RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 HFM1A2PYH4 1435 aa23.42■■□□□ 1.34
CSHL1-208ENST00000558609 ZFYVE9O95405 1425 aa23.41■■□□□ 1.34
CSHL1-208ENST00000558609 HDGFP51858 240 aaKnown RBP23.4■■□□□ 1.34
CSHL1-208ENST00000558609 LRRC7Q96NW7 1537 aa23.39■■□□□ 1.34
CSHL1-208ENST00000558609 MYO5BQ9ULV0 1848 aa23.39■■□□□ 1.33
CSHL1-208ENST00000558609 RIMS2Q9UQ26 1411 aa23.37■■□□□ 1.33
CSHL1-208ENST00000558609 CHGAP10645 457 aaKnown RBP23.37■■□□□ 1.33
CSHL1-208ENST00000558609 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.35■■□□□ 1.33
CSHL1-208ENST00000558609 SLC26A8Q96RN1 970 aa23.35■■□□□ 1.33
CSHL1-208ENST00000558609 PLEKHG1Q9ULL1 1385 aa23.35■■□□□ 1.33
CSHL1-208ENST00000558609 KCNA6P17658 529 aa23.33■■□□□ 1.33
CSHL1-208ENST00000558609 SPHKAPQ2M3C7 1700 aa23.33■■□□□ 1.32
CSHL1-208ENST00000558609 PPP1R15AO75807 674 aaPredicted RBP23.32■■□□□ 1.32
CSHL1-208ENST00000558609 BCANQ96GW7 911 aa23.32■■□□□ 1.32
CSHL1-208ENST00000558609 SENP3Q9H4L4 574 aaPredicted RBP23.32■■□□□ 1.32
CSHL1-208ENST00000558609 TRIM52Q96A61 297 aa23.31■■□□□ 1.32
CSHL1-208ENST00000558609 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
CSHL1-208ENST00000558609 TBX22Q9Y458 520 aa23.27■■□□□ 1.32
CSHL1-208ENST00000558609 TRPM2O94759 1503 aa23.25■■□□□ 1.31
CSHL1-208ENST00000558609 NUTM2DQ5VT03 806 aaPredicted RBP23.25■■□□□ 1.31
CSHL1-208ENST00000558609 SLC4A1APQ9BWU0 796 aaKnown RBP23.25■■□□□ 1.31
CSHL1-208ENST00000558609 XIRP1Q702N8 1843 aaKnown RBP23.24■■□□□ 1.31
CSHL1-208ENST00000558609 NWD1Q149M9 1564 aa23.24■■□□□ 1.31
CSHL1-208ENST00000558609 PROSER2Q86WR7 435 aaPredicted RBP23.23■■□□□ 1.31
CSHL1-208ENST00000558609 TMEM94Q12767 1356 aa23.23■■□□□ 1.31
CSHL1-208ENST00000558609 ADAMTS13Q76LX8 1427 aa23.23■■□□□ 1.31
CSHL1-208ENST00000558609 NKTRP30414 1462 aaKnown RBP23.23■■□□□ 1.31
CSHL1-208ENST00000558609 RGS17Q9UGC6 210 aaPredicted RBP23.22■■□□□ 1.31
CSHL1-208ENST00000558609 CLTCL1P53675 1640 aa23.22■■□□□ 1.31
CSHL1-208ENST00000558609 CHD2O14647 1828 aaKnown RBP23.2■■□□□ 1.3
CSHL1-208ENST00000558609 DIP2AQ14689 1571 aa23.19■■□□□ 1.3
CSHL1-208ENST00000558609 ZNF326Q5BKZ1 582 aaKnown RBP23.19■■□□□ 1.3
CSHL1-208ENST00000558609 PIK3R4Q99570 1358 aa23.18■■□□□ 1.3
CSHL1-208ENST00000558609 KIF1BO60333 1816 aa23.15■■□□□ 1.3
CSHL1-208ENST00000558609 ACIN1Q9UKV3 1341 aaKnown RBP23.15■■□□□ 1.3
CSHL1-208ENST00000558609 RBM33Q96EV2 1170 aaKnown RBP23.15■■□□□ 1.3
CSHL1-208ENST00000558609 MPHOSPH9Q99550 1183 aa23.13■■□□□ 1.29
CSHL1-208ENST00000558609 SETBP1Q9Y6X0 1596 aa23.13■■□□□ 1.29
CSHL1-208ENST00000558609 NEXMIFQ5QGS0 1516 aa23.13■■□□□ 1.29
CSHL1-208ENST00000558609 SETD5Q9C0A6 1442 aa23.12■■□□□ 1.29
CSHL1-208ENST00000558609 NCOA3Q9Y6Q9 1424 aa23.11■■□□□ 1.29
CSHL1-208ENST00000558609 FOXD1Q16676 465 aa23.11■■□□□ 1.29
CSHL1-208ENST00000558609 NRXN3Q9Y4C0 1643 aa23.11■■□□□ 1.29
CSHL1-208ENST00000558609 MSH6P52701 1360 aa23.1■■□□□ 1.29
CSHL1-208ENST00000558609 FAM135BQ49AJ0 1406 aa23.09■■□□□ 1.29
CSHL1-208ENST00000558609 AMOTL2Q9Y2J4 779 aa23.09■■□□□ 1.29
CSHL1-208ENST00000558609 RPGRIP1LQ68CZ1 1315 aa23.08■■□□□ 1.29
CSHL1-208ENST00000558609 PTPRUQ92729 1446 aa23.08■■□□□ 1.29
CSHL1-208ENST00000558609 VGFO15240 615 aaPredicted RBP23.07■■□□□ 1.28
CSHL1-208ENST00000558609 CCDC144AA2RUR9 1427 aa23.04■■□□□ 1.28
CSHL1-208ENST00000558609 METP08581 1390 aa23.03■■□□□ 1.28
CSHL1-208ENST00000558609 POTEAQ6S8J7 498 aa23.03■■□□□ 1.28
CSHL1-208ENST00000558609 SLAIN2Q9P270 581 aa23.03■■□□□ 1.28
CSHL1-208ENST00000558609 RAB3GAP2Q9H2M9 1393 aa23.02■■□□□ 1.28
CSHL1-208ENST00000558609 C14orf37Q86TY3 774 aa23.01■■□□□ 1.27
CSHL1-208ENST00000558609 C19orf44Q9H6X5 657 aa23.01■■□□□ 1.27
CSHL1-208ENST00000558609 XRN1Q8IZH2 1706 aaKnown RBP23.01■■□□□ 1.27
CSHL1-208ENST00000558609 ROBO1Q9Y6N7 1651 aa22.99■■□□□ 1.27
CSHL1-208ENST00000558609 PPLO60437 1756 aa22.99■■□□□ 1.27
CSHL1-208ENST00000558609 SPATA31E1Q6ZUB1 1445 aa22.98■■□□□ 1.27
CSHL1-208ENST00000558609 CADPS2Q86UW7 1296 aa22.97■■□□□ 1.27
CSHL1-208ENST00000558609 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.96■■□□□ 1.27
CSHL1-208ENST00000558609 ATF3P18847 181 aa22.95■■□□□ 1.26
CSHL1-208ENST00000558609 HRCP23327 699 aa22.95■■□□□ 1.26
CSHL1-208ENST00000558609 RGL3Q3MIN7 710 aa22.94■■□□□ 1.26
CSHL1-208ENST00000558609 SETD1AO15047 1707 aaKnown RBP22.93■■□□□ 1.26
CSHL1-208ENST00000558609 DCCP43146 1447 aa22.92■■□□□ 1.26
CSHL1-208ENST00000558609 ANKRD30BQ9BXX2 1392 aa22.92■■□□□ 1.26
CSHL1-208ENST00000558609 ADGRF5Q8IZF2 1346 aa22.9■■□□□ 1.26
CSHL1-208ENST00000558609 PTCH1Q13635 1447 aa22.88■■□□□ 1.25
CSHL1-208ENST00000558609 PRAG1Q86YV5 1406 aa22.88■■□□□ 1.25
CSHL1-208ENST00000558609 IFT172Q9UG01 1749 aa22.88■■□□□ 1.25
CSHL1-208ENST00000558609 ADGRL3Q9HAR2 1447 aa22.87■■□□□ 1.25
CSHL1-208ENST00000558609 ROBO2Q9HCK4 1378 aa22.85■■□□□ 1.25
CSHL1-208ENST00000558609 PHLPP1O60346 1717 aa22.84■■□□□ 1.25
CSHL1-208ENST00000558609 MST1RQ04912 1400 aa22.82■■□□□ 1.24
CSHL1-208ENST00000558609 BRINP3Q76B58 766 aa22.82■■□□□ 1.24
CSHL1-208ENST00000558609 PIK3C2GO75747 1445 aa22.82■■□□□ 1.24
CSHL1-208ENST00000558609 NALCNQ8IZF0 1738 aa22.81■■□□□ 1.24
CSHL1-208ENST00000558609 JCADQ9P266 1359 aa22.8■■□□□ 1.24
CSHL1-208ENST00000558609 AHDC1Q5TGY3 1603 aaPredicted RBP22.8■■□□□ 1.24
CSHL1-208ENST00000558609 COL16A1Q07092 1604 aaPredicted RBP22.79■■□□□ 1.24
CSHL1-208ENST00000558609 NRXN1Q9ULB1 1477 aa22.78■■□□□ 1.24
CSHL1-208ENST00000558609 LRPPRCP42704 1394 aaKnown RBP22.77■■□□□ 1.24
CSHL1-208ENST00000558609 MYOM2P54296 1465 aa22.77■■□□□ 1.24
CSHL1-208ENST00000558609 TECPR2O15040 1411 aa22.76■■□□□ 1.23
CSHL1-208ENST00000558609 C14orf93Q9H972 538 aaKnown RBP22.76■■□□□ 1.23
CSHL1-208ENST00000558609 ASXL1Q8IXJ9 1541 aa22.76■■□□□ 1.23
CSHL1-208ENST00000558609 ABCC11Q96J66 1382 aa22.76■■□□□ 1.23
CSHL1-208ENST00000558609 TMEM132EQ6IEE7 984 aa22.75■■□□□ 1.23
CSHL1-208ENST00000558609 STK26Q9P289 416 aa22.74■■□□□ 1.23
CSHL1-208ENST00000558609 C1orf167Q5SNV9 1468 aa22.73■■□□□ 1.23
CSHL1-208ENST00000558609 LRP6O75581 1613 aa22.72■■□□□ 1.23
CSHL1-208ENST00000558609 CFAP70Q5T0N1 1121 aa22.71■■□□□ 1.23
CSHL1-208ENST00000558609 YTHDC2Q9H6S0 1430 aaKnown RBP22.71■■□□□ 1.23
CSHL1-208ENST00000558609 WAPLQ7Z5K2 1190 aa22.7■■□□□ 1.22
CSHL1-208ENST00000558609 SIRT1Q96EB6 747 aa22.7■■□□□ 1.22
CSHL1-208ENST00000558609 SPATA31A6Q5VVP1 1343 aa22.7■■□□□ 1.22
CSHL1-208ENST00000558609 KNDC1Q76NI1 1749 aa22.7■■□□□ 1.22
CSHL1-208ENST00000558609 LAMC1P11047 1609 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms