□ 3.3
CDR2-202ENST00000561630 TRPM2O94759 1503 aa35.66■■■■□ 3.3
CDR2-202ENST00000561630 KCNA6P17658 529 aa35.62■■■■□ 3.29
CDR2-202ENST00000561630 TOM1O60784 492 aa35.61■■■■□ 3.29
CDR2-202ENST00000561630 NUTM2DQ5VT03 806 aaPredicted RBP35.61■■■■□ 3.29
CDR2-202ENST00000561630 SENP3Q9H4L4 574 aaPredicted RBP35.6■■■■□ 3.29
CDR2-202ENST00000561630 SETD5Q9C0A6 1442 aa35.57■■■■□ 3.29
CDR2-202ENST00000561630 CLTCL1P53675 1640 aa35.57■■■■□ 3.29
CDR2-202ENST00000561630 TBX22Q9Y458 520 aa35.57■■■■□ 3.28
CDR2-202ENST00000561630 ACIN1Q9UKV3 1341 aaKnown RBP35.57■■■■□ 3.28
CDR2-202ENST00000561630 ZNF326Q5BKZ1 582 aaKnown RBP35.55■■■■□ 3.28
CDR2-202ENST00000561630 ADAMTS13Q76LX8 1427 aa35.52■■■■□ 3.28
CDR2-202ENST00000561630 MPHOSPH9Q99550 1183 aa35.52■■■■□ 3.28
CDR2-202ENST00000561630 PIP4K2BP78356 416 aa35.5■■■■□ 3.27
CDR2-202ENST00000561630 FOXD1Q16676 465 aa35.5■■■■□ 3.27
CDR2-202ENST00000561630 NWD1Q149M9 1564 aa35.5■■■■□ 3.27
CDR2-202ENST00000561630 TMEM94Q12767 1356 aa35.48■■■■□ 3.27
CDR2-202ENST00000561630 NKTRP30414 1462 aaKnown RBP35.48■■■■□ 3.27
CDR2-202ENST00000561630 ALKQ9UM73 1620 aa35.47■■■■□ 3.27
CDR2-202ENST00000561630 PROSER2Q86WR7 435 aaPredicted RBP35.47■■■■□ 3.27
CDR2-202ENST00000561630 SCAF1Q9H7N4 1312 aaKnown RBP35.47■■■■□ 3.27
CDR2-202ENST00000561630 DIP2AQ14689 1571 aa35.46■■■■□ 3.27
CDR2-202ENST00000561630 RAB3GAP2Q9H2M9 1393 aa35.44■■■■□ 3.26
CDR2-202ENST00000561630 PIK3R4Q99570 1358 aa35.43■■■■□ 3.26
CDR2-202ENST00000561630 NEXMIFQ5QGS0 1516 aa35.42■■■■□ 3.26
CDR2-202ENST00000561630 KIF1BO60333 1816 aa35.39■■■■□ 3.26
CDR2-202ENST00000561630 XIRP1Q702N8 1843 aaKnown RBP35.39■■■■□ 3.26
CDR2-202ENST00000561630 SETBP1Q9Y6X0 1596 aa35.39■■■■□ 3.26
CDR2-202ENST00000561630 RBM33Q96EV2 1170 aaKnown RBP35.38■■■■□ 3.25
CDR2-202ENST00000561630 CHD2O14647 1828 aaKnown RBP35.37■■■■□ 3.25
CDR2-202ENST00000561630 CCDC144AA2RUR9 1427 aa35.37■■■■□ 3.25
CDR2-202ENST00000561630 RPGRIP1LQ68CZ1 1315 aa35.36■■■■□ 3.25
CDR2-202ENST00000561630 HSPA1LP34931 641 aa35.34■■■■□ 3.25
CDR2-202ENST00000561630 NRXN3Q9Y4C0 1643 aa35.34■■■■□ 3.25
CDR2-202ENST00000561630 VGFO15240 615 aaPredicted RBP35.33■■■■□ 3.25
CDR2-202ENST00000561630 AMOTL2Q9Y2J4 779 aa35.3■■■■□ 3.24
CDR2-202ENST00000561630 PTPRUQ92729 1446 aa35.3■■■■□ 3.24
CDR2-202ENST00000561630 HRCP23327 699 aa35.29■■■■□ 3.24
CDR2-202ENST00000561630 NCOA3Q9Y6Q9 1424 aa35.28■■■■□ 3.24
CDR2-202ENST00000561630 METP08581 1390 aa35.27■■■■□ 3.24
CDR2-202ENST00000561630 MSH6P52701 1360 aa35.27■■■■□ 3.24
CDR2-202ENST00000561630 SPATA31E1Q6ZUB1 1445 aa35.26■■■■□ 3.24
CDR2-202ENST00000561630 RGL3Q3MIN7 710 aa35.21■■■■□ 3.23
CDR2-202ENST00000561630 FAM135BQ49AJ0 1406 aa35.21■■■■□ 3.23
CDR2-202ENST00000561630 C14orf37Q86TY3 774 aa35.17■■■■□ 3.22
CDR2-202ENST00000561630 XRN1Q8IZH2 1706 aaKnown RBP35.17■■■■□ 3.22
CDR2-202ENST00000561630 PPLO60437 1756 aa35.16■■■■□ 3.22
CDR2-202ENST00000561630 C19orf44Q9H6X5 657 aa35.16■■■■□ 3.22
CDR2-202ENST00000561630 ANKRD30BQ9BXX2 1392 aa35.14■■■■□ 3.22
CDR2-202ENST00000561630 SLAIN2Q9P270 581 aa35.14■■■■□ 3.22
CDR2-202ENST00000561630 ADGRF5Q8IZF2 1346 aa35.12■■■■□ 3.21
CDR2-202ENST00000561630 DISP3Q9P2K9 1392 aa35.11■■■■□ 3.21
CDR2-202ENST00000561630 CADPS2Q86UW7 1296 aa35.09■■■■□ 3.21
CDR2-202ENST00000561630 ATF3P18847 181 aa35.07■■■■□ 3.2
CDR2-202ENST00000561630 SETD1AO15047 1707 aaKnown RBP35.06■■■■□ 3.2
CDR2-202ENST00000561630 ROBO1Q9Y6N7 1651 aa35.03■■■■□ 3.2
CDR2-202ENST00000561630 DCCP43146 1447 aa35.02■■■■□ 3.2
CDR2-202ENST00000561630 PTCH1Q13635 1447 aa35.02■■■■□ 3.2
CDR2-202ENST00000561630 PRAG1Q86YV5 1406 aa35.02■■■■□ 3.2
CDR2-202ENST00000561630 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.02■■■■□ 3.2
CDR2-202ENST00000561630 IFT172Q9UG01 1749 aa35.02■■■■□ 3.2
CDR2-202ENST00000561630 PIK3C2GO75747 1445 aa35■■■■□ 3.19
CDR2-202ENST00000561630 ROBO2Q9HCK4 1378 aa34.99■■■■□ 3.19
CDR2-202ENST00000561630 ADGRL3Q9HAR2 1447 aa34.98■■■■□ 3.19
CDR2-202ENST00000561630 MYOM2P54296 1465 aa34.93■■■■□ 3.18
CDR2-202ENST00000561630 NRXN1Q9ULB1 1477 aa34.93■■■■□ 3.18
CDR2-202ENST00000561630 MED1Q15648 1581 aaPredicted RBP34.9■■■■□ 3.18
CDR2-202ENST00000561630 C14orf93Q9H972 538 aaKnown RBP34.89■■■■□ 3.18
CDR2-202ENST00000561630 TMEM132EQ6IEE7 984 aa34.88■■■■□ 3.17
CDR2-202ENST00000561630 MST1RQ04912 1400 aa34.88■■■■□ 3.17
CDR2-202ENST00000561630 LRPPRCP42704 1394 aaKnown RBP34.87■■■■□ 3.17
CDR2-202ENST00000561630 ASXL1Q8IXJ9 1541 aa34.86■■■■□ 3.17
CDR2-202ENST00000561630 BRINP3Q76B58 766 aa34.86■■■■□ 3.17
CDR2-202ENST00000561630 TECPR2O15040 1411 aa34.86■■■■□ 3.17
CDR2-202ENST00000561630 ABCC11Q96J66 1382 aa34.86■■■■□ 3.17
CDR2-202ENST00000561630 NALCNQ8IZF0 1738 aa34.85■■■■□ 3.17
CDR2-202ENST00000561630 STK26Q9P289 416 aa34.85■■■■□ 3.17
CDR2-202ENST00000561630 CFAP70Q5T0N1 1121 aa34.83■■■■□ 3.17
CDR2-202ENST00000561630 YTHDC2Q9H6S0 1430 aaKnown RBP34.81■■■■□ 3.16
CDR2-202ENST00000561630 ILDR2Q71H61 639 aa34.8■■■■□ 3.16
CDR2-202ENST00000561630 STAC3Q96MF2 364 aa34.8■■■■□ 3.16
CDR2-202ENST00000561630 PHLPP1O60346 1717 aa34.79■■■■□ 3.16
CDR2-202ENST00000561630 DCAF11Q8TEB1 546 aa34.79■■■■□ 3.16
CDR2-202ENST00000561630 AHDC1Q5TGY3 1603 aaPredicted RBP34.78■■■■□ 3.16
CDR2-202ENST00000561630 DHX57Q6P158 1386 aaKnown RBP34.76■■■■□ 3.16
CDR2-202ENST00000561630 WAPLQ7Z5K2 1190 aa34.76■■■■□ 3.16
CDR2-202ENST00000561630 KDM2AQ9Y2K7 1162 aa34.76■■■■□ 3.16
CDR2-202ENST00000561630 LAMC1P11047 1609 aa34.75■■■■□ 3.15
CDR2-202ENST00000561630 COL16A1Q07092 1604 aaPredicted RBP34.75■■■■□ 3.15
CDR2-202ENST00000561630 JCADQ9P266 1359 aa34.74■■■■□ 3.15
CDR2-202ENST00000561630 C1orf167Q5SNV9 1468 aa34.74■■■■□ 3.15
CDR2-202ENST00000561630 SIRT1Q96EB6 747 aa34.74■■■■□ 3.15
CDR2-202ENST00000561630 PHF23Q9BUL5 403 aaPredicted RBP34.71■■■■□ 3.15
CDR2-202ENST00000561630 KNDC1Q76NI1 1749 aa34.71■■■■□ 3.15
CDR2-202ENST00000561630 PLEKHH1Q9ULM0 1364 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms