RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-215ENST00000560935 LRRC7Q96NW7 1537 aa30.06■■■□□ 2.4
IPO4-215ENST00000560935 BCANQ96GW7 911 aa30.06■■■□□ 2.4
IPO4-215ENST00000560935 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.05■■■□□ 2.4
IPO4-215ENST00000560935 PLEKHG1Q9ULL1 1385 aa30.04■■■□□ 2.4
IPO4-215ENST00000560935 SLC26A8Q96RN1 970 aa30.04■■■□□ 2.4
IPO4-215ENST00000560935 TRPM2O94759 1503 aa30.02■■■□□ 2.4
IPO4-215ENST00000560935 TOM1O60784 492 aa30.02■■■□□ 2.4
IPO4-215ENST00000560935 SLC4A1APQ9BWU0 796 aaKnown RBP29.99■■■□□ 2.39
IPO4-215ENST00000560935 CLTCL1P53675 1640 aa29.97■■■□□ 2.39
IPO4-215ENST00000560935 KCNA6P17658 529 aa29.96■■■□□ 2.39
IPO4-215ENST00000560935 SENP3Q9H4L4 574 aaPredicted RBP29.96■■■□□ 2.39
IPO4-215ENST00000560935 SCAF1Q9H7N4 1312 aaKnown RBP29.95■■■□□ 2.38
IPO4-215ENST00000560935 NWD1Q149M9 1564 aa29.94■■■□□ 2.38
IPO4-215ENST00000560935 NUTM2DQ5VT03 806 aaPredicted RBP29.94■■■□□ 2.38
IPO4-215ENST00000560935 KIF1BO60333 1816 aa29.93■■■□□ 2.38
IPO4-215ENST00000560935 XIRP1Q702N8 1843 aaKnown RBP29.92■■■□□ 2.38
IPO4-215ENST00000560935 PIP4K2BP78356 416 aa29.92■■■□□ 2.38
IPO4-215ENST00000560935 ZNF326Q5BKZ1 582 aaKnown RBP29.92■■■□□ 2.38
IPO4-215ENST00000560935 DIP2AQ14689 1571 aa29.91■■■□□ 2.38
IPO4-215ENST00000560935 NKTRP30414 1462 aaKnown RBP29.91■■■□□ 2.38
IPO4-215ENST00000560935 TBX22Q9Y458 520 aa29.9■■■□□ 2.38
IPO4-215ENST00000560935 CHD2O14647 1828 aaKnown RBP29.89■■■□□ 2.38
IPO4-215ENST00000560935 ALKQ9UM73 1620 aa29.89■■■□□ 2.37
IPO4-215ENST00000560935 ADAMTS13Q76LX8 1427 aa29.88■■■□□ 2.37
IPO4-215ENST00000560935 ACIN1Q9UKV3 1341 aaKnown RBP29.87■■■□□ 2.37
IPO4-215ENST00000560935 SETD5Q9C0A6 1442 aa29.87■■■□□ 2.37
IPO4-215ENST00000560935 PROSER2Q86WR7 435 aaPredicted RBP29.86■■■□□ 2.37
IPO4-215ENST00000560935 TMEM94Q12767 1356 aa29.86■■■□□ 2.37
IPO4-215ENST00000560935 NEXMIFQ5QGS0 1516 aa29.82■■■□□ 2.36
IPO4-215ENST00000560935 PIK3R4Q99570 1358 aa29.82■■■□□ 2.36
IPO4-215ENST00000560935 MPHOSPH9Q99550 1183 aa29.81■■■□□ 2.36
IPO4-215ENST00000560935 SETBP1Q9Y6X0 1596 aa29.81■■■□□ 2.36
IPO4-215ENST00000560935 FOXD1Q16676 465 aa29.79■■■□□ 2.36
IPO4-215ENST00000560935 NRXN3Q9Y4C0 1643 aa29.78■■■□□ 2.36
IPO4-215ENST00000560935 HSPA1LP34931 641 aa29.76■■■□□ 2.35
IPO4-215ENST00000560935 RBM33Q96EV2 1170 aaKnown RBP29.76■■■□□ 2.35
IPO4-215ENST00000560935 CCDC144AA2RUR9 1427 aa29.75■■■□□ 2.35
IPO4-215ENST00000560935 RAB3GAP2Q9H2M9 1393 aa29.75■■■□□ 2.35
IPO4-215ENST00000560935 MSH6P52701 1360 aa29.73■■■□□ 2.35
IPO4-215ENST00000560935 RPGRIP1LQ68CZ1 1315 aa29.71■■■□□ 2.35
IPO4-215ENST00000560935 NCOA3Q9Y6Q9 1424 aa29.7■■■□□ 2.34
IPO4-215ENST00000560935 VGFO15240 615 aaPredicted RBP29.69■■■□□ 2.34
IPO4-215ENST00000560935 PPLO60437 1756 aa29.68■■■□□ 2.34
IPO4-215ENST00000560935 AMOTL2Q9Y2J4 779 aa29.68■■■□□ 2.34
IPO4-215ENST00000560935 PTPRUQ92729 1446 aa29.68■■■□□ 2.34
IPO4-215ENST00000560935 DISP3Q9P2K9 1392 aa29.66■■■□□ 2.34
IPO4-215ENST00000560935 XRN1Q8IZH2 1706 aaKnown RBP29.66■■■□□ 2.34
IPO4-215ENST00000560935 C14orf37Q86TY3 774 aa29.65■■■□□ 2.34
IPO4-215ENST00000560935 FAM135BQ49AJ0 1406 aa29.64■■■□□ 2.34
IPO4-215ENST00000560935 METP08581 1390 aa29.64■■■□□ 2.33
IPO4-215ENST00000560935 SPATA31E1Q6ZUB1 1445 aa29.61■■■□□ 2.33
IPO4-215ENST00000560935 ROBO1Q9Y6N7 1651 aa29.6■■■□□ 2.33
IPO4-215ENST00000560935 SETD1AO15047 1707 aaKnown RBP29.58■■■□□ 2.33
IPO4-215ENST00000560935 RGL3Q3MIN7 710 aa29.58■■■□□ 2.33
IPO4-215ENST00000560935 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.57■■■□□ 2.32
IPO4-215ENST00000560935 IFT172Q9UG01 1749 aa29.57■■■□□ 2.32
IPO4-215ENST00000560935 HRCP23327 699 aa29.56■■■□□ 2.32
IPO4-215ENST00000560935 C19orf44Q9H6X5 657 aa29.56■■■□□ 2.32
IPO4-215ENST00000560935 SLAIN2Q9P270 581 aa29.56■■■□□ 2.32
IPO4-215ENST00000560935 ANKRD30BQ9BXX2 1392 aa29.54■■■□□ 2.32
IPO4-215ENST00000560935 CADPS2Q86UW7 1296 aa29.54■■■□□ 2.32
IPO4-215ENST00000560935 ATF3P18847 181 aa29.53■■■□□ 2.32
IPO4-215ENST00000560935 MED1Q15648 1581 aaPredicted RBP29.51■■■□□ 2.31
IPO4-215ENST00000560935 ADGRF5Q8IZF2 1346 aa29.49■■■□□ 2.31
IPO4-215ENST00000560935 DCCP43146 1447 aa29.49■■■□□ 2.31
IPO4-215ENST00000560935 PTCH1Q13635 1447 aa29.47■■■□□ 2.31
IPO4-215ENST00000560935 PRAG1Q86YV5 1406 aa29.45■■■□□ 2.3
IPO4-215ENST00000560935 ADGRL3Q9HAR2 1447 aa29.45■■■□□ 2.3
IPO4-215ENST00000560935 PHLPP1O60346 1717 aa29.43■■■□□ 2.3
IPO4-215ENST00000560935 NALCNQ8IZF0 1738 aa29.43■■■□□ 2.3
IPO4-215ENST00000560935 PIK3C2GO75747 1445 aa29.42■■■□□ 2.3
IPO4-215ENST00000560935 ROBO2Q9HCK4 1378 aa29.4■■■□□ 2.3
IPO4-215ENST00000560935 MYOM2P54296 1465 aa29.39■■■□□ 2.3
IPO4-215ENST00000560935 MST1RQ04912 1400 aa29.36■■■□□ 2.29
IPO4-215ENST00000560935 NRXN1Q9ULB1 1477 aa29.35■■■□□ 2.29
IPO4-215ENST00000560935 AHDC1Q5TGY3 1603 aaPredicted RBP29.34■■■□□ 2.29
IPO4-215ENST00000560935 ILDR2Q71H61 639 aa29.34■■■□□ 2.29
IPO4-215ENST00000560935 ASXL1Q8IXJ9 1541 aa29.34■■■□□ 2.29
IPO4-215ENST00000560935 LAMC1P11047 1609 aa29.34■■■□□ 2.29
IPO4-215ENST00000560935 COL16A1Q07092 1604 aaPredicted RBP29.34■■■□□ 2.29
IPO4-215ENST00000560935 PHF23Q9BUL5 403 aaPredicted RBP29.33■■■□□ 2.29
IPO4-215ENST00000560935 KNDC1Q76NI1 1749 aa29.32■■■□□ 2.28
IPO4-215ENST00000560935 LRPPRCP42704 1394 aaKnown RBP29.32■■■□□ 2.28
IPO4-215ENST00000560935 BRINP3Q76B58 766 aa29.32■■■□□ 2.28
IPO4-215ENST00000560935 TECPR2O15040 1411 aa29.31■■■□□ 2.28
IPO4-215ENST00000560935 STK26Q9P289 416 aa29.3■■■□□ 2.28
IPO4-215ENST00000560935 JCADQ9P266 1359 aa29.29■■■□□ 2.28
IPO4-215ENST00000560935 TMEM132EQ6IEE7 984 aa29.29■■■□□ 2.28
IPO4-215ENST00000560935 C14orf93Q9H972 538 aaKnown RBP29.29■■■□□ 2.28
IPO4-215ENST00000560935 ABCC11Q96J66 1382 aa29.28■■■□□ 2.28
IPO4-215ENST00000560935 YTHDC2Q9H6S0 1430 aaKnown RBP29.27■■■□□ 2.28
IPO4-215ENST00000560935 C1orf167Q5SNV9 1468 aa29.24■■■□□ 2.27
IPO4-215ENST00000560935 NHSL1Q5SYE7 1610 aa29.24■■■□□ 2.27
IPO4-215ENST00000560935 CFAP70Q5T0N1 1121 aa29.24■■■□□ 2.27
IPO4-215ENST00000560935 CDC42BPGQ6DT37 1551 aa29.23■■■□□ 2.27
IPO4-215ENST00000560935 DHX57Q6P158 1386 aaKnown RBP29.23■■■□□ 2.27
IPO4-215ENST00000560935 DCAF11Q8TEB1 546 aa29.22■■■□□ 2.27
IPO4-215ENST00000560935 WAPLQ7Z5K2 1190 aa29.21■■■□□ 2.27
IPO4-215ENST00000560935 STAC3Q96MF2 364 aa29.21■■■□□ 2.27
IPO4-215ENST00000560935 KDM2AQ9Y2K7 1162 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms