RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 ZFYVE9O95405 1425 aa26.75■■□□□ 1.87
CRTC3-208ENST00000560098 GCC2Q8IWJ2 1684 aa26.75■■□□□ 1.87
CRTC3-208ENST00000560098 HDGFP51858 240 aaKnown RBP26.73■■□□□ 1.87
CRTC3-208ENST00000560098 FAM135BQ49AJ0 1406 aa26.72■■□□□ 1.87
CRTC3-208ENST00000560098 RIMS2Q9UQ26 1411 aa26.72■■□□□ 1.87
CRTC3-208ENST00000560098 NKTRP30414 1462 aaKnown RBP26.72■■□□□ 1.87
CRTC3-208ENST00000560098 PLEKHG1Q9ULL1 1385 aa26.72■■□□□ 1.87
CRTC3-208ENST00000560098 NWD1Q149M9 1564 aa26.71■■□□□ 1.87
CRTC3-208ENST00000560098 TMEM131LA2VDJ0 1609 aa26.71■■□□□ 1.87
CRTC3-208ENST00000560098 PPP1R15AO75807 674 aaPredicted RBP26.71■■□□□ 1.87
CRTC3-208ENST00000560098 RBM33Q96EV2 1170 aaKnown RBP26.71■■□□□ 1.87
CRTC3-208ENST00000560098 MYO5BQ9ULV0 1848 aa26.68■■□□□ 1.86
CRTC3-208ENST00000560098 E9PCH4 1651 aa26.68■■□□□ 1.86
CRTC3-208ENST00000560098 IQGAP3Q86VI3 1631 aa26.68■■□□□ 1.86
CRTC3-208ENST00000560098 CHGAP10645 457 aaKnown RBP26.67■■□□□ 1.86
CRTC3-208ENST00000560098 ITGAEP38570 1179 aa26.67■■□□□ 1.86
CRTC3-208ENST00000560098 NUP155O75694 1391 aa26.66■■□□□ 1.86
CRTC3-208ENST00000560098 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.65■■□□□ 1.86
CRTC3-208ENST00000560098 PPARGC1BQ86YN6 1023 aaKnown RBP26.64■■□□□ 1.85
CRTC3-208ENST00000560098 MSH6P52701 1360 aa26.63■■□□□ 1.85
CRTC3-208ENST00000560098 TBX22Q9Y458 520 aa26.63■■□□□ 1.85
CRTC3-208ENST00000560098 ROBO1Q9Y6N7 1651 aa26.6■■□□□ 1.85
CRTC3-208ENST00000560098 CHD2O14647 1828 aaKnown RBP26.6■■□□□ 1.85
CRTC3-208ENST00000560098 NUTM2DQ5VT03 806 aaPredicted RBP26.59■■□□□ 1.85
CRTC3-208ENST00000560098 ADAMTS13Q76LX8 1427 aa26.57■■□□□ 1.84
CRTC3-208ENST00000560098 SLAIN2Q9P270 581 aa26.56■■□□□ 1.84
CRTC3-208ENST00000560098 DIP2AQ14689 1571 aa26.54■■□□□ 1.84
CRTC3-208ENST00000560098 RGS17Q9UGC6 210 aaPredicted RBP26.54■■□□□ 1.84
CRTC3-208ENST00000560098 PIK3R4Q99570 1358 aa26.53■■□□□ 1.84
CRTC3-208ENST00000560098 NCOA3Q9Y6Q9 1424 aa26.53■■□□□ 1.84
CRTC3-208ENST00000560098 C14orf37Q86TY3 774 aa26.49■■□□□ 1.83
CRTC3-208ENST00000560098 TRPM2O94759 1503 aa26.47■■□□□ 1.83
CRTC3-208ENST00000560098 C19orf44Q9H6X5 657 aa26.45■■□□□ 1.82
CRTC3-208ENST00000560098 SPHKAPQ2M3C7 1700 aa26.45■■□□□ 1.82
CRTC3-208ENST00000560098 RRBP1Q9P2E9 1410 aaKnown RBP26.44■■□□□ 1.82
CRTC3-208ENST00000560098 PHLPP1O60346 1717 aa26.44■■□□□ 1.82
CRTC3-208ENST00000560098 AMOTL2Q9Y2J4 779 aa26.44■■□□□ 1.82
CRTC3-208ENST00000560098 CADPS2Q86UW7 1296 aa26.43■■□□□ 1.82
CRTC3-208ENST00000560098 PTPRUQ92729 1446 aa26.43■■□□□ 1.82
CRTC3-208ENST00000560098 ZNF326Q5BKZ1 582 aaKnown RBP26.42■■□□□ 1.82
CRTC3-208ENST00000560098 JCADQ9P266 1359 aa26.42■■□□□ 1.82
CRTC3-208ENST00000560098 ATF3P18847 181 aa26.41■■□□□ 1.82
CRTC3-208ENST00000560098 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.4■■□□□ 1.82
CRTC3-208ENST00000560098 NAIPQ13075 1403 aa26.39■■□□□ 1.82
CRTC3-208ENST00000560098 SETBP1Q9Y6X0 1596 aa26.39■■□□□ 1.82
CRTC3-208ENST00000560098 POTEAQ6S8J7 498 aa26.38■■□□□ 1.81
CRTC3-208ENST00000560098 NRXN3Q9Y4C0 1643 aa26.38■■□□□ 1.81
CRTC3-208ENST00000560098 COL16A1Q07092 1604 aaPredicted RBP26.37■■□□□ 1.81
CRTC3-208ENST00000560098 CLTCL1P53675 1640 aa26.34■■□□□ 1.81
CRTC3-208ENST00000560098 XRN1Q8IZH2 1706 aaKnown RBP26.33■■□□□ 1.81
CRTC3-208ENST00000560098 METP08581 1390 aa26.33■■□□□ 1.8
CRTC3-208ENST00000560098 DCCP43146 1447 aa26.32■■□□□ 1.8
CRTC3-208ENST00000560098 AHDC1Q5TGY3 1603 aaPredicted RBP26.32■■□□□ 1.8
CRTC3-208ENST00000560098 NEXMIFQ5QGS0 1516 aa26.31■■□□□ 1.8
CRTC3-208ENST00000560098 BRINP3Q76B58 766 aa26.3■■□□□ 1.8
CRTC3-208ENST00000560098 SPATA31A6Q5VVP1 1343 aa26.29■■□□□ 1.8
CRTC3-208ENST00000560098 TRIM52Q96A61 297 aa26.28■■□□□ 1.8
CRTC3-208ENST00000560098 HFM1A2PYH4 1435 aa26.27■■□□□ 1.8
CRTC3-208ENST00000560098 LRP6O75581 1613 aa26.25■■□□□ 1.79
CRTC3-208ENST00000560098 KIF1BO60333 1816 aa26.24■■□□□ 1.79
CRTC3-208ENST00000560098 MST1RQ04912 1400 aa26.23■■□□□ 1.79
CRTC3-208ENST00000560098 MEX3CQ5U5Q3 659 aaKnown RBP26.22■■□□□ 1.79
CRTC3-208ENST00000560098 SLC4A1APQ9BWU0 796 aaKnown RBP26.22■■□□□ 1.79
CRTC3-208ENST00000560098 SHPRHQ149N8 1683 aa26.22■■□□□ 1.79
CRTC3-208ENST00000560098 ASXL1Q8IXJ9 1541 aa26.22■■□□□ 1.79
CRTC3-208ENST00000560098 ADGRL3Q9HAR2 1447 aa26.21■■□□□ 1.79
CRTC3-208ENST00000560098 VGFO15240 615 aaPredicted RBP26.21■■□□□ 1.79
CRTC3-208ENST00000560098 RPGRIP1LQ68CZ1 1315 aa26.17■■□□□ 1.78
CRTC3-208ENST00000560098 ZNF772Q68DY9 489 aaPredicted RBP26.16■■□□□ 1.78
CRTC3-208ENST00000560098 SETD5Q9C0A6 1442 aa26.15■■□□□ 1.78
CRTC3-208ENST00000560098 PTCH1Q13635 1447 aa26.14■■□□□ 1.77
CRTC3-208ENST00000560098 NHSL1Q5SYE7 1610 aa26.14■■□□□ 1.77
CRTC3-208ENST00000560098 NALCNQ8IZF0 1738 aa26.14■■□□□ 1.77
CRTC3-208ENST00000560098 NUTM2BA6NNL0 878 aaPredicted RBP26.12■■□□□ 1.77
CRTC3-208ENST00000560098 NUTM2EB1AL46 878 aaPredicted RBP26.12■■□□□ 1.77
CRTC3-208ENST00000560098 NUTM2AQ8IVF1 878 aaPredicted RBP26.12■■□□□ 1.77
CRTC3-208ENST00000560098 LRRC59Q96AG4 307 aaKnown RBP26.12■■□□□ 1.77
CRTC3-208ENST00000560098 ROBO2Q9HCK4 1378 aa26.11■■□□□ 1.77
CRTC3-208ENST00000560098 SETD1AO15047 1707 aaKnown RBP26.11■■□□□ 1.77
CRTC3-208ENST00000560098 FOXD1Q16676 465 aa26.09■■□□□ 1.77
CRTC3-208ENST00000560098 DDX17Q92841 729 aaKnown RBP26.09■■□□□ 1.77
CRTC3-208ENST00000560098 PRAG1Q86YV5 1406 aa26.08■■□□□ 1.77
CRTC3-208ENST00000560098 C1orf167Q5SNV9 1468 aa26.08■■□□□ 1.77
CRTC3-208ENST00000560098 PPLO60437 1756 aa26.07■■□□□ 1.76
CRTC3-208ENST00000560098 PNPLA6Q8IY17 1366 aa26.03■■□□□ 1.76
CRTC3-208ENST00000560098 CCDC144AA2RUR9 1427 aa26.03■■□□□ 1.76
CRTC3-208ENST00000560098 RXRBP28702 533 aa26.02■■□□□ 1.76
CRTC3-208ENST00000560098 AFF2P51816 1311 aa26.01■■□□□ 1.75
CRTC3-208ENST00000560098 ORAI2Q96SN7 254 aa26.01■■□□□ 1.75
CRTC3-208ENST00000560098 MPHOSPH9Q99550 1183 aa26■■□□□ 1.75
CRTC3-208ENST00000560098 ADGRF5Q8IZF2 1346 aa25.99■■□□□ 1.75
CRTC3-208ENST00000560098 RGL3Q3MIN7 710 aa25.98■■□□□ 1.75
CRTC3-208ENST00000560098 LAMC1P11047 1609 aa25.98■■□□□ 1.75
CRTC3-208ENST00000560098 SPATA31E1Q6ZUB1 1445 aa25.98■■□□□ 1.75
CRTC3-208ENST00000560098 SOS2Q07890 1332 aaPredicted RBP25.98■■□□□ 1.75
CRTC3-208ENST00000560098 C8orf37Q96NL8 207 aa25.97■■□□□ 1.75
CRTC3-208ENST00000560098 ANKRD30BQ9BXX2 1392 aa25.95■■□□□ 1.75
CRTC3-208ENST00000560098 CDK12Q9NYV4 1490 aaPredicted RBP25.94■■□□□ 1.74
CRTC3-208ENST00000560098 UPF1Q92900 1129 aaKnown RBP eCLIP25.93■■□□□ 1.74
CRTC3-208ENST00000560098 CDC42BPGQ6DT37 1551 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms