RNA–Protein interactions for RNA: ENST00000560899.5

ETFA-218, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 5

Gene ETFA, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-218ENST00000560899 FBXO41Q8TF61 875 aa25.73■■□□□ 1.71
ETFA-218ENST00000560899 HDGFP51858 240 aaKnown RBP25.71■■□□□ 1.71
ETFA-218ENST00000560899 PLEKHG1Q9ULL1 1385 aa25.7■■□□□ 1.71
ETFA-218ENST00000560899 STRCP1A6NGW2 1772 aa25.69■■□□□ 1.7
ETFA-218ENST00000560899 HRCP23327 699 aa25.69■■□□□ 1.7
ETFA-218ENST00000560899 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.69■■□□□ 1.7
ETFA-218ENST00000560899 MPHOSPH9Q99550 1183 aa25.68■■□□□ 1.7
ETFA-218ENST00000560899 DIP2AQ14689 1571 aa25.67■■□□□ 1.7
ETFA-218ENST00000560899 ILDR1Q86SU0 546 aaPredicted RBP25.66■■□□□ 1.7
ETFA-218ENST00000560899 CHGAP10645 457 aaKnown RBP25.65■■□□□ 1.7
ETFA-218ENST00000560899 NEXMIFQ5QGS0 1516 aa25.64■■□□□ 1.7
ETFA-218ENST00000560899 NWD1Q149M9 1564 aa25.64■■□□□ 1.69
ETFA-218ENST00000560899 SETBP1Q9Y6X0 1596 aa25.61■■□□□ 1.69
ETFA-218ENST00000560899 PPP1R15AO75807 674 aaPredicted RBP25.61■■□□□ 1.69
ETFA-218ENST00000560899 CCDC144AA2RUR9 1427 aa25.61■■□□□ 1.69
ETFA-218ENST00000560899 NRXN3Q9Y4C0 1643 aa25.58■■□□□ 1.69
ETFA-218ENST00000560899 NKTRP30414 1462 aaKnown RBP25.58■■□□□ 1.69
ETFA-218ENST00000560899 CHD2O14647 1828 aaKnown RBP25.58■■□□□ 1.68
ETFA-218ENST00000560899 LRRC7Q96NW7 1537 aa25.58■■□□□ 1.68
ETFA-218ENST00000560899 PPLO60437 1756 aa25.57■■□□□ 1.68
ETFA-218ENST00000560899 ADAMTS13Q76LX8 1427 aa25.57■■□□□ 1.68
ETFA-218ENST00000560899 FOXD1Q16676 465 aa25.56■■□□□ 1.68
ETFA-218ENST00000560899 PIK3R4Q99570 1358 aa25.55■■□□□ 1.68
ETFA-218ENST00000560899 SLC26A8Q96RN1 970 aa25.54■■□□□ 1.68
ETFA-218ENST00000560899 TBX22Q9Y458 520 aa25.54■■□□□ 1.68
ETFA-218ENST00000560899 RPGRIP1LQ68CZ1 1315 aa25.54■■□□□ 1.68
ETFA-218ENST00000560899 SPATA31E1Q6ZUB1 1445 aa25.54■■□□□ 1.68
ETFA-218ENST00000560899 ZNF326Q5BKZ1 582 aaKnown RBP25.53■■□□□ 1.68
ETFA-218ENST00000560899 IFT172Q9UG01 1749 aa25.53■■□□□ 1.68
ETFA-218ENST00000560899 XIRP1Q702N8 1843 aaKnown RBP25.53■■□□□ 1.68
ETFA-218ENST00000560899 KCNA6P17658 529 aa25.52■■□□□ 1.68
ETFA-218ENST00000560899 BCANQ96GW7 911 aa25.49■■□□□ 1.67
ETFA-218ENST00000560899 NUTM2DQ5VT03 806 aaPredicted RBP25.47■■□□□ 1.67
ETFA-218ENST00000560899 SETD1AO15047 1707 aaKnown RBP25.46■■□□□ 1.67
ETFA-218ENST00000560899 ANKRD30BQ9BXX2 1392 aa25.46■■□□□ 1.67
ETFA-218ENST00000560899 VGFO15240 615 aaPredicted RBP25.45■■□□□ 1.66
ETFA-218ENST00000560899 XRN1Q8IZH2 1706 aaKnown RBP25.45■■□□□ 1.66
ETFA-218ENST00000560899 ALKQ9UM73 1620 aa25.44■■□□□ 1.66
ETFA-218ENST00000560899 NCOA3Q9Y6Q9 1424 aa25.4■■□□□ 1.66
ETFA-218ENST00000560899 UBAP1LF5GYI3 381 aa25.4■■□□□ 1.66
ETFA-218ENST00000560899 TMEM94Q12767 1356 aa25.39■■□□□ 1.65
ETFA-218ENST00000560899 TOM1O60784 492 aa25.38■■□□□ 1.65
ETFA-218ENST00000560899 PRAG1Q86YV5 1406 aa25.37■■□□□ 1.65
ETFA-218ENST00000560899 PTPRUQ92729 1446 aa25.37■■□□□ 1.65
ETFA-218ENST00000560899 MYOM2P54296 1465 aa25.37■■□□□ 1.65
ETFA-218ENST00000560899 METP08581 1390 aa25.35■■□□□ 1.65
ETFA-218ENST00000560899 SENP3Q9H4L4 574 aaPredicted RBP25.35■■□□□ 1.65
ETFA-218ENST00000560899 PROSER2Q86WR7 435 aaPredicted RBP25.34■■□□□ 1.65
ETFA-218ENST00000560899 NRXN1Q9ULB1 1477 aa25.34■■□□□ 1.65
ETFA-218ENST00000560899 PIK3C2GO75747 1445 aa25.33■■□□□ 1.65
ETFA-218ENST00000560899 TRIM26Q12899 539 aaPredicted RBP25.32■■□□□ 1.64
ETFA-218ENST00000560899 RGL3Q3MIN7 710 aa25.32■■□□□ 1.64
ETFA-218ENST00000560899 LAMC1P11047 1609 aa25.32■■□□□ 1.64
ETFA-218ENST00000560899 AMOTL2Q9Y2J4 779 aa25.3■■□□□ 1.64
ETFA-218ENST00000560899 PTCH1Q13635 1447 aa25.29■■□□□ 1.64
ETFA-218ENST00000560899 ADGRF5Q8IZF2 1346 aa25.29■■□□□ 1.64
ETFA-218ENST00000560899 MSH6P52701 1360 aa25.29■■□□□ 1.64
ETFA-218ENST00000560899 STAC3Q96MF2 364 aa25.25■■□□□ 1.63
ETFA-218ENST00000560899 DCCP43146 1447 aa25.25■■□□□ 1.63
ETFA-218ENST00000560899 KNDC1Q76NI1 1749 aa25.25■■□□□ 1.63
ETFA-218ENST00000560899 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.25■■□□□ 1.63
ETFA-218ENST00000560899 ASXL1Q8IXJ9 1541 aa25.23■■□□□ 1.63
ETFA-218ENST00000560899 TECPR2O15040 1411 aa25.22■■□□□ 1.63
ETFA-218ENST00000560899 FAM135BQ49AJ0 1406 aa25.2■■□□□ 1.63
ETFA-218ENST00000560899 NALCNQ8IZF0 1738 aa25.2■■□□□ 1.63
ETFA-218ENST00000560899 PIP4K2BP78356 416 aa25.2■■□□□ 1.62
ETFA-218ENST00000560899 RBM33Q96EV2 1170 aaKnown RBP25.2■■□□□ 1.62
ETFA-218ENST00000560899 C19orf44Q9H6X5 657 aa25.19■■□□□ 1.62
ETFA-218ENST00000560899 ADGRL3Q9HAR2 1447 aa25.19■■□□□ 1.62
ETFA-218ENST00000560899 ROBO1Q9Y6N7 1651 aa25.17■■□□□ 1.62
ETFA-218ENST00000560899 SCAF1Q9H7N4 1312 aaKnown RBP25.16■■□□□ 1.62
ETFA-218ENST00000560899 C14orf93Q9H972 538 aaKnown RBP25.16■■□□□ 1.62
ETFA-218ENST00000560899 LRPPRCP42704 1394 aaKnown RBP25.16■■□□□ 1.62
ETFA-218ENST00000560899 DHX57Q6P158 1386 aaKnown RBP25.16■■□□□ 1.62
ETFA-218ENST00000560899 ROBO2Q9HCK4 1378 aa25.16■■□□□ 1.62
ETFA-218ENST00000560899 CADPS2Q86UW7 1296 aa25.15■■□□□ 1.62
ETFA-218ENST00000560899 ABCC11Q96J66 1382 aa25.15■■□□□ 1.62
ETFA-218ENST00000560899 C14orf37Q86TY3 774 aa25.13■■□□□ 1.61
ETFA-218ENST00000560899 YTHDC2Q9H6S0 1430 aaKnown RBP25.12■■□□□ 1.61
ETFA-218ENST00000560899 ADGRB1O14514 1584 aa25.11■■□□□ 1.61
ETFA-218ENST00000560899 KIAA1210Q9ULL0 1709 aa25.11■■□□□ 1.61
ETFA-218ENST00000560899 ATF3P18847 181 aa25.1■■□□□ 1.61
ETFA-218ENST00000560899 DCAF11Q8TEB1 546 aa25.1■■□□□ 1.61
ETFA-218ENST00000560899 SLAIN2Q9P270 581 aa25.1■■□□□ 1.61
ETFA-218ENST00000560899 HSPA1LP34931 641 aa25.09■■□□□ 1.61
ETFA-218ENST00000560899 CDC42BPGQ6DT37 1551 aa25.09■■□□□ 1.61
ETFA-218ENST00000560899 DLC1Q96QB1 1528 aa25.08■■□□□ 1.61
ETFA-218ENST00000560899 MST1RQ04912 1400 aa25.06■■□□□ 1.6
ETFA-218ENST00000560899 CFAP70Q5T0N1 1121 aa25.06■■□□□ 1.6
ETFA-218ENST00000560899 SIRT1Q96EB6 747 aa25.06■■□□□ 1.6
ETFA-218ENST00000560899 TMEM132EQ6IEE7 984 aa25.04■■□□□ 1.6
ETFA-218ENST00000560899 AHDC1Q5TGY3 1603 aaPredicted RBP25.04■■□□□ 1.6
ETFA-218ENST00000560899 KDM2AQ9Y2K7 1162 aa25.02■■□□□ 1.6
ETFA-218ENST00000560899 PHLPP1O60346 1717 aa25.01■■□□□ 1.59
ETFA-218ENST00000560899 STK26Q9P289 416 aa24.99■■□□□ 1.59
ETFA-218ENST00000560899 COL16A1Q07092 1604 aaPredicted RBP24.98■■□□□ 1.59
ETFA-218ENST00000560899 NHSL1Q5SYE7 1610 aa24.98■■□□□ 1.59
ETFA-218ENST00000560899 ADGRB2O60241 1585 aa24.97■■□□□ 1.59
ETFA-218ENST00000560899 C1orf167Q5SNV9 1468 aa24.96■■□□□ 1.59
ETFA-218ENST00000560899 ARHGEF28Q8N1W1 1705 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms