RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 SLC52A1Q9NWF4 448 aa29.05■■■□□ 2.24
CDC42BPB-206ENST00000559790 STAG3Q9UJ98 1225 aa29.02■■■□□ 2.24
CDC42BPB-206ENST00000559790 RIMS2Q9UQ26 1411 aa29.02■■■□□ 2.24
CDC42BPB-206ENST00000559790 ROBO1Q9Y6N7 1651 aa29■■■□□ 2.23
CDC42BPB-206ENST00000559790 SOCS7O14512 581 aa29■■■□□ 2.23
CDC42BPB-206ENST00000559790 TMEM94Q12767 1356 aa29■■■□□ 2.23
CDC42BPB-206ENST00000559790 PLEKHG1Q9ULL1 1385 aa29■■■□□ 2.23
CDC42BPB-206ENST00000559790 NRXN3Q9Y4C0 1643 aa28.99■■■□□ 2.23
CDC42BPB-206ENST00000559790 PPARGC1BQ86YN6 1023 aaKnown RBP28.99■■■□□ 2.23
CDC42BPB-206ENST00000559790 SLC26A8Q96RN1 970 aa28.99■■■□□ 2.23
CDC42BPB-206ENST00000559790 RRBP1Q9P2E9 1410 aaKnown RBP28.98■■■□□ 2.23
CDC42BPB-206ENST00000559790 ADAMTS13Q76LX8 1427 aa28.95■■■□□ 2.23
CDC42BPB-206ENST00000559790 KCNA6P17658 529 aa28.95■■■□□ 2.22
CDC42BPB-206ENST00000559790 DIP2AQ14689 1571 aa28.95■■■□□ 2.22
CDC42BPB-206ENST00000559790 CLTCL1P53675 1640 aa28.91■■■□□ 2.22
CDC42BPB-206ENST00000559790 NUP155O75694 1391 aa28.91■■■□□ 2.22
CDC42BPB-206ENST00000559790 FAM135BQ49AJ0 1406 aa28.89■■■□□ 2.22
CDC42BPB-206ENST00000559790 XRN1Q8IZH2 1706 aaKnown RBP28.89■■■□□ 2.21
CDC42BPB-206ENST00000559790 ITGAEP38570 1179 aa28.88■■■□□ 2.21
CDC42BPB-206ENST00000559790 RBM33Q96EV2 1170 aaKnown RBP28.88■■■□□ 2.21
CDC42BPB-206ENST00000559790 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.86■■■□□ 2.21
CDC42BPB-206ENST00000559790 NAIPQ13075 1403 aa28.86■■■□□ 2.21
CDC42BPB-206ENST00000559790 SENP3Q9H4L4 574 aaPredicted RBP28.85■■■□□ 2.21
CDC42BPB-206ENST00000559790 SETBP1Q9Y6X0 1596 aa28.84■■■□□ 2.21
CDC42BPB-206ENST00000559790 TRPM2O94759 1503 aa28.84■■■□□ 2.21
CDC42BPB-206ENST00000559790 PHLPP1O60346 1717 aa28.82■■■□□ 2.2
CDC42BPB-206ENST00000559790 KIF1BO60333 1816 aa28.82■■■□□ 2.2
CDC42BPB-206ENST00000559790 NEXMIFQ5QGS0 1516 aa28.81■■■□□ 2.2
CDC42BPB-206ENST00000559790 SETD1AO15047 1707 aaKnown RBP28.8■■■□□ 2.2
CDC42BPB-206ENST00000559790 PTPRUQ92729 1446 aa28.8■■■□□ 2.2
CDC42BPB-206ENST00000559790 PROSER2Q86WR7 435 aaPredicted RBP28.8■■■□□ 2.2
CDC42BPB-206ENST00000559790 COL16A1Q07092 1604 aaPredicted RBP28.8■■■□□ 2.2
CDC42BPB-206ENST00000559790 NUTM2DQ5VT03 806 aaPredicted RBP28.78■■■□□ 2.2
CDC42BPB-206ENST00000559790 TBX22Q9Y458 520 aa28.77■■■□□ 2.2
CDC42BPB-206ENST00000559790 PPP1R15AO75807 674 aaPredicted RBP28.75■■■□□ 2.19
CDC42BPB-206ENST00000559790 CHGAP10645 457 aaKnown RBP28.74■■■□□ 2.19
CDC42BPB-206ENST00000559790 MSH6P52701 1360 aa28.74■■■□□ 2.19
CDC42BPB-206ENST00000559790 PIK3R4Q99570 1358 aa28.74■■■□□ 2.19
CDC42BPB-206ENST00000559790 HFM1A2PYH4 1435 aa28.73■■■□□ 2.19
CDC42BPB-206ENST00000559790 NCOA3Q9Y6Q9 1424 aa28.72■■■□□ 2.19
CDC42BPB-206ENST00000559790 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.72■■■□□ 2.19
CDC42BPB-206ENST00000559790 BCANQ96GW7 911 aa28.7■■■□□ 2.18
CDC42BPB-206ENST00000559790 NALCNQ8IZF0 1738 aa28.69■■■□□ 2.18
CDC42BPB-206ENST00000559790 RGS17Q9UGC6 210 aaPredicted RBP28.69■■■□□ 2.18
CDC42BPB-206ENST00000559790 PPLO60437 1756 aa28.69■■■□□ 2.18
CDC42BPB-206ENST00000559790 AHDC1Q5TGY3 1603 aaPredicted RBP28.68■■■□□ 2.18
CDC42BPB-206ENST00000559790 HDGFP51858 240 aaKnown RBP28.66■■■□□ 2.18
CDC42BPB-206ENST00000559790 SHPRHQ149N8 1683 aa28.63■■■□□ 2.17
CDC42BPB-206ENST00000559790 SLAIN2Q9P270 581 aa28.62■■■□□ 2.17
CDC42BPB-206ENST00000559790 METP08581 1390 aa28.62■■■□□ 2.17
CDC42BPB-206ENST00000559790 NHSL1Q5SYE7 1610 aa28.61■■■□□ 2.17
CDC42BPB-206ENST00000559790 IFT172Q9UG01 1749 aa28.6■■■□□ 2.17
CDC42BPB-206ENST00000559790 PHF23Q9BUL5 403 aaPredicted RBP28.59■■■□□ 2.17
CDC42BPB-206ENST00000559790 DCCP43146 1447 aa28.58■■■□□ 2.17
CDC42BPB-206ENST00000559790 LRP6O75581 1613 aa28.56■■■□□ 2.16
CDC42BPB-206ENST00000559790 AMOTL2Q9Y2J4 779 aa28.55■■■□□ 2.16
CDC42BPB-206ENST00000559790 ASXL1Q8IXJ9 1541 aa28.53■■■□□ 2.16
CDC42BPB-206ENST00000559790 MST1RQ04912 1400 aa28.52■■■□□ 2.16
CDC42BPB-206ENST00000559790 PRAG1Q86YV5 1406 aa28.52■■■□□ 2.16
CDC42BPB-206ENST00000559790 C19orf44Q9H6X5 657 aa28.5■■■□□ 2.15
CDC42BPB-206ENST00000559790 ADGRL3Q9HAR2 1447 aa28.5■■■□□ 2.15
CDC42BPB-206ENST00000559790 JCADQ9P266 1359 aa28.5■■■□□ 2.15
CDC42BPB-206ENST00000559790 LAMC1P11047 1609 aa28.48■■■□□ 2.15
CDC42BPB-206ENST00000559790 ZNF326Q5BKZ1 582 aaKnown RBP28.47■■■□□ 2.15
CDC42BPB-206ENST00000559790 CADPS2Q86UW7 1296 aa28.46■■■□□ 2.15
CDC42BPB-206ENST00000559790 PTCH1Q13635 1447 aa28.45■■■□□ 2.15
CDC42BPB-206ENST00000559790 POTEAQ6S8J7 498 aa28.45■■■□□ 2.14
CDC42BPB-206ENST00000559790 BRINP3Q76B58 766 aa28.43■■■□□ 2.14
CDC42BPB-206ENST00000559790 C14orf37Q86TY3 774 aa28.43■■■□□ 2.14
CDC42BPB-206ENST00000559790 ATF3P18847 181 aa28.4■■■□□ 2.14
CDC42BPB-206ENST00000559790 SPATA31E1Q6ZUB1 1445 aa28.4■■■□□ 2.14
CDC42BPB-206ENST00000559790 TRIM52Q96A61 297 aa28.39■■■□□ 2.14
CDC42BPB-206ENST00000559790 ROBO2Q9HCK4 1378 aa28.38■■■□□ 2.13
CDC42BPB-206ENST00000559790 KNDC1Q76NI1 1749 aa28.38■■■□□ 2.13
CDC42BPB-206ENST00000559790 SLC4A1APQ9BWU0 796 aaKnown RBP28.38■■■□□ 2.13
CDC42BPB-206ENST00000559790 FOXD1Q16676 465 aa28.37■■■□□ 2.13
CDC42BPB-206ENST00000559790 SETD5Q9C0A6 1442 aa28.35■■■□□ 2.13
CDC42BPB-206ENST00000559790 SPATA31A6Q5VVP1 1343 aa28.32■■■□□ 2.12
CDC42BPB-206ENST00000559790 C1orf167Q5SNV9 1468 aa28.32■■■□□ 2.12
CDC42BPB-206ENST00000559790 CDC42BPGQ6DT37 1551 aa28.32■■■□□ 2.12
CDC42BPB-206ENST00000559790 RPGRIP1LQ68CZ1 1315 aa28.31■■■□□ 2.12
CDC42BPB-206ENST00000559790 CCDC144AA2RUR9 1427 aa28.28■■■□□ 2.12
CDC42BPB-206ENST00000559790 VGFO15240 615 aaPredicted RBP28.28■■■□□ 2.12
CDC42BPB-206ENST00000559790 TECPR2O15040 1411 aa28.26■■■□□ 2.11
CDC42BPB-206ENST00000559790 ADGRF5Q8IZF2 1346 aa28.25■■■□□ 2.11
CDC42BPB-206ENST00000559790 DDX17Q92841 729 aaKnown RBP28.25■■■□□ 2.11
CDC42BPB-206ENST00000559790 PIK3C2GO75747 1445 aa28.25■■■□□ 2.11
CDC42BPB-206ENST00000559790 PNPLA6Q8IY17 1366 aa28.24■■■□□ 2.11
CDC42BPB-206ENST00000559790 COL22A1Q8NFW1 1626 aaPredicted RBP28.23■■■□□ 2.11
CDC42BPB-206ENST00000559790 MPHOSPH9Q99550 1183 aa28.22■■■□□ 2.11
CDC42BPB-206ENST00000559790 FMN2Q9NZ56 1722 aa28.22■■■□□ 2.11
CDC42BPB-206ENST00000559790 NRXN1Q9ULB1 1477 aa28.21■■■□□ 2.11
CDC42BPB-206ENST00000559790 RGPD8O14715 1765 aaPredicted RBP28.19■■■□□ 2.1
CDC42BPB-206ENST00000559790 MARF1Q9Y4F3 1742 aaKnown RBP28.18■■■□□ 2.1
CDC42BPB-206ENST00000559790 ANKRD30BQ9BXX2 1392 aa28.16■■■□□ 2.1
CDC42BPB-206ENST00000559790 MYOM2P54296 1465 aa28.15■■■□□ 2.1
CDC42BPB-206ENST00000559790 PXDNQ92626 1479 aa28.14■■■□□ 2.09
CDC42BPB-206ENST00000559790 LRPPRCP42704 1394 aaKnown RBP28.13■■■□□ 2.09
CDC42BPB-206ENST00000559790 ORAI2Q96SN7 254 aa28.13■■■□□ 2.09
CDC42BPB-206ENST00000559790 PLEKHH1Q9ULM0 1364 aa28.12■■■□□ 2.09
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