RNA–Protein interactions for RNA: ENST00000560008.5

MIR9-3HG-208, Transcript of MIR9-3 host gene, humanhuman

TSL 4

Gene MIR9-3HG, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-208ENST00000560008 TRIM52Q96A61 297 aa26.09■■□□□ 1.77
MIR9-3HG-208ENST00000560008 PLEKHG1Q9ULL1 1385 aa26.07■■□□□ 1.76
MIR9-3HG-208ENST00000560008 ZFYVE9O95405 1425 aa26.06■■□□□ 1.76
MIR9-3HG-208ENST00000560008 STRCP1A6NGW2 1772 aa26.06■■□□□ 1.76
MIR9-3HG-208ENST00000560008 ACIN1Q9UKV3 1341 aaKnown RBP26.06■■□□□ 1.76
MIR9-3HG-208ENST00000560008 LRRC7Q96NW7 1537 aa26.05■■□□□ 1.76
MIR9-3HG-208ENST00000560008 SCAF1Q9H7N4 1312 aaKnown RBP26.04■■□□□ 1.76
MIR9-3HG-208ENST00000560008 KCNA6P17658 529 aa26.02■■□□□ 1.76
MIR9-3HG-208ENST00000560008 SLC26A8Q96RN1 970 aa26.02■■□□□ 1.76
MIR9-3HG-208ENST00000560008 SLC4A1APQ9BWU0 796 aaKnown RBP25.99■■□□□ 1.75
MIR9-3HG-208ENST00000560008 TRPM2O94759 1503 aa25.98■■□□□ 1.75
MIR9-3HG-208ENST00000560008 PIP4K2BP78356 416 aa25.98■■□□□ 1.75
MIR9-3HG-208ENST00000560008 DIP2AQ14689 1571 aa25.98■■□□□ 1.75
MIR9-3HG-208ENST00000560008 NKTRP30414 1462 aaKnown RBP25.98■■□□□ 1.75
MIR9-3HG-208ENST00000560008 ZNF326Q5BKZ1 582 aaKnown RBP25.96■■□□□ 1.75
MIR9-3HG-208ENST00000560008 TBX22Q9Y458 520 aa25.96■■□□□ 1.75
MIR9-3HG-208ENST00000560008 KIF1BO60333 1816 aa25.95■■□□□ 1.74
MIR9-3HG-208ENST00000560008 NWD1Q149M9 1564 aa25.95■■□□□ 1.74
MIR9-3HG-208ENST00000560008 PROSER2Q86WR7 435 aaPredicted RBP25.93■■□□□ 1.74
MIR9-3HG-208ENST00000560008 CLTCL1P53675 1640 aa25.92■■□□□ 1.74
MIR9-3HG-208ENST00000560008 PIK3R4Q99570 1358 aa25.91■■□□□ 1.74
MIR9-3HG-208ENST00000560008 CHD2O14647 1828 aaKnown RBP25.89■■□□□ 1.74
MIR9-3HG-208ENST00000560008 NUTM2DQ5VT03 806 aaPredicted RBP25.89■■□□□ 1.74
MIR9-3HG-208ENST00000560008 TMEM94Q12767 1356 aa25.89■■□□□ 1.74
MIR9-3HG-208ENST00000560008 XIRP1Q702N8 1843 aaKnown RBP25.88■■□□□ 1.73
MIR9-3HG-208ENST00000560008 SENP3Q9H4L4 574 aaPredicted RBP25.87■■□□□ 1.73
MIR9-3HG-208ENST00000560008 ADAMTS13Q76LX8 1427 aa25.85■■□□□ 1.73
MIR9-3HG-208ENST00000560008 SETD5Q9C0A6 1442 aa25.85■■□□□ 1.73
MIR9-3HG-208ENST00000560008 MSH6P52701 1360 aa25.84■■□□□ 1.73
MIR9-3HG-208ENST00000560008 SETBP1Q9Y6X0 1596 aa25.83■■□□□ 1.73
MIR9-3HG-208ENST00000560008 NCOA3Q9Y6Q9 1424 aa25.83■■□□□ 1.73
MIR9-3HG-208ENST00000560008 ALKQ9UM73 1620 aa25.83■■□□□ 1.73
MIR9-3HG-208ENST00000560008 HSPA1LP34931 641 aa25.82■■□□□ 1.72
MIR9-3HG-208ENST00000560008 RPGRIP1LQ68CZ1 1315 aa25.82■■□□□ 1.72
MIR9-3HG-208ENST00000560008 MPHOSPH9Q99550 1183 aa25.81■■□□□ 1.72
MIR9-3HG-208ENST00000560008 NEXMIFQ5QGS0 1516 aa25.81■■□□□ 1.72
MIR9-3HG-208ENST00000560008 DISP3Q9P2K9 1392 aa25.81■■□□□ 1.72
MIR9-3HG-208ENST00000560008 VGFO15240 615 aaPredicted RBP25.8■■□□□ 1.72
MIR9-3HG-208ENST00000560008 CCDC144AA2RUR9 1427 aa25.8■■□□□ 1.72
MIR9-3HG-208ENST00000560008 C14orf37Q86TY3 774 aa25.77■■□□□ 1.72
MIR9-3HG-208ENST00000560008 FAM135BQ49AJ0 1406 aa25.75■■□□□ 1.71
MIR9-3HG-208ENST00000560008 AMOTL2Q9Y2J4 779 aa25.75■■□□□ 1.71
MIR9-3HG-208ENST00000560008 NRXN3Q9Y4C0 1643 aa25.74■■□□□ 1.71
MIR9-3HG-208ENST00000560008 RBM33Q96EV2 1170 aaKnown RBP25.73■■□□□ 1.71
MIR9-3HG-208ENST00000560008 FOXD1Q16676 465 aa25.72■■□□□ 1.71
MIR9-3HG-208ENST00000560008 RAB3GAP2Q9H2M9 1393 aa25.71■■□□□ 1.71
MIR9-3HG-208ENST00000560008 CADPS2Q86UW7 1296 aa25.69■■□□□ 1.7
MIR9-3HG-208ENST00000560008 PPLO60437 1756 aa25.69■■□□□ 1.7
MIR9-3HG-208ENST00000560008 ATF3P18847 181 aa25.68■■□□□ 1.7
MIR9-3HG-208ENST00000560008 C19orf44Q9H6X5 657 aa25.68■■□□□ 1.7
MIR9-3HG-208ENST00000560008 XRN1Q8IZH2 1706 aaKnown RBP25.68■■□□□ 1.7
MIR9-3HG-208ENST00000560008 PTPRUQ92729 1446 aa25.67■■□□□ 1.7
MIR9-3HG-208ENST00000560008 SLAIN2Q9P270 581 aa25.66■■□□□ 1.7
MIR9-3HG-208ENST00000560008 ROBO1Q9Y6N7 1651 aa25.66■■□□□ 1.7
MIR9-3HG-208ENST00000560008 METP08581 1390 aa25.65■■□□□ 1.7
MIR9-3HG-208ENST00000560008 ANKRD30BQ9BXX2 1392 aa25.65■■□□□ 1.7
MIR9-3HG-208ENST00000560008 HRCP23327 699 aa25.64■■□□□ 1.7
MIR9-3HG-208ENST00000560008 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.63■■□□□ 1.69
MIR9-3HG-208ENST00000560008 DCCP43146 1447 aa25.63■■□□□ 1.69
MIR9-3HG-208ENST00000560008 RGL3Q3MIN7 710 aa25.61■■□□□ 1.69
MIR9-3HG-208ENST00000560008 MED1Q15648 1581 aaPredicted RBP25.61■■□□□ 1.69
MIR9-3HG-208ENST00000560008 SPATA31E1Q6ZUB1 1445 aa25.6■■□□□ 1.69
MIR9-3HG-208ENST00000560008 PTCH1Q13635 1447 aa25.57■■□□□ 1.68
MIR9-3HG-208ENST00000560008 SETD1AO15047 1707 aaKnown RBP25.57■■□□□ 1.68
MIR9-3HG-208ENST00000560008 IFT172Q9UG01 1749 aa25.56■■□□□ 1.68
MIR9-3HG-208ENST00000560008 PHF23Q9BUL5 403 aaPredicted RBP25.55■■□□□ 1.68
MIR9-3HG-208ENST00000560008 PHLPP1O60346 1717 aa25.54■■□□□ 1.68
MIR9-3HG-208ENST00000560008 ADGRL3Q9HAR2 1447 aa25.54■■□□□ 1.68
MIR9-3HG-208ENST00000560008 PRAG1Q86YV5 1406 aa25.53■■□□□ 1.68
MIR9-3HG-208ENST00000560008 ADGRF5Q8IZF2 1346 aa25.51■■□□□ 1.67
MIR9-3HG-208ENST00000560008 PIK3C2GO75747 1445 aa25.47■■□□□ 1.67
MIR9-3HG-208ENST00000560008 MYOM2P54296 1465 aa25.47■■□□□ 1.67
MIR9-3HG-208ENST00000560008 NALCNQ8IZF0 1738 aa25.46■■□□□ 1.67
MIR9-3HG-208ENST00000560008 JCADQ9P266 1359 aa25.46■■□□□ 1.67
MIR9-3HG-208ENST00000560008 LAMC1P11047 1609 aa25.45■■□□□ 1.67
MIR9-3HG-208ENST00000560008 AHDC1Q5TGY3 1603 aaPredicted RBP25.45■■□□□ 1.67
MIR9-3HG-208ENST00000560008 ROBO2Q9HCK4 1378 aa25.44■■□□□ 1.66
MIR9-3HG-208ENST00000560008 MST1RQ04912 1400 aa25.44■■□□□ 1.66
MIR9-3HG-208ENST00000560008 ILDR2Q71H61 639 aa25.43■■□□□ 1.66
MIR9-3HG-208ENST00000560008 STAC3Q96MF2 364 aa25.43■■□□□ 1.66
MIR9-3HG-208ENST00000560008 BRINP3Q76B58 766 aa25.42■■□□□ 1.66
MIR9-3HG-208ENST00000560008 LRPPRCP42704 1394 aaKnown RBP25.42■■□□□ 1.66
MIR9-3HG-208ENST00000560008 COL16A1Q07092 1604 aaPredicted RBP25.41■■□□□ 1.66
MIR9-3HG-208ENST00000560008 ASXL1Q8IXJ9 1541 aa25.41■■□□□ 1.66
MIR9-3HG-208ENST00000560008 KNDC1Q76NI1 1749 aa25.4■■□□□ 1.66
MIR9-3HG-208ENST00000560008 TECPR2O15040 1411 aa25.4■■□□□ 1.66
MIR9-3HG-208ENST00000560008 ABCC11Q96J66 1382 aa25.39■■□□□ 1.65
MIR9-3HG-208ENST00000560008 NRXN1Q9ULB1 1477 aa25.39■■□□□ 1.65
MIR9-3HG-208ENST00000560008 STK26Q9P289 416 aa25.38■■□□□ 1.65
MIR9-3HG-208ENST00000560008 DHX57Q6P158 1386 aaKnown RBP25.38■■□□□ 1.65
MIR9-3HG-208ENST00000560008 C14orf93Q9H972 538 aaKnown RBP25.37■■□□□ 1.65
MIR9-3HG-208ENST00000560008 SPATA31A6Q5VVP1 1343 aa25.37■■□□□ 1.65
MIR9-3HG-208ENST00000560008 YTHDC2Q9H6S0 1430 aaKnown RBP25.36■■□□□ 1.65
MIR9-3HG-208ENST00000560008 C1orf167Q5SNV9 1468 aa25.35■■□□□ 1.65
MIR9-3HG-208ENST00000560008 SOCS7O14512 581 aa25.35■■□□□ 1.65
MIR9-3HG-208ENST00000560008 TMEM132EQ6IEE7 984 aa25.34■■□□□ 1.65
MIR9-3HG-208ENST00000560008 CDC42BPGQ6DT37 1551 aa25.34■■□□□ 1.65
MIR9-3HG-208ENST00000560008 NHSL1Q5SYE7 1610 aa25.34■■□□□ 1.65
MIR9-3HG-208ENST00000560008 SIRT1Q96EB6 747 aa25.33■■□□□ 1.65
MIR9-3HG-208ENST00000560008 SHPRHQ149N8 1683 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms