RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 NWD1Q149M9 1564 aa23.01■■□□□ 1.27
SNRPA1-210ENST00000560383 NAIPQ13075 1403 aa22.99■■□□□ 1.27
SNRPA1-210ENST00000560383 HSPA1LP34931 641 aa22.99■■□□□ 1.27
SNRPA1-210ENST00000560383 NKTRP30414 1462 aaKnown RBP22.98■■□□□ 1.27
SNRPA1-210ENST00000560383 NUP155O75694 1391 aa22.97■■□□□ 1.27
SNRPA1-210ENST00000560383 HFM1A2PYH4 1435 aa22.96■■□□□ 1.27
SNRPA1-210ENST00000560383 ILDR2Q71H61 639 aa22.95■■□□□ 1.26
SNRPA1-210ENST00000560383 PLEKHG1Q9ULL1 1385 aa22.95■■□□□ 1.26
SNRPA1-210ENST00000560383 MED1Q15648 1581 aaPredicted RBP22.94■■□□□ 1.26
SNRPA1-210ENST00000560383 RIMS2Q9UQ26 1411 aa22.94■■□□□ 1.26
SNRPA1-210ENST00000560383 KCNA6P17658 529 aa22.93■■□□□ 1.26
SNRPA1-210ENST00000560383 HDGFP51858 240 aaKnown RBP22.92■■□□□ 1.26
SNRPA1-210ENST00000560383 SLC26A8Q96RN1 970 aa22.91■■□□□ 1.26
SNRPA1-210ENST00000560383 DIP2AQ14689 1571 aa22.91■■□□□ 1.26
SNRPA1-210ENST00000560383 CHD2O14647 1828 aaKnown RBP22.91■■□□□ 1.26
SNRPA1-210ENST00000560383 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
SNRPA1-210ENST00000560383 TMEM94Q12767 1356 aa22.89■■□□□ 1.26
SNRPA1-210ENST00000560383 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.88■■□□□ 1.25
SNRPA1-210ENST00000560383 SOCS7O14512 581 aa22.86■■□□□ 1.25
SNRPA1-210ENST00000560383 PPP1R15AO75807 674 aaPredicted RBP22.86■■□□□ 1.25
SNRPA1-210ENST00000560383 FAM135BQ49AJ0 1406 aa22.85■■□□□ 1.25
SNRPA1-210ENST00000560383 PROSER2Q86WR7 435 aaPredicted RBP22.82■■□□□ 1.24
SNRPA1-210ENST00000560383 BCANQ96GW7 911 aa22.82■■□□□ 1.24
SNRPA1-210ENST00000560383 TBX22Q9Y458 520 aa22.82■■□□□ 1.24
SNRPA1-210ENST00000560383 ADAMTS13Q76LX8 1427 aa22.82■■□□□ 1.24
SNRPA1-210ENST00000560383 PIK3R4Q99570 1358 aa22.81■■□□□ 1.24
SNRPA1-210ENST00000560383 ROBO1Q9Y6N7 1651 aa22.81■■□□□ 1.24
SNRPA1-210ENST00000560383 CHGAP10645 457 aaKnown RBP22.8■■□□□ 1.24
SNRPA1-210ENST00000560383 TRPM2O94759 1503 aa22.8■■□□□ 1.24
SNRPA1-210ENST00000560383 NCOA3Q9Y6Q9 1424 aa22.8■■□□□ 1.24
SNRPA1-210ENST00000560383 MSH6P52701 1360 aa22.78■■□□□ 1.24
SNRPA1-210ENST00000560383 SETBP1Q9Y6X0 1596 aa22.77■■□□□ 1.24
SNRPA1-210ENST00000560383 CLTCL1P53675 1640 aa22.76■■□□□ 1.23
SNRPA1-210ENST00000560383 NRXN3Q9Y4C0 1643 aa22.75■■□□□ 1.23
SNRPA1-210ENST00000560383 TRIM52Q96A61 297 aa22.74■■□□□ 1.23
SNRPA1-210ENST00000560383 KIF1BO60333 1816 aa22.73■■□□□ 1.23
SNRPA1-210ENST00000560383 RBM33Q96EV2 1170 aaKnown RBP22.72■■□□□ 1.23
SNRPA1-210ENST00000560383 XRN1Q8IZH2 1706 aaKnown RBP22.71■■□□□ 1.23
SNRPA1-210ENST00000560383 NEXMIFQ5QGS0 1516 aa22.71■■□□□ 1.23
SNRPA1-210ENST00000560383 NUTM2DQ5VT03 806 aaPredicted RBP22.7■■□□□ 1.22
SNRPA1-210ENST00000560383 SLC4A1APQ9BWU0 796 aaKnown RBP22.7■■□□□ 1.22
SNRPA1-210ENST00000560383 ACIN1Q9UKV3 1341 aaKnown RBP22.7■■□□□ 1.22
SNRPA1-210ENST00000560383 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.68■■□□□ 1.22
SNRPA1-210ENST00000560383 SETD5Q9C0A6 1442 aa22.68■■□□□ 1.22
SNRPA1-210ENST00000560383 PHLPP1O60346 1717 aa22.67■■□□□ 1.22
SNRPA1-210ENST00000560383 PTPRUQ92729 1446 aa22.66■■□□□ 1.22
SNRPA1-210ENST00000560383 SLAIN2Q9P270 581 aa22.66■■□□□ 1.22
SNRPA1-210ENST00000560383 DCCP43146 1447 aa22.65■■□□□ 1.22
SNRPA1-210ENST00000560383 ZNF326Q5BKZ1 582 aaKnown RBP22.63■■□□□ 1.21
SNRPA1-210ENST00000560383 MPHOSPH9Q99550 1183 aa22.62■■□□□ 1.21
SNRPA1-210ENST00000560383 C19orf44Q9H6X5 657 aa22.62■■□□□ 1.21
SNRPA1-210ENST00000560383 AMOTL2Q9Y2J4 779 aa22.62■■□□□ 1.21
SNRPA1-210ENST00000560383 COL16A1Q07092 1604 aaPredicted RBP22.61■■□□□ 1.21
SNRPA1-210ENST00000560383 CADPS2Q86UW7 1296 aa22.61■■□□□ 1.21
SNRPA1-210ENST00000560383 RAB3GAP2Q9H2M9 1393 aa22.6■■□□□ 1.21
SNRPA1-210ENST00000560383 AHDC1Q5TGY3 1603 aaPredicted RBP22.6■■□□□ 1.21
SNRPA1-210ENST00000560383 C14orf37Q86TY3 774 aa22.59■■□□□ 1.21
SNRPA1-210ENST00000560383 SETD1AO15047 1707 aaKnown RBP22.59■■□□□ 1.21
SNRPA1-210ENST00000560383 METP08581 1390 aa22.58■■□□□ 1.21
SNRPA1-210ENST00000560383 PPLO60437 1756 aa22.57■■□□□ 1.2
SNRPA1-210ENST00000560383 JCADQ9P266 1359 aa22.56■■□□□ 1.2
SNRPA1-210ENST00000560383 ATF3P18847 181 aa22.56■■□□□ 1.2
SNRPA1-210ENST00000560383 HRCP23327 699 aa22.56■■□□□ 1.2
SNRPA1-210ENST00000560383 FOXD1Q16676 465 aa22.56■■□□□ 1.2
SNRPA1-210ENST00000560383 PRAG1Q86YV5 1406 aa22.55■■□□□ 1.2
SNRPA1-210ENST00000560383 RPGRIP1LQ68CZ1 1315 aa22.54■■□□□ 1.2
SNRPA1-210ENST00000560383 NALCNQ8IZF0 1738 aa22.53■■□□□ 1.2
SNRPA1-210ENST00000560383 SHPRHQ149N8 1683 aa22.52■■□□□ 1.2
SNRPA1-210ENST00000560383 PTCH1Q13635 1447 aa22.52■■□□□ 1.2
SNRPA1-210ENST00000560383 ADGRL3Q9HAR2 1447 aa22.52■■□□□ 1.2
SNRPA1-210ENST00000560383 VGFO15240 615 aaPredicted RBP22.52■■□□□ 1.2
SNRPA1-210ENST00000560383 RGS17Q9UGC6 210 aaPredicted RBP22.51■■□□□ 1.19
SNRPA1-210ENST00000560383 CCDC144AA2RUR9 1427 aa22.49■■□□□ 1.19
SNRPA1-210ENST00000560383 MST1RQ04912 1400 aa22.49■■□□□ 1.19
SNRPA1-210ENST00000560383 ASXL1Q8IXJ9 1541 aa22.49■■□□□ 1.19
SNRPA1-210ENST00000560383 NHSL1Q5SYE7 1610 aa22.49■■□□□ 1.19
SNRPA1-210ENST00000560383 BRINP3Q76B58 766 aa22.47■■□□□ 1.19
SNRPA1-210ENST00000560383 IFT172Q9UG01 1749 aa22.47■■□□□ 1.19
SNRPA1-210ENST00000560383 SPATA31E1Q6ZUB1 1445 aa22.47■■□□□ 1.19
SNRPA1-210ENST00000560383 SPATA31A6Q5VVP1 1343 aa22.46■■□□□ 1.19
SNRPA1-210ENST00000560383 LRP6O75581 1613 aa22.42■■□□□ 1.18
SNRPA1-210ENST00000560383 LAMC1P11047 1609 aa22.41■■□□□ 1.18
SNRPA1-210ENST00000560383 ANKRD30BQ9BXX2 1392 aa22.39■■□□□ 1.18
SNRPA1-210ENST00000560383 ROBO2Q9HCK4 1378 aa22.39■■□□□ 1.18
SNRPA1-210ENST00000560383 POTEAQ6S8J7 498 aa22.38■■□□□ 1.17
SNRPA1-210ENST00000560383 C1orf167Q5SNV9 1468 aa22.36■■□□□ 1.17
SNRPA1-210ENST00000560383 RGL3Q3MIN7 710 aa22.36■■□□□ 1.17
SNRPA1-210ENST00000560383 CDC42BPGQ6DT37 1551 aa22.36■■□□□ 1.17
SNRPA1-210ENST00000560383 KNDC1Q76NI1 1749 aa22.36■■□□□ 1.17
SNRPA1-210ENST00000560383 TECPR2O15040 1411 aa22.34■■□□□ 1.17
SNRPA1-210ENST00000560383 PIK3C2GO75747 1445 aa22.34■■□□□ 1.17
SNRPA1-210ENST00000560383 ADGRF5Q8IZF2 1346 aa22.32■■□□□ 1.16
SNRPA1-210ENST00000560383 LRRC59Q96AG4 307 aaKnown RBP22.31■■□□□ 1.16
SNRPA1-210ENST00000560383 MEX3CQ5U5Q3 659 aaKnown RBP22.3■■□□□ 1.16
SNRPA1-210ENST00000560383 MYOM2P54296 1465 aa22.28■■□□□ 1.16
SNRPA1-210ENST00000560383 LRPPRCP42704 1394 aaKnown RBP22.28■■□□□ 1.16
SNRPA1-210ENST00000560383 ZNF772Q68DY9 489 aaPredicted RBP22.28■■□□□ 1.16
SNRPA1-210ENST00000560383 NRXN1Q9ULB1 1477 aa22.28■■□□□ 1.16
SNRPA1-210ENST00000560383 PNPLA6Q8IY17 1366 aa22.27■■□□□ 1.16
SNRPA1-210ENST00000560383 ABCC11Q96J66 1382 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms