RNA–Protein interactions for RNA: ENST00000558619.5

CRTC3-206, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-206ENST00000558619 NWD1Q149M9 1564 aa26.4■■□□□ 1.82
CRTC3-206ENST00000558619 BCANQ96GW7 911 aa26.38■■□□□ 1.81
CRTC3-206ENST00000558619 ZFYVE9O95405 1425 aa26.37■■□□□ 1.81
CRTC3-206ENST00000558619 TMEM94Q12767 1356 aa26.36■■□□□ 1.81
CRTC3-206ENST00000558619 KCNA6P17658 529 aa26.36■■□□□ 1.81
CRTC3-206ENST00000558619 ITGAEP38570 1179 aa26.36■■□□□ 1.81
CRTC3-206ENST00000558619 NKTRP30414 1462 aaKnown RBP26.36■■□□□ 1.81
CRTC3-206ENST00000558619 RIMS2Q9UQ26 1411 aa26.35■■□□□ 1.81
CRTC3-206ENST00000558619 PPARGC1BQ86YN6 1023 aaKnown RBP26.34■■□□□ 1.81
CRTC3-206ENST00000558619 PPP1R15AO75807 674 aaPredicted RBP26.33■■□□□ 1.81
CRTC3-206ENST00000558619 PLEKHG1Q9ULL1 1385 aa26.33■■□□□ 1.8
CRTC3-206ENST00000558619 CHD2O14647 1828 aaKnown RBP26.32■■□□□ 1.8
CRTC3-206ENST00000558619 CHGAP10645 457 aaKnown RBP26.31■■□□□ 1.8
CRTC3-206ENST00000558619 HDGFP51858 240 aaKnown RBP26.31■■□□□ 1.8
CRTC3-206ENST00000558619 PROSER2Q86WR7 435 aaPredicted RBP26.31■■□□□ 1.8
CRTC3-206ENST00000558619 PHF23Q9BUL5 403 aaPredicted RBP26.31■■□□□ 1.8
CRTC3-206ENST00000558619 NUP155O75694 1391 aa26.3■■□□□ 1.8
CRTC3-206ENST00000558619 ROBO1Q9Y6N7 1651 aa26.29■■□□□ 1.8
CRTC3-206ENST00000558619 RBM33Q96EV2 1170 aaKnown RBP26.27■■□□□ 1.8
CRTC3-206ENST00000558619 SPHKAPQ2M3C7 1700 aa26.26■■□□□ 1.79
CRTC3-206ENST00000558619 FAM135BQ49AJ0 1406 aa26.26■■□□□ 1.79
CRTC3-206ENST00000558619 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.25■■□□□ 1.79
CRTC3-206ENST00000558619 DIP2AQ14689 1571 aa26.24■■□□□ 1.79
CRTC3-206ENST00000558619 MSH6P52701 1360 aa26.23■■□□□ 1.79
CRTC3-206ENST00000558619 NUTM2DQ5VT03 806 aaPredicted RBP26.2■■□□□ 1.78
CRTC3-206ENST00000558619 ADAMTS13Q76LX8 1427 aa26.18■■□□□ 1.78
CRTC3-206ENST00000558619 TBX22Q9Y458 520 aa26.18■■□□□ 1.78
CRTC3-206ENST00000558619 RRBP1Q9P2E9 1410 aaKnown RBP26.17■■□□□ 1.78
CRTC3-206ENST00000558619 TRPM2O94759 1503 aa26.16■■□□□ 1.78
CRTC3-206ENST00000558619 PHLPP1O60346 1717 aa26.15■■□□□ 1.78
CRTC3-206ENST00000558619 PIK3R4Q99570 1358 aa26.13■■□□□ 1.77
CRTC3-206ENST00000558619 NCOA3Q9Y6Q9 1424 aa26.12■■□□□ 1.77
CRTC3-206ENST00000558619 C14orf37Q86TY3 774 aa26.1■■□□□ 1.77
CRTC3-206ENST00000558619 SLAIN2Q9P270 581 aa26.1■■□□□ 1.77
CRTC3-206ENST00000558619 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.1■■□□□ 1.77
CRTC3-206ENST00000558619 CLTCL1P53675 1640 aa26.1■■□□□ 1.77
CRTC3-206ENST00000558619 NRXN3Q9Y4C0 1643 aa26.09■■□□□ 1.77
CRTC3-206ENST00000558619 KIF1BO60333 1816 aa26.08■■□□□ 1.77
CRTC3-206ENST00000558619 SETBP1Q9Y6X0 1596 aa26.07■■□□□ 1.76
CRTC3-206ENST00000558619 NAIPQ13075 1403 aa26.07■■□□□ 1.76
CRTC3-206ENST00000558619 ZNF326Q5BKZ1 582 aaKnown RBP26.06■■□□□ 1.76
CRTC3-206ENST00000558619 XRN1Q8IZH2 1706 aaKnown RBP26.04■■□□□ 1.76
CRTC3-206ENST00000558619 PTPRUQ92729 1446 aa26.04■■□□□ 1.76
CRTC3-206ENST00000558619 COL16A1Q07092 1604 aaPredicted RBP26.03■■□□□ 1.76
CRTC3-206ENST00000558619 AMOTL2Q9Y2J4 779 aa26.02■■□□□ 1.76
CRTC3-206ENST00000558619 NEXMIFQ5QGS0 1516 aa26.01■■□□□ 1.75
CRTC3-206ENST00000558619 CADPS2Q86UW7 1296 aa26■■□□□ 1.75
CRTC3-206ENST00000558619 RGS17Q9UGC6 210 aaPredicted RBP26■■□□□ 1.75
CRTC3-206ENST00000558619 ATF3P18847 181 aa25.99■■□□□ 1.75
CRTC3-206ENST00000558619 C19orf44Q9H6X5 657 aa25.99■■□□□ 1.75
CRTC3-206ENST00000558619 HFM1A2PYH4 1435 aa25.98■■□□□ 1.75
CRTC3-206ENST00000558619 JCADQ9P266 1359 aa25.98■■□□□ 1.75
CRTC3-206ENST00000558619 AHDC1Q5TGY3 1603 aaPredicted RBP25.97■■□□□ 1.75
CRTC3-206ENST00000558619 TRIM52Q96A61 297 aa25.95■■□□□ 1.74
CRTC3-206ENST00000558619 DCCP43146 1447 aa25.94■■□□□ 1.74
CRTC3-206ENST00000558619 METP08581 1390 aa25.93■■□□□ 1.74
CRTC3-206ENST00000558619 SHPRHQ149N8 1683 aa25.92■■□□□ 1.74
CRTC3-206ENST00000558619 NALCNQ8IZF0 1738 aa25.89■■□□□ 1.74
CRTC3-206ENST00000558619 SETD1AO15047 1707 aaKnown RBP25.88■■□□□ 1.73
CRTC3-206ENST00000558619 POTEAQ6S8J7 498 aa25.87■■□□□ 1.73
CRTC3-206ENST00000558619 SLC4A1APQ9BWU0 796 aaKnown RBP25.87■■□□□ 1.73
CRTC3-206ENST00000558619 ASXL1Q8IXJ9 1541 aa25.87■■□□□ 1.73
CRTC3-206ENST00000558619 PPLO60437 1756 aa25.87■■□□□ 1.73
CRTC3-206ENST00000558619 NHSL1Q5SYE7 1610 aa25.85■■□□□ 1.73
CRTC3-206ENST00000558619 BRINP3Q76B58 766 aa25.85■■□□□ 1.73
CRTC3-206ENST00000558619 MST1RQ04912 1400 aa25.85■■□□□ 1.73
CRTC3-206ENST00000558619 ADGRL3Q9HAR2 1447 aa25.85■■□□□ 1.73
CRTC3-206ENST00000558619 SPATA31A6Q5VVP1 1343 aa25.85■■□□□ 1.73
CRTC3-206ENST00000558619 LRP6O75581 1613 aa25.85■■□□□ 1.73
CRTC3-206ENST00000558619 VGFO15240 615 aaPredicted RBP25.82■■□□□ 1.72
CRTC3-206ENST00000558619 MEX3CQ5U5Q3 659 aaKnown RBP25.81■■□□□ 1.72
CRTC3-206ENST00000558619 RPGRIP1LQ68CZ1 1315 aa25.79■■□□□ 1.72
CRTC3-206ENST00000558619 PTCH1Q13635 1447 aa25.79■■□□□ 1.72
CRTC3-206ENST00000558619 SETD5Q9C0A6 1442 aa25.74■■□□□ 1.71
CRTC3-206ENST00000558619 FOXD1Q16676 465 aa25.74■■□□□ 1.71
CRTC3-206ENST00000558619 CCDC144AA2RUR9 1427 aa25.73■■□□□ 1.71
CRTC3-206ENST00000558619 IFT172Q9UG01 1749 aa25.72■■□□□ 1.71
CRTC3-206ENST00000558619 PRAG1Q86YV5 1406 aa25.71■■□□□ 1.71
CRTC3-206ENST00000558619 ROBO2Q9HCK4 1378 aa25.71■■□□□ 1.71
CRTC3-206ENST00000558619 NUTM2BA6NNL0 878 aaPredicted RBP25.7■■□□□ 1.7
CRTC3-206ENST00000558619 NUTM2EB1AL46 878 aaPredicted RBP25.7■■□□□ 1.7
CRTC3-206ENST00000558619 ZNF772Q68DY9 489 aaPredicted RBP25.7■■□□□ 1.7
CRTC3-206ENST00000558619 NUTM2AQ8IVF1 878 aaPredicted RBP25.7■■□□□ 1.7
CRTC3-206ENST00000558619 C1orf167Q5SNV9 1468 aa25.7■■□□□ 1.7
CRTC3-206ENST00000558619 LRRC59Q96AG4 307 aaKnown RBP25.68■■□□□ 1.7
CRTC3-206ENST00000558619 LAMC1P11047 1609 aa25.67■■□□□ 1.7
CRTC3-206ENST00000558619 DDX17Q92841 729 aaKnown RBP25.66■■□□□ 1.7
CRTC3-206ENST00000558619 MPHOSPH9Q99550 1183 aa25.65■■□□□ 1.7
CRTC3-206ENST00000558619 SPATA31E1Q6ZUB1 1445 aa25.63■■□□□ 1.69
CRTC3-206ENST00000558619 RGL3Q3MIN7 710 aa25.63■■□□□ 1.69
CRTC3-206ENST00000558619 PNPLA6Q8IY17 1366 aa25.63■■□□□ 1.69
CRTC3-206ENST00000558619 CDC42BPGQ6DT37 1551 aa25.62■■□□□ 1.69
CRTC3-206ENST00000558619 ADGRF5Q8IZF2 1346 aa25.62■■□□□ 1.69
CRTC3-206ENST00000558619 ANKRD30BQ9BXX2 1392 aa25.61■■□□□ 1.69
CRTC3-206ENST00000558619 KNDC1Q76NI1 1749 aa25.61■■□□□ 1.69
CRTC3-206ENST00000558619 AFF2P51816 1311 aa25.59■■□□□ 1.69
CRTC3-206ENST00000558619 ORAI2Q96SN7 254 aa25.58■■□□□ 1.69
CRTC3-206ENST00000558619 ACIN1Q9UKV3 1341 aaKnown RBP25.57■■□□□ 1.68
CRTC3-206ENST00000558619 PIK3C2GO75747 1445 aa25.55■■□□□ 1.68
CRTC3-206ENST00000558619 RXRBP28702 533 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms