RNA–Protein interactions for RNA: ENST00000559197.5

CPNE6-211, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-211ENST00000559197 PLEKHG1Q9ULL1 1385 aa25.57■■□□□ 1.68
CPNE6-211ENST00000559197 KCNA6P17658 529 aa25.57■■□□□ 1.68
CPNE6-211ENST00000559197 HSPA1LP34931 641 aa25.56■■□□□ 1.68
CPNE6-211ENST00000559197 NAIPQ13075 1403 aa25.55■■□□□ 1.68
CPNE6-211ENST00000559197 PPP1R15AO75807 674 aaPredicted RBP25.55■■□□□ 1.68
CPNE6-211ENST00000559197 CHGAP10645 457 aaKnown RBP25.54■■□□□ 1.68
CPNE6-211ENST00000559197 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.54■■□□□ 1.68
CPNE6-211ENST00000559197 BCANQ96GW7 911 aa25.54■■□□□ 1.68
CPNE6-211ENST00000559197 TMEM94Q12767 1356 aa25.51■■□□□ 1.67
CPNE6-211ENST00000559197 NKTRP30414 1462 aaKnown RBP25.51■■□□□ 1.67
CPNE6-211ENST00000559197 NWD1Q149M9 1564 aa25.51■■□□□ 1.67
CPNE6-211ENST00000559197 HFM1A2PYH4 1435 aa25.5■■□□□ 1.67
CPNE6-211ENST00000559197 MYO5BQ9ULV0 1848 aa25.48■■□□□ 1.67
CPNE6-211ENST00000559197 PROSER2Q86WR7 435 aaPredicted RBP25.46■■□□□ 1.67
CPNE6-211ENST00000559197 TBX22Q9Y458 520 aa25.46■■□□□ 1.67
CPNE6-211ENST00000559197 XIRP1Q702N8 1843 aaKnown RBP25.45■■□□□ 1.66
CPNE6-211ENST00000559197 SPHKAPQ2M3C7 1700 aa25.43■■□□□ 1.66
CPNE6-211ENST00000559197 SENP3Q9H4L4 574 aaPredicted RBP25.43■■□□□ 1.66
CPNE6-211ENST00000559197 ADAMTS13Q76LX8 1427 aa25.43■■□□□ 1.66
CPNE6-211ENST00000559197 NUTM2DQ5VT03 806 aaPredicted RBP25.42■■□□□ 1.66
CPNE6-211ENST00000559197 DIP2AQ14689 1571 aa25.42■■□□□ 1.66
CPNE6-211ENST00000559197 ILDR2Q71H61 639 aa25.41■■□□□ 1.66
CPNE6-211ENST00000559197 TRPM2O94759 1503 aa25.4■■□□□ 1.66
CPNE6-211ENST00000559197 PIK3R4Q99570 1358 aa25.4■■□□□ 1.66
CPNE6-211ENST00000559197 FAM135BQ49AJ0 1406 aa25.38■■□□□ 1.65
CPNE6-211ENST00000559197 RBM33Q96EV2 1170 aaKnown RBP25.38■■□□□ 1.65
CPNE6-211ENST00000559197 MSH6P52701 1360 aa25.36■■□□□ 1.65
CPNE6-211ENST00000559197 TRIM52Q96A61 297 aa25.36■■□□□ 1.65
CPNE6-211ENST00000559197 CHD2O14647 1828 aaKnown RBP25.35■■□□□ 1.65
CPNE6-211ENST00000559197 NCOA3Q9Y6Q9 1424 aa25.35■■□□□ 1.65
CPNE6-211ENST00000559197 MED1Q15648 1581 aaPredicted RBP25.35■■□□□ 1.65
CPNE6-211ENST00000559197 CLTCL1P53675 1640 aa25.34■■□□□ 1.65
CPNE6-211ENST00000559197 ZNF326Q5BKZ1 582 aaKnown RBP25.34■■□□□ 1.65
CPNE6-211ENST00000559197 SETBP1Q9Y6X0 1596 aa25.32■■□□□ 1.64
CPNE6-211ENST00000559197 SLC4A1APQ9BWU0 796 aaKnown RBP25.32■■□□□ 1.64
CPNE6-211ENST00000559197 NEXMIFQ5QGS0 1516 aa25.27■■□□□ 1.64
CPNE6-211ENST00000559197 NRXN3Q9Y4C0 1643 aa25.27■■□□□ 1.64
CPNE6-211ENST00000559197 SLAIN2Q9P270 581 aa25.26■■□□□ 1.63
CPNE6-211ENST00000559197 AMOTL2Q9Y2J4 779 aa25.26■■□□□ 1.63
CPNE6-211ENST00000559197 PTPRUQ92729 1446 aa25.26■■□□□ 1.63
CPNE6-211ENST00000559197 SOCS7O14512 581 aa25.25■■□□□ 1.63
CPNE6-211ENST00000559197 ROBO1Q9Y6N7 1651 aa25.25■■□□□ 1.63
CPNE6-211ENST00000559197 C14orf37Q86TY3 774 aa25.24■■□□□ 1.63
CPNE6-211ENST00000559197 C19orf44Q9H6X5 657 aa25.22■■□□□ 1.63
CPNE6-211ENST00000559197 KIF1BO60333 1816 aa25.21■■□□□ 1.63
CPNE6-211ENST00000559197 METP08581 1390 aa25.2■■□□□ 1.63
CPNE6-211ENST00000559197 CADPS2Q86UW7 1296 aa25.2■■□□□ 1.62
CPNE6-211ENST00000559197 XRN1Q8IZH2 1706 aaKnown RBP25.2■■□□□ 1.62
CPNE6-211ENST00000559197 RPGRIP1LQ68CZ1 1315 aa25.19■■□□□ 1.62
CPNE6-211ENST00000559197 VGFO15240 615 aaPredicted RBP25.19■■□□□ 1.62
CPNE6-211ENST00000559197 PHF23Q9BUL5 403 aaPredicted RBP25.19■■□□□ 1.62
CPNE6-211ENST00000559197 ACIN1Q9UKV3 1341 aaKnown RBP25.18■■□□□ 1.62
CPNE6-211ENST00000559197 ATF3P18847 181 aa25.17■■□□□ 1.62
CPNE6-211ENST00000559197 DCCP43146 1447 aa25.16■■□□□ 1.62
CPNE6-211ENST00000559197 FOXD1Q16676 465 aa25.15■■□□□ 1.62
CPNE6-211ENST00000559197 MPHOSPH9Q99550 1183 aa25.15■■□□□ 1.62
CPNE6-211ENST00000559197 CCDC144AA2RUR9 1427 aa25.14■■□□□ 1.62
CPNE6-211ENST00000559197 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.14■■□□□ 1.61
CPNE6-211ENST00000559197 SETD5Q9C0A6 1442 aa25.11■■□□□ 1.61
CPNE6-211ENST00000559197 PHLPP1O60346 1717 aa25.08■■□□□ 1.61
CPNE6-211ENST00000559197 JCADQ9P266 1359 aa25.07■■□□□ 1.6
CPNE6-211ENST00000559197 PTCH1Q13635 1447 aa25.07■■□□□ 1.6
CPNE6-211ENST00000559197 SPATA31E1Q6ZUB1 1445 aa25.07■■□□□ 1.6
CPNE6-211ENST00000559197 ADGRL3Q9HAR2 1447 aa25.07■■□□□ 1.6
CPNE6-211ENST00000559197 PRAG1Q86YV5 1406 aa25.06■■□□□ 1.6
CPNE6-211ENST00000559197 PPLO60437 1756 aa25.05■■□□□ 1.6
CPNE6-211ENST00000559197 COL16A1Q07092 1604 aaPredicted RBP25.05■■□□□ 1.6
CPNE6-211ENST00000559197 AHDC1Q5TGY3 1603 aaPredicted RBP25.04■■□□□ 1.6
CPNE6-211ENST00000559197 SETD1AO15047 1707 aaKnown RBP25.04■■□□□ 1.6
CPNE6-211ENST00000559197 MST1RQ04912 1400 aa25.03■■□□□ 1.6
CPNE6-211ENST00000559197 BRINP3Q76B58 766 aa25.03■■□□□ 1.6
CPNE6-211ENST00000559197 ANKRD30BQ9BXX2 1392 aa25.03■■□□□ 1.6
CPNE6-211ENST00000559197 RGS17Q9UGC6 210 aaPredicted RBP25.01■■□□□ 1.59
CPNE6-211ENST00000559197 RAB3GAP2Q9H2M9 1393 aa25.01■■□□□ 1.59
CPNE6-211ENST00000559197 ROBO2Q9HCK4 1378 aa25.01■■□□□ 1.59
CPNE6-211ENST00000559197 RGL3Q3MIN7 710 aa25■■□□□ 1.59
CPNE6-211ENST00000559197 ASXL1Q8IXJ9 1541 aa25■■□□□ 1.59
CPNE6-211ENST00000559197 ADGRF5Q8IZF2 1346 aa24.99■■□□□ 1.59
CPNE6-211ENST00000559197 NALCNQ8IZF0 1738 aa24.98■■□□□ 1.59
CPNE6-211ENST00000559197 SPATA31A6Q5VVP1 1343 aa24.96■■□□□ 1.59
CPNE6-211ENST00000559197 PIK3C2GO75747 1445 aa24.94■■□□□ 1.58
CPNE6-211ENST00000559197 IFT172Q9UG01 1749 aa24.93■■□□□ 1.58
CPNE6-211ENST00000559197 C1orf167Q5SNV9 1468 aa24.91■■□□□ 1.58
CPNE6-211ENST00000559197 TECPR2O15040 1411 aa24.9■■□□□ 1.58
CPNE6-211ENST00000559197 SHPRHQ149N8 1683 aa24.9■■□□□ 1.58
CPNE6-211ENST00000559197 LRP6O75581 1613 aa24.89■■□□□ 1.57
CPNE6-211ENST00000559197 LRPPRCP42704 1394 aaKnown RBP24.89■■□□□ 1.57
CPNE6-211ENST00000559197 NHSL1Q5SYE7 1610 aa24.89■■□□□ 1.57
CPNE6-211ENST00000559197 HRCP23327 699 aa24.87■■□□□ 1.57
CPNE6-211ENST00000559197 MYOM2P54296 1465 aa24.87■■□□□ 1.57
CPNE6-211ENST00000559197 NRXN1Q9ULB1 1477 aa24.86■■□□□ 1.57
CPNE6-211ENST00000559197 ABCC11Q96J66 1382 aa24.86■■□□□ 1.57
CPNE6-211ENST00000559197 POTEAQ6S8J7 498 aa24.86■■□□□ 1.57
CPNE6-211ENST00000559197 LRRC59Q96AG4 307 aaKnown RBP24.85■■□□□ 1.57
CPNE6-211ENST00000559197 CDC42BPGQ6DT37 1551 aa24.84■■□□□ 1.57
CPNE6-211ENST00000559197 MEX3CQ5U5Q3 659 aaKnown RBP24.83■■□□□ 1.57
CPNE6-211ENST00000559197 STK26Q9P289 416 aa24.83■■□□□ 1.57
CPNE6-211ENST00000559197 TMEM132EQ6IEE7 984 aa24.82■■□□□ 1.56
CPNE6-211ENST00000559197 DDX17Q92841 729 aaKnown RBP24.82■■□□□ 1.56
CPNE6-211ENST00000559197 C14orf93Q9H972 538 aaKnown RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms