RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 UBAP1LF5GYI3 381 aa23.09■■□□□ 1.29
RABGGTA-219ENST00000560871 HRCP23327 699 aa23.08■■□□□ 1.29
RABGGTA-219ENST00000560871 MPHOSPH9Q99550 1183 aa23.07■■□□□ 1.28
RABGGTA-219ENST00000560871 LRRC7Q96NW7 1537 aa23.04■■□□□ 1.28
RABGGTA-219ENST00000560871 ZFYVE9O95405 1425 aa23.04■■□□□ 1.28
RABGGTA-219ENST00000560871 FOXD1Q16676 465 aa23.02■■□□□ 1.28
RABGGTA-219ENST00000560871 XIRP1Q702N8 1843 aaKnown RBP22.99■■□□□ 1.27
RABGGTA-219ENST00000560871 TOM1O60784 492 aa22.99■■□□□ 1.27
RABGGTA-219ENST00000560871 TRIM26Q12899 539 aaPredicted RBP22.99■■□□□ 1.27
RABGGTA-219ENST00000560871 RIMS2Q9UQ26 1411 aa22.99■■□□□ 1.27
RABGGTA-219ENST00000560871 ALKQ9UM73 1620 aa22.98■■□□□ 1.27
RABGGTA-219ENST00000560871 KIF1BO60333 1816 aa22.96■■□□□ 1.27
RABGGTA-219ENST00000560871 HDGFP51858 240 aaKnown RBP22.96■■□□□ 1.27
RABGGTA-219ENST00000560871 CHGAP10645 457 aaKnown RBP22.95■■□□□ 1.26
RABGGTA-219ENST00000560871 SLC26A8Q96RN1 970 aa22.95■■□□□ 1.26
RABGGTA-219ENST00000560871 CCDC144AA2RUR9 1427 aa22.94■■□□□ 1.26
RABGGTA-219ENST00000560871 PLEKHG1Q9ULL1 1385 aa22.94■■□□□ 1.26
RABGGTA-219ENST00000560871 NEXMIFQ5QGS0 1516 aa22.93■■□□□ 1.26
RABGGTA-219ENST00000560871 KCNA6P17658 529 aa22.93■■□□□ 1.26
RABGGTA-219ENST00000560871 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.92■■□□□ 1.26
RABGGTA-219ENST00000560871 CHD2O14647 1828 aaKnown RBP22.92■■□□□ 1.26
RABGGTA-219ENST00000560871 NWD1Q149M9 1564 aa22.91■■□□□ 1.26
RABGGTA-219ENST00000560871 PIP4K2BP78356 416 aa22.9■■□□□ 1.26
RABGGTA-219ENST00000560871 BCANQ96GW7 911 aa22.9■■□□□ 1.26
RABGGTA-219ENST00000560871 SPATA31E1Q6ZUB1 1445 aa22.9■■□□□ 1.26
RABGGTA-219ENST00000560871 PPP1R15AO75807 674 aaPredicted RBP22.89■■□□□ 1.25
RABGGTA-219ENST00000560871 ANKRD30BQ9BXX2 1392 aa22.89■■□□□ 1.25
RABGGTA-219ENST00000560871 SCAF1Q9H7N4 1312 aaKnown RBP22.88■■□□□ 1.25
RABGGTA-219ENST00000560871 TBX22Q9Y458 520 aa22.86■■□□□ 1.25
RABGGTA-219ENST00000560871 NUTM2DQ5VT03 806 aaPredicted RBP22.85■■□□□ 1.25
RABGGTA-219ENST00000560871 SENP3Q9H4L4 574 aaPredicted RBP22.85■■□□□ 1.25
RABGGTA-219ENST00000560871 NRXN3Q9Y4C0 1643 aa22.85■■□□□ 1.25
RABGGTA-219ENST00000560871 NKTRP30414 1462 aaKnown RBP22.85■■□□□ 1.25
RABGGTA-219ENST00000560871 SETBP1Q9Y6X0 1596 aa22.84■■□□□ 1.25
RABGGTA-219ENST00000560871 ADAMTS13Q76LX8 1427 aa22.84■■□□□ 1.25
RABGGTA-219ENST00000560871 HSPA1LP34931 641 aa22.84■■□□□ 1.25
RABGGTA-219ENST00000560871 TMEM94Q12767 1356 aa22.84■■□□□ 1.25
RABGGTA-219ENST00000560871 DIP2AQ14689 1571 aa22.84■■□□□ 1.25
RABGGTA-219ENST00000560871 PPLO60437 1756 aa22.84■■□□□ 1.25
RABGGTA-219ENST00000560871 IFT172Q9UG01 1749 aa22.83■■□□□ 1.25
RABGGTA-219ENST00000560871 ZNF326Q5BKZ1 582 aaKnown RBP22.83■■□□□ 1.25
RABGGTA-219ENST00000560871 PROSER2Q86WR7 435 aaPredicted RBP22.83■■□□□ 1.25
RABGGTA-219ENST00000560871 DISP3Q9P2K9 1392 aa22.79■■□□□ 1.24
RABGGTA-219ENST00000560871 RPGRIP1LQ68CZ1 1315 aa22.79■■□□□ 1.24
RABGGTA-219ENST00000560871 PIK3R4Q99570 1358 aa22.78■■□□□ 1.24
RABGGTA-219ENST00000560871 RBM33Q96EV2 1170 aaKnown RBP22.77■■□□□ 1.24
RABGGTA-219ENST00000560871 DHX57Q6P158 1386 aaKnown RBP22.76■■□□□ 1.23
RABGGTA-219ENST00000560871 SETD1AO15047 1707 aaKnown RBP22.74■■□□□ 1.23
RABGGTA-219ENST00000560871 RGL3Q3MIN7 710 aa22.72■■□□□ 1.23
RABGGTA-219ENST00000560871 NCOA3Q9Y6Q9 1424 aa22.72■■□□□ 1.23
RABGGTA-219ENST00000560871 MYOM2P54296 1465 aa22.72■■□□□ 1.23
RABGGTA-219ENST00000560871 VGFO15240 615 aaPredicted RBP22.71■■□□□ 1.23
RABGGTA-219ENST00000560871 FAM135BQ49AJ0 1406 aa22.71■■□□□ 1.23
RABGGTA-219ENST00000560871 PTPRUQ92729 1446 aa22.71■■□□□ 1.23
RABGGTA-219ENST00000560871 MSH6P52701 1360 aa22.7■■□□□ 1.22
RABGGTA-219ENST00000560871 NRXN1Q9ULB1 1477 aa22.69■■□□□ 1.22
RABGGTA-219ENST00000560871 XRN1Q8IZH2 1706 aaKnown RBP22.68■■□□□ 1.22
RABGGTA-219ENST00000560871 ROBO1Q9Y6N7 1651 aa22.68■■□□□ 1.22
RABGGTA-219ENST00000560871 PIK3C2GO75747 1445 aa22.68■■□□□ 1.22
RABGGTA-219ENST00000560871 AMOTL2Q9Y2J4 779 aa22.68■■□□□ 1.22
RABGGTA-219ENST00000560871 ADGRF5Q8IZF2 1346 aa22.67■■□□□ 1.22
RABGGTA-219ENST00000560871 METP08581 1390 aa22.66■■□□□ 1.22
RABGGTA-219ENST00000560871 MED1Q15648 1581 aaPredicted RBP22.66■■□□□ 1.22
RABGGTA-219ENST00000560871 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.65■■□□□ 1.22
RABGGTA-219ENST00000560871 ILDR2Q71H61 639 aa22.64■■□□□ 1.21
RABGGTA-219ENST00000560871 PCGF6Q9BYE7 350 aa22.63■■□□□ 1.21
RABGGTA-219ENST00000560871 SLAIN2Q9P270 581 aa22.63■■□□□ 1.21
RABGGTA-219ENST00000560871 ASXL1Q8IXJ9 1541 aa22.62■■□□□ 1.21
RABGGTA-219ENST00000560871 PRAG1Q86YV5 1406 aa22.61■■□□□ 1.21
RABGGTA-219ENST00000560871 C19orf44Q9H6X5 657 aa22.6■■□□□ 1.21
RABGGTA-219ENST00000560871 LAMC1P11047 1609 aa22.6■■□□□ 1.21
RABGGTA-219ENST00000560871 C14orf37Q86TY3 774 aa22.59■■□□□ 1.21
RABGGTA-219ENST00000560871 CADPS2Q86UW7 1296 aa22.56■■□□□ 1.2
RABGGTA-219ENST00000560871 PTCH1Q13635 1447 aa22.56■■□□□ 1.2
RABGGTA-219ENST00000560871 PHLPP1O60346 1717 aa22.55■■□□□ 1.2
RABGGTA-219ENST00000560871 SIN3AQ96ST3 1273 aa22.55■■□□□ 1.2
RABGGTA-219ENST00000560871 ATF3P18847 181 aa22.54■■□□□ 1.2
RABGGTA-219ENST00000560871 DCAF11Q8TEB1 546 aa22.53■■□□□ 1.2
RABGGTA-219ENST00000560871 STAC3Q96MF2 364 aa22.53■■□□□ 1.2
RABGGTA-219ENST00000560871 DCCP43146 1447 aa22.53■■□□□ 1.2
RABGGTA-219ENST00000560871 KNDC1Q76NI1 1749 aa22.53■■□□□ 1.2
RABGGTA-219ENST00000560871 TECPR2O15040 1411 aa22.52■■□□□ 1.2
RABGGTA-219ENST00000560871 NALCNQ8IZF0 1738 aa22.51■■□□□ 1.19
RABGGTA-219ENST00000560871 ADGRB1O14514 1584 aa22.51■■□□□ 1.19
RABGGTA-219ENST00000560871 C14orf93Q9H972 538 aaKnown RBP22.51■■□□□ 1.19
RABGGTA-219ENST00000560871 COL16A1Q07092 1604 aaPredicted RBP22.49■■□□□ 1.19
RABGGTA-219ENST00000560871 ADGRL3Q9HAR2 1447 aa22.48■■□□□ 1.19
RABGGTA-219ENST00000560871 CFAP70Q5T0N1 1121 aa22.48■■□□□ 1.19
RABGGTA-219ENST00000560871 KDM2AQ9Y2K7 1162 aa22.48■■□□□ 1.19
RABGGTA-219ENST00000560871 LRPPRCP42704 1394 aaKnown RBP22.48■■□□□ 1.19
RABGGTA-219ENST00000560871 ROBO2Q9HCK4 1378 aa22.48■■□□□ 1.19
RABGGTA-219ENST00000560871 YTHDC2Q9H6S0 1430 aaKnown RBP22.47■■□□□ 1.19
RABGGTA-219ENST00000560871 AHDC1Q5TGY3 1603 aaPredicted RBP22.46■■□□□ 1.19
RABGGTA-219ENST00000560871 MST1RQ04912 1400 aa22.46■■□□□ 1.19
RABGGTA-219ENST00000560871 NEUROD1Q13562 356 aa22.45■■□□□ 1.18
RABGGTA-219ENST00000560871 L3MBTL2Q969R5 705 aa22.45■■□□□ 1.18
RABGGTA-219ENST00000560871 ABCC11Q96J66 1382 aa22.45■■□□□ 1.18
RABGGTA-219ENST00000560871 KIAA1210Q9ULL0 1709 aa22.45■■□□□ 1.18
RABGGTA-219ENST00000560871 SOCS7O14512 581 aa22.44■■□□□ 1.18
RABGGTA-219ENST00000560871 TMEM132EQ6IEE7 984 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms