RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 TXNDC2Q86VQ3 553 aa15.73■□□□□ 0.11
SNRPA1-212ENST00000560496 TOM1O60784 492 aa15.72■□□□□ 0.11
SNRPA1-212ENST00000560496 HSPA1LP34931 641 aa15.72■□□□□ 0.11
SNRPA1-212ENST00000560496 PIP4K2BP78356 416 aa15.72■□□□□ 0.11
SNRPA1-212ENST00000560496 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
SNRPA1-212ENST00000560496 EID1Q9Y6B2 187 aa15.7■□□□□ 0.1
SNRPA1-212ENST00000560496 DIP2AQ14689 1571 aa15.7■□□□□ 0.1
SNRPA1-212ENST00000560496 ROBO1Q9Y6N7 1651 aa15.69■□□□□ 0.1
SNRPA1-212ENST00000560496 NRXN3Q9Y4C0 1643 aa15.68■□□□□ 0.1
SNRPA1-212ENST00000560496 RRBP1Q9P2E9 1410 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-212ENST00000560496 RIMS2Q9UQ26 1411 aa15.68■□□□□ 0.1
SNRPA1-212ENST00000560496 PLEKHG1Q9ULL1 1385 aa15.67■□□□□ 0.1
SNRPA1-212ENST00000560496 SLC52A1Q9NWF4 448 aa15.67■□□□□ 0.1
SNRPA1-212ENST00000560496 STAG3Q9UJ98 1225 aa15.67■□□□□ 0.1
SNRPA1-212ENST00000560496 CLTCL1P53675 1640 aa15.65■□□□□ 0.1
SNRPA1-212ENST00000560496 TMEM94Q12767 1356 aa15.64■□□□□ 0.09
SNRPA1-212ENST00000560496 TRPM2O94759 1503 aa15.63■□□□□ 0.09
SNRPA1-212ENST00000560496 XRN1Q8IZH2 1706 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-212ENST00000560496 ADAMTS13Q76LX8 1427 aa15.62■□□□□ 0.09
SNRPA1-212ENST00000560496 SOCS7O14512 581 aa15.62■□□□□ 0.09
SNRPA1-212ENST00000560496 SLC26A8Q96RN1 970 aa15.62■□□□□ 0.09
SNRPA1-212ENST00000560496 SETBP1Q9Y6X0 1596 aa15.61■□□□□ 0.09
SNRPA1-212ENST00000560496 NUP155O75694 1391 aa15.61■□□□□ 0.09
SNRPA1-212ENST00000560496 KCNA6P17658 529 aa15.6■□□□□ 0.09
SNRPA1-212ENST00000560496 PPARGC1BQ86YN6 1023 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-212ENST00000560496 FAM135BQ49AJ0 1406 aa15.6■□□□□ 0.09
SNRPA1-212ENST00000560496 NEXMIFQ5QGS0 1516 aa15.59■□□□□ 0.09
SNRPA1-212ENST00000560496 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-212ENST00000560496 KIF1BO60333 1816 aa15.59■□□□□ 0.09
SNRPA1-212ENST00000560496 NAIPQ13075 1403 aa15.59■□□□□ 0.09
SNRPA1-212ENST00000560496 SETD1AO15047 1707 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-212ENST00000560496 PHLPP1O60346 1717 aa15.58■□□□□ 0.08
SNRPA1-212ENST00000560496 ITGAEP38570 1179 aa15.58■□□□□ 0.08
SNRPA1-212ENST00000560496 COL16A1Q07092 1604 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-212ENST00000560496 HFM1A2PYH4 1435 aa15.54■□□□□ 0.08
SNRPA1-212ENST00000560496 PTPRUQ92729 1446 aa15.54■□□□□ 0.08
SNRPA1-212ENST00000560496 RBM33Q96EV2 1170 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-212ENST00000560496 NALCNQ8IZF0 1738 aa15.54■□□□□ 0.08
SNRPA1-212ENST00000560496 MSH6P52701 1360 aa15.53■□□□□ 0.08
SNRPA1-212ENST00000560496 PIK3R4Q99570 1358 aa15.53■□□□□ 0.08
SNRPA1-212ENST00000560496 PPP1R15AO75807 674 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-212ENST00000560496 NCOA3Q9Y6Q9 1424 aa15.52■□□□□ 0.08
SNRPA1-212ENST00000560496 PROSER2Q86WR7 435 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-212ENST00000560496 AHDC1Q5TGY3 1603 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-212ENST00000560496 PPLO60437 1756 aa15.52■□□□□ 0.07
SNRPA1-212ENST00000560496 CHGAP10645 457 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-212ENST00000560496 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNRPA1-212ENST00000560496 TBX22Q9Y458 520 aa15.51■□□□□ 0.07
SNRPA1-212ENST00000560496 NUTM2DQ5VT03 806 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-212ENST00000560496 SHPRHQ149N8 1683 aa15.5■□□□□ 0.07
SNRPA1-212ENST00000560496 BCANQ96GW7 911 aa15.49■□□□□ 0.07
SNRPA1-212ENST00000560496 IFT172Q9UG01 1749 aa15.48■□□□□ 0.07
SNRPA1-212ENST00000560496 NHSL1Q5SYE7 1610 aa15.48■□□□□ 0.07
SNRPA1-212ENST00000560496 HDGFP51858 240 aaKnown RBP15.47■□□□□ 0.07
SNRPA1-212ENST00000560496 DCCP43146 1447 aa15.46■□□□□ 0.07
SNRPA1-212ENST00000560496 ASXL1Q8IXJ9 1541 aa15.43■□□□□ 0.06
SNRPA1-212ENST00000560496 METP08581 1390 aa15.43■□□□□ 0.06
SNRPA1-212ENST00000560496 LRP6O75581 1613 aa15.43■□□□□ 0.06
SNRPA1-212ENST00000560496 PRAG1Q86YV5 1406 aa15.43■□□□□ 0.06
SNRPA1-212ENST00000560496 RGS17Q9UGC6 210 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-212ENST00000560496 SLAIN2Q9P270 581 aa15.41■□□□□ 0.06
SNRPA1-212ENST00000560496 MST1RQ04912 1400 aa15.41■□□□□ 0.06
SNRPA1-212ENST00000560496 PTCH1Q13635 1447 aa15.41■□□□□ 0.06
SNRPA1-212ENST00000560496 ADGRL3Q9HAR2 1447 aa15.41■□□□□ 0.06
SNRPA1-212ENST00000560496 LAMC1P11047 1609 aa15.4■□□□□ 0.06
SNRPA1-212ENST00000560496 JCADQ9P266 1359 aa15.39■□□□□ 0.05
SNRPA1-212ENST00000560496 ADRA2BP18089 450 aa15.39■□□□□ 0.05
SNRPA1-212ENST00000560496 AMOTL2Q9Y2J4 779 aa15.39■□□□□ 0.05
SNRPA1-212ENST00000560496 KNDC1Q76NI1 1749 aa15.39■□□□□ 0.05
SNRPA1-212ENST00000560496 ZNF326Q5BKZ1 582 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-212ENST00000560496 CADPS2Q86UW7 1296 aa15.36■□□□□ 0.05
SNRPA1-212ENST00000560496 C19orf44Q9H6X5 657 aa15.36■□□□□ 0.05
SNRPA1-212ENST00000560496 CDC42BPGQ6DT37 1551 aa15.34■□□□□ 0.05
SNRPA1-212ENST00000560496 C14orf37Q86TY3 774 aa15.34■□□□□ 0.05
SNRPA1-212ENST00000560496 BRINP3Q76B58 766 aa15.33■□□□□ 0.04
SNRPA1-212ENST00000560496 SPATA31E1Q6ZUB1 1445 aa15.33■□□□□ 0.04
SNRPA1-212ENST00000560496 ATF3P18847 181 aa15.32■□□□□ 0.04
SNRPA1-212ENST00000560496 TRIM52Q96A61 297 aa15.32■□□□□ 0.04
SNRPA1-212ENST00000560496 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
SNRPA1-212ENST00000560496 ROBO2Q9HCK4 1378 aa15.32■□□□□ 0.04
SNRPA1-212ENST00000560496 SETD5Q9C0A6 1442 aa15.32■□□□□ 0.04
SNRPA1-212ENST00000560496 POTEAQ6S8J7 498 aa15.31■□□□□ 0.04
SNRPA1-212ENST00000560496 CCDC144AA2RUR9 1427 aa15.31■□□□□ 0.04
SNRPA1-212ENST00000560496 SPATA31A6Q5VVP1 1343 aa15.3■□□□□ 0.04
SNRPA1-212ENST00000560496 C1orf167Q5SNV9 1468 aa15.29■□□□□ 0.04
SNRPA1-212ENST00000560496 RPGRIP1LQ68CZ1 1315 aa15.28■□□□□ 0.04
SNRPA1-212ENST00000560496 COL22A1Q8NFW1 1626 aaPredicted RBP15.28■□□□□ 0.04
SNRPA1-212ENST00000560496 TECPR2O15040 1411 aa15.27■□□□□ 0.04
SNRPA1-212ENST00000560496 PIK3C2GO75747 1445 aa15.27■□□□□ 0.04
SNRPA1-212ENST00000560496 FMN2Q9NZ56 1722 aa15.27■□□□□ 0.04
SNRPA1-212ENST00000560496 VGFO15240 615 aaPredicted RBP15.26■□□□□ 0.03
SNRPA1-212ENST00000560496 NRXN1Q9ULB1 1477 aa15.25■□□□□ 0.03
SNRPA1-212ENST00000560496 PNPLA6Q8IY17 1366 aa15.24■□□□□ 0.03
SNRPA1-212ENST00000560496 MYOM2P54296 1465 aa15.24■□□□□ 0.03
SNRPA1-212ENST00000560496 MARF1Q9Y4F3 1742 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-212ENST00000560496 ADGRF5Q8IZF2 1346 aa15.23■□□□□ 0.03
SNRPA1-212ENST00000560496 MPHOSPH9Q99550 1183 aa15.22■□□□□ 0.03
SNRPA1-212ENST00000560496 ANKRD30BQ9BXX2 1392 aa15.22■□□□□ 0.03
SNRPA1-212ENST00000560496 KIF1AQ12756 1690 aa15.22■□□□□ 0.03
SNRPA1-212ENST00000560496 DDX17Q92841 729 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms