RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 UBAP1LF5GYI3 381 aa12.43□□□□□ -0.42
TRAF3-205ENST00000558700 U3KPZ7 1027 aaPredicted RBP12.43□□□□□ -0.42
TRAF3-205ENST00000558700 STRCP1A6NGW2 1772 aa12.42□□□□□ -0.42
TRAF3-205ENST00000558700 NOS1P29475 1434 aa12.42□□□□□ -0.42
TRAF3-205ENST00000558700 ROCK1Q13464 1354 aa12.41□□□□□ -0.42
TRAF3-205ENST00000558700 IQGAP3Q86VI3 1631 aa12.4□□□□□ -0.42
TRAF3-205ENST00000558700 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
TRAF3-205ENST00000558700 TMEM2Q9UHN6 1383 aa12.39□□□□□ -0.43
TRAF3-205ENST00000558700 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
TRAF3-205ENST00000558700 EID1Q9Y6B2 187 aa12.38□□□□□ -0.43
TRAF3-205ENST00000558700 DISP3Q9P2K9 1392 aa12.38□□□□□ -0.43
TRAF3-205ENST00000558700 E9PCH4 1651 aa12.38□□□□□ -0.43
TRAF3-205ENST00000558700 LRRC7Q96NW7 1537 aa12.37□□□□□ -0.43
TRAF3-205ENST00000558700 MYO5BQ9ULV0 1848 aa12.37□□□□□ -0.43
TRAF3-205ENST00000558700 TOM1O60784 492 aa12.35□□□□□ -0.43
TRAF3-205ENST00000558700 TXNDC2Q86VQ3 553 aa12.35□□□□□ -0.43
TRAF3-205ENST00000558700 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
TRAF3-205ENST00000558700 ALKQ9UM73 1620 aa12.35□□□□□ -0.43
TRAF3-205ENST00000558700 XIRP1Q702N8 1843 aaKnown RBP12.34□□□□□ -0.43
TRAF3-205ENST00000558700 TMEM131LA2VDJ0 1609 aa12.34□□□□□ -0.43
TRAF3-205ENST00000558700 LTKP29376 864 aa12.34□□□□□ -0.43
TRAF3-205ENST00000558700 SLC52A1Q9NWF4 448 aa12.34□□□□□ -0.43
TRAF3-205ENST00000558700 NWD1Q149M9 1564 aa12.34□□□□□ -0.43
TRAF3-205ENST00000558700 IDI1Q13907 227 aa12.33□□□□□ -0.44
TRAF3-205ENST00000558700 NKTRP30414 1462 aaKnown RBP12.33□□□□□ -0.44
TRAF3-205ENST00000558700 SPHKAPQ2M3C7 1700 aa12.31□□□□□ -0.44
TRAF3-205ENST00000558700 ZFYVE9O95405 1425 aa12.31□□□□□ -0.44
TRAF3-205ENST00000558700 PIP4K2BP78356 416 aa12.31□□□□□ -0.44
TRAF3-205ENST00000558700 MED1Q15648 1581 aaPredicted RBP12.3□□□□□ -0.44
TRAF3-205ENST00000558700 RRBP1Q9P2E9 1410 aaKnown RBP12.3□□□□□ -0.44
TRAF3-205ENST00000558700 DIP2AQ14689 1571 aa12.3□□□□□ -0.44
TRAF3-205ENST00000558700 RIMS2Q9UQ26 1411 aa12.29□□□□□ -0.44
TRAF3-205ENST00000558700 NUP155O75694 1391 aa12.29□□□□□ -0.44
TRAF3-205ENST00000558700 PLEKHG1Q9ULL1 1385 aa12.29□□□□□ -0.44
TRAF3-205ENST00000558700 ITGAEP38570 1179 aa12.28□□□□□ -0.44
TRAF3-205ENST00000558700 HSPA1LP34931 641 aa12.27□□□□□ -0.45
TRAF3-205ENST00000558700 CHD2O14647 1828 aaKnown RBP12.27□□□□□ -0.45
TRAF3-205ENST00000558700 PPP1R15AO75807 674 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-205ENST00000558700 PPARGC1BQ86YN6 1023 aaKnown RBP12.26□□□□□ -0.45
TRAF3-205ENST00000558700 HDGFP51858 240 aaKnown RBP12.25□□□□□ -0.45
TRAF3-205ENST00000558700 TMEM94Q12767 1356 aa12.25□□□□□ -0.45
TRAF3-205ENST00000558700 SPDYE4A6NLX3 237 aa12.24□□□□□ -0.45
TRAF3-205ENST00000558700 TRPM2O94759 1503 aa12.24□□□□□ -0.45
TRAF3-205ENST00000558700 KCNA6P17658 529 aa12.24□□□□□ -0.45
TRAF3-205ENST00000558700 BCANQ96GW7 911 aa12.24□□□□□ -0.45
TRAF3-205ENST00000558700 CHGAP10645 457 aaKnown RBP12.23□□□□□ -0.45
TRAF3-205ENST00000558700 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRAF3-205ENST00000558700 SLC26A8Q96RN1 970 aa12.23□□□□□ -0.45
TRAF3-205ENST00000558700 ROBO1Q9Y6N7 1651 aa12.22□□□□□ -0.45
TRAF3-205ENST00000558700 NAIPQ13075 1403 aa12.22□□□□□ -0.45
TRAF3-205ENST00000558700 ILDR2Q71H61 639 aa12.22□□□□□ -0.45
TRAF3-205ENST00000558700 CLTCL1P53675 1640 aa12.22□□□□□ -0.45
TRAF3-205ENST00000558700 HFM1A2PYH4 1435 aa12.21□□□□□ -0.45
TRAF3-205ENST00000558700 MSH6P52701 1360 aa12.21□□□□□ -0.45
TRAF3-205ENST00000558700 KIF1BO60333 1816 aa12.21□□□□□ -0.45
TRAF3-205ENST00000558700 PROSER2Q86WR7 435 aaPredicted RBP12.21□□□□□ -0.45
TRAF3-205ENST00000558700 SETBP1Q9Y6X0 1596 aa12.21□□□□□ -0.46
TRAF3-205ENST00000558700 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
TRAF3-205ENST00000558700 PIK3R4Q99570 1358 aa12.2□□□□□ -0.46
TRAF3-205ENST00000558700 FAM135BQ49AJ0 1406 aa12.2□□□□□ -0.46
TRAF3-205ENST00000558700 NRXN3Q9Y4C0 1643 aa12.19□□□□□ -0.46
TRAF3-205ENST00000558700 XRN1Q8IZH2 1706 aaKnown RBP12.19□□□□□ -0.46
TRAF3-205ENST00000558700 SOCS7O14512 581 aa12.18□□□□□ -0.46
TRAF3-205ENST00000558700 NCOA3Q9Y6Q9 1424 aa12.18□□□□□ -0.46
TRAF3-205ENST00000558700 NEXMIFQ5QGS0 1516 aa12.17□□□□□ -0.46
TRAF3-205ENST00000558700 TBX22Q9Y458 520 aa12.17□□□□□ -0.46
TRAF3-205ENST00000558700 PHLPP1O60346 1717 aa12.17□□□□□ -0.46
TRAF3-205ENST00000558700 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-205ENST00000558700 NUTM2DQ5VT03 806 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-205ENST00000558700 ZNF326Q5BKZ1 582 aaKnown RBP12.13□□□□□ -0.47
TRAF3-205ENST00000558700 RBM33Q96EV2 1170 aaKnown RBP12.13□□□□□ -0.47
TRAF3-205ENST00000558700 DCCP43146 1447 aa12.12□□□□□ -0.47
TRAF3-205ENST00000558700 COL16A1Q07092 1604 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-205ENST00000558700 C14orf37Q86TY3 774 aa12.12□□□□□ -0.47
TRAF3-205ENST00000558700 PPLO60437 1756 aa12.12□□□□□ -0.47
TRAF3-205ENST00000558700 PTPRUQ92729 1446 aa12.11□□□□□ -0.47
TRAF3-205ENST00000558700 AHDC1Q5TGY3 1603 aaPredicted RBP12.11□□□□□ -0.47
TRAF3-205ENST00000558700 SETD1AO15047 1707 aaKnown RBP12.11□□□□□ -0.47
TRAF3-205ENST00000558700 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
TRAF3-205ENST00000558700 TRIM52Q96A61 297 aa12.11□□□□□ -0.47
TRAF3-205ENST00000558700 PLCB2Q00722 1185 aa12.1□□□□□ -0.47
TRAF3-205ENST00000558700 NALCNQ8IZF0 1738 aa12.1□□□□□ -0.47
TRAF3-205ENST00000558700 CADPS2Q86UW7 1296 aa12.09□□□□□ -0.47
TRAF3-205ENST00000558700 SLAIN2Q9P270 581 aa12.09□□□□□ -0.47
TRAF3-205ENST00000558700 SHPRHQ149N8 1683 aa12.09□□□□□ -0.47
TRAF3-205ENST00000558700 AMOTL2Q9Y2J4 779 aa12.08□□□□□ -0.48
TRAF3-205ENST00000558700 ATF3P18847 181 aa12.07□□□□□ -0.48
TRAF3-205ENST00000558700 PTCH1Q13635 1447 aa12.07□□□□□ -0.48
TRAF3-205ENST00000558700 C19orf44Q9H6X5 657 aa12.07□□□□□ -0.48
TRAF3-205ENST00000558700 ADGRL3Q9HAR2 1447 aa12.07□□□□□ -0.48
TRAF3-205ENST00000558700 IFT172Q9UG01 1749 aa12.07□□□□□ -0.48
TRAF3-205ENST00000558700 ASXL1Q8IXJ9 1541 aa12.06□□□□□ -0.48
TRAF3-205ENST00000558700 METP08581 1390 aa12.06□□□□□ -0.48
TRAF3-205ENST00000558700 JCADQ9P266 1359 aa12.06□□□□□ -0.48
TRAF3-205ENST00000558700 CCDC144AA2RUR9 1427 aa12.06□□□□□ -0.48
TRAF3-205ENST00000558700 PRAG1Q86YV5 1406 aa12.06□□□□□ -0.48
TRAF3-205ENST00000558700 NHSL1Q5SYE7 1610 aa12.06□□□□□ -0.48
TRAF3-205ENST00000558700 PROM2Q8N271 834 aa12.05□□□□□ -0.48
TRAF3-205ENST00000558700 RPGRIP1LQ68CZ1 1315 aa12.05□□□□□ -0.48
TRAF3-205ENST00000558700 VGFO15240 615 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms