RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 CLTCL1P53675 1640 aa21.25■□□□□ 0.99
TNFAIP2-207ENST00000560562 SLC26A8Q96RN1 970 aa21.25■□□□□ 0.99
TNFAIP2-207ENST00000560562 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
TNFAIP2-207ENST00000560562 CHD2O14647 1828 aaKnown RBP21.25■□□□□ 0.99
TNFAIP2-207ENST00000560562 PLEKHG1Q9ULL1 1385 aa21.22■□□□□ 0.99
TNFAIP2-207ENST00000560562 TRPM2O94759 1503 aa21.21■□□□□ 0.99
TNFAIP2-207ENST00000560562 CHGAP10645 457 aaKnown RBP21.21■□□□□ 0.99
TNFAIP2-207ENST00000560562 PIP4K2BP78356 416 aa21.21■□□□□ 0.99
TNFAIP2-207ENST00000560562 NUTM2DQ5VT03 806 aaPredicted RBP21.2■□□□□ 0.98
TNFAIP2-207ENST00000560562 KIF1BO60333 1816 aa21.19■□□□□ 0.98
TNFAIP2-207ENST00000560562 TOM1O60784 492 aa21.19■□□□□ 0.98
TNFAIP2-207ENST00000560562 NRXN3Q9Y4C0 1643 aa21.19■□□□□ 0.98
TNFAIP2-207ENST00000560562 ADAMTS13Q76LX8 1427 aa21.17■□□□□ 0.98
TNFAIP2-207ENST00000560562 SCAF1Q9H7N4 1312 aaKnown RBP21.17■□□□□ 0.98
TNFAIP2-207ENST00000560562 KCNA6P17658 529 aa21.16■□□□□ 0.98
TNFAIP2-207ENST00000560562 NKTRP30414 1462 aaKnown RBP21.15■□□□□ 0.98
TNFAIP2-207ENST00000560562 TMEM94Q12767 1356 aa21.15■□□□□ 0.98
TNFAIP2-207ENST00000560562 PPP1R15AO75807 674 aaPredicted RBP21.14■□□□□ 0.98
TNFAIP2-207ENST00000560562 HSPA1LP34931 641 aa21.14■□□□□ 0.98
TNFAIP2-207ENST00000560562 DIP2AQ14689 1571 aa21.14■□□□□ 0.98
TNFAIP2-207ENST00000560562 RBM33Q96EV2 1170 aaKnown RBP21.13■□□□□ 0.97
TNFAIP2-207ENST00000560562 BCANQ96GW7 911 aa21.13■□□□□ 0.97
TNFAIP2-207ENST00000560562 NEXMIFQ5QGS0 1516 aa21.13■□□□□ 0.97
TNFAIP2-207ENST00000560562 TRIM52Q96A61 297 aa21.12■□□□□ 0.97
TNFAIP2-207ENST00000560562 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.12■□□□□ 0.97
TNFAIP2-207ENST00000560562 SETBP1Q9Y6X0 1596 aa21.1■□□□□ 0.97
TNFAIP2-207ENST00000560562 HDGFP51858 240 aaKnown RBP21.09■□□□□ 0.97
TNFAIP2-207ENST00000560562 TBX22Q9Y458 520 aa21.09■□□□□ 0.97
TNFAIP2-207ENST00000560562 DISP3Q9P2K9 1392 aa21.08■□□□□ 0.97
TNFAIP2-207ENST00000560562 PROSER2Q86WR7 435 aaPredicted RBP21.07■□□□□ 0.96
TNFAIP2-207ENST00000560562 SLC4A1APQ9BWU0 796 aaKnown RBP21.07■□□□□ 0.96
TNFAIP2-207ENST00000560562 PTPRUQ92729 1446 aa21.07■□□□□ 0.96
TNFAIP2-207ENST00000560562 XRN1Q8IZH2 1706 aaKnown RBP21.06■□□□□ 0.96
TNFAIP2-207ENST00000560562 SETD1AO15047 1707 aaKnown RBP21.06■□□□□ 0.96
TNFAIP2-207ENST00000560562 PPLO60437 1756 aa21.05■□□□□ 0.96
TNFAIP2-207ENST00000560562 FOXD1Q16676 465 aa21.05■□□□□ 0.96
TNFAIP2-207ENST00000560562 ROBO1Q9Y6N7 1651 aa21.05■□□□□ 0.96
TNFAIP2-207ENST00000560562 ZNF326Q5BKZ1 582 aaKnown RBP21.04■□□□□ 0.96
TNFAIP2-207ENST00000560562 MED1Q15648 1581 aaPredicted RBP21.03■□□□□ 0.96
TNFAIP2-207ENST00000560562 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.02■□□□□ 0.96
TNFAIP2-207ENST00000560562 PIK3R4Q99570 1358 aa21.02■□□□□ 0.95
TNFAIP2-207ENST00000560562 ILDR2Q71H61 639 aa21■□□□□ 0.95
TNFAIP2-207ENST00000560562 METP08581 1390 aa20.99■□□□□ 0.95
TNFAIP2-207ENST00000560562 IFT172Q9UG01 1749 aa20.99■□□□□ 0.95
TNFAIP2-207ENST00000560562 FAM135BQ49AJ0 1406 aa20.98■□□□□ 0.95
TNFAIP2-207ENST00000560562 SETD5Q9C0A6 1442 aa20.98■□□□□ 0.95
TNFAIP2-207ENST00000560562 MSH6P52701 1360 aa20.97■□□□□ 0.95
TNFAIP2-207ENST00000560562 MPHOSPH9Q99550 1183 aa20.97■□□□□ 0.95
TNFAIP2-207ENST00000560562 AMOTL2Q9Y2J4 779 aa20.96■□□□□ 0.95
TNFAIP2-207ENST00000560562 NCOA3Q9Y6Q9 1424 aa20.94■□□□□ 0.94
TNFAIP2-207ENST00000560562 RAB3GAP2Q9H2M9 1393 aa20.94■□□□□ 0.94
TNFAIP2-207ENST00000560562 SPATA31E1Q6ZUB1 1445 aa20.93■□□□□ 0.94
TNFAIP2-207ENST00000560562 NALCNQ8IZF0 1738 aa20.93■□□□□ 0.94
TNFAIP2-207ENST00000560562 CCDC144AA2RUR9 1427 aa20.92■□□□□ 0.94
TNFAIP2-207ENST00000560562 PHLPP1O60346 1717 aa20.92■□□□□ 0.94
TNFAIP2-207ENST00000560562 SLAIN2Q9P270 581 aa20.89■□□□□ 0.94
TNFAIP2-207ENST00000560562 COL16A1Q07092 1604 aaPredicted RBP20.87■□□□□ 0.93
TNFAIP2-207ENST00000560562 RPGRIP1LQ68CZ1 1315 aa20.87■□□□□ 0.93
TNFAIP2-207ENST00000560562 C14orf37Q86TY3 774 aa20.87■□□□□ 0.93
TNFAIP2-207ENST00000560562 VGFO15240 615 aaPredicted RBP20.86■□□□□ 0.93
TNFAIP2-207ENST00000560562 C19orf44Q9H6X5 657 aa20.86■□□□□ 0.93
TNFAIP2-207ENST00000560562 ADGRF5Q8IZF2 1346 aa20.84■□□□□ 0.93
TNFAIP2-207ENST00000560562 ASXL1Q8IXJ9 1541 aa20.84■□□□□ 0.93
TNFAIP2-207ENST00000560562 DCCP43146 1447 aa20.83■□□□□ 0.93
TNFAIP2-207ENST00000560562 PRAG1Q86YV5 1406 aa20.83■□□□□ 0.93
TNFAIP2-207ENST00000560562 RGL3Q3MIN7 710 aa20.83■□□□□ 0.93
TNFAIP2-207ENST00000560562 ROBO2Q9HCK4 1378 aa20.82■□□□□ 0.92
TNFAIP2-207ENST00000560562 PTCH1Q13635 1447 aa20.82■□□□□ 0.92
TNFAIP2-207ENST00000560562 ADGRL3Q9HAR2 1447 aa20.82■□□□□ 0.92
TNFAIP2-207ENST00000560562 AHDC1Q5TGY3 1603 aaPredicted RBP20.82■□□□□ 0.92
TNFAIP2-207ENST00000560562 CADPS2Q86UW7 1296 aa20.81■□□□□ 0.92
TNFAIP2-207ENST00000560562 MST1RQ04912 1400 aa20.81■□□□□ 0.92
TNFAIP2-207ENST00000560562 ATF3P18847 181 aa20.79■□□□□ 0.92
TNFAIP2-207ENST00000560562 NHSL1Q5SYE7 1610 aa20.79■□□□□ 0.92
TNFAIP2-207ENST00000560562 PIK3C2GO75747 1445 aa20.78■□□□□ 0.92
TNFAIP2-207ENST00000560562 KNDC1Q76NI1 1749 aa20.78■□□□□ 0.92
TNFAIP2-207ENST00000560562 ACIN1Q9UKV3 1341 aaKnown RBP20.78■□□□□ 0.92
TNFAIP2-207ENST00000560562 ANKRD30BQ9BXX2 1392 aa20.77■□□□□ 0.92
TNFAIP2-207ENST00000560562 BRINP3Q76B58 766 aa20.76■□□□□ 0.91
TNFAIP2-207ENST00000560562 NRXN1Q9ULB1 1477 aa20.75■□□□□ 0.91
TNFAIP2-207ENST00000560562 SHPRHQ149N8 1683 aa20.75■□□□□ 0.91
TNFAIP2-207ENST00000560562 MYOM2P54296 1465 aa20.73■□□□□ 0.91
TNFAIP2-207ENST00000560562 SOCS7O14512 581 aa20.72■□□□□ 0.91
TNFAIP2-207ENST00000560562 RGS17Q9UGC6 210 aaPredicted RBP20.72■□□□□ 0.91
TNFAIP2-207ENST00000560562 TECPR2O15040 1411 aa20.72■□□□□ 0.91
TNFAIP2-207ENST00000560562 PHF23Q9BUL5 403 aaPredicted RBP20.71■□□□□ 0.91
TNFAIP2-207ENST00000560562 LAMC1P11047 1609 aa20.71■□□□□ 0.91
TNFAIP2-207ENST00000560562 JCADQ9P266 1359 aa20.71■□□□□ 0.91
TNFAIP2-207ENST00000560562 LRP6O75581 1613 aa20.7■□□□□ 0.9
TNFAIP2-207ENST00000560562 C1orf167Q5SNV9 1468 aa20.7■□□□□ 0.9
TNFAIP2-207ENST00000560562 TMEM132EQ6IEE7 984 aa20.7■□□□□ 0.9
TNFAIP2-207ENST00000560562 CDC42BPGQ6DT37 1551 aa20.69■□□□□ 0.9
TNFAIP2-207ENST00000560562 HRCP23327 699 aa20.69■□□□□ 0.9
TNFAIP2-207ENST00000560562 LRPPRCP42704 1394 aaKnown RBP20.68■□□□□ 0.9
TNFAIP2-207ENST00000560562 DDX17Q92841 729 aaKnown RBP20.67■□□□□ 0.9
TNFAIP2-207ENST00000560562 STK26Q9P289 416 aa20.67■□□□□ 0.9
TNFAIP2-207ENST00000560562 PLEKHH1Q9ULM0 1364 aa20.67■□□□□ 0.9
TNFAIP2-207ENST00000560562 YTHDC2Q9H6S0 1430 aaKnown RBP20.66■□□□□ 0.9
TNFAIP2-207ENST00000560562 ABCC11Q96J66 1382 aa20.65■□□□□ 0.9
TNFAIP2-207ENST00000560562 WAPLQ7Z5K2 1190 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms