RNA–Protein interactions for RNA: ENST00000558489.1

BMP4-203, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 605 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-203ENST00000558489 TOM1O60784 492 aa22.62■■□□□ 1.21
BMP4-203ENST00000558489 HSPA1LP34931 641 aa22.62■■□□□ 1.21
BMP4-203ENST00000558489 EID1Q9Y6B2 187 aa22.62■■□□□ 1.21
BMP4-203ENST00000558489 PIP4K2BP78356 416 aa22.61■■□□□ 1.21
BMP4-203ENST00000558489 STAG3Q9UJ98 1225 aa22.61■■□□□ 1.21
BMP4-203ENST00000558489 SETD5Q9C0A6 1442 aa22.6■■□□□ 1.21
BMP4-203ENST00000558489 CHD2O14647 1828 aaKnown RBP22.59■■□□□ 1.21
BMP4-203ENST00000558489 SPHKAPQ2M3C7 1700 aa22.57■■□□□ 1.2
BMP4-203ENST00000558489 MED1Q15648 1581 aaPredicted RBP22.57■■□□□ 1.2
BMP4-203ENST00000558489 SLC4A1APQ9BWU0 796 aaKnown RBP22.56■■□□□ 1.2
BMP4-203ENST00000558489 RIMS2Q9UQ26 1411 aa22.56■■□□□ 1.2
BMP4-203ENST00000558489 SCAF1Q9H7N4 1312 aaKnown RBP22.56■■□□□ 1.2
BMP4-203ENST00000558489 SLC26A8Q96RN1 970 aa22.55■■□□□ 1.2
BMP4-203ENST00000558489 PLEKHG1Q9ULL1 1385 aa22.54■■□□□ 1.2
BMP4-203ENST00000558489 HRCP23327 699 aa22.54■■□□□ 1.2
BMP4-203ENST00000558489 NKTRP30414 1462 aaKnown RBP22.54■■□□□ 1.2
BMP4-203ENST00000558489 KCNA6P17658 529 aa22.51■■□□□ 1.19
BMP4-203ENST00000558489 HDGFP51858 240 aaKnown RBP22.51■■□□□ 1.19
BMP4-203ENST00000558489 TMEM94Q12767 1356 aa22.5■■□□□ 1.19
BMP4-203ENST00000558489 ADAMTS13Q76LX8 1427 aa22.49■■□□□ 1.19
BMP4-203ENST00000558489 NRXN3Q9Y4C0 1643 aa22.49■■□□□ 1.19
BMP4-203ENST00000558489 MPHOSPH9Q99550 1183 aa22.47■■□□□ 1.19
BMP4-203ENST00000558489 RAB3GAP2Q9H2M9 1393 aa22.47■■□□□ 1.19
BMP4-203ENST00000558489 DIP2AQ14689 1571 aa22.46■■□□□ 1.19
BMP4-203ENST00000558489 CLTCL1P53675 1640 aa22.46■■□□□ 1.19
BMP4-203ENST00000558489 ROBO1Q9Y6N7 1651 aa22.45■■□□□ 1.18
BMP4-203ENST00000558489 CHGAP10645 457 aaKnown RBP22.44■■□□□ 1.18
BMP4-203ENST00000558489 RBM33Q96EV2 1170 aaKnown RBP22.44■■□□□ 1.18
BMP4-203ENST00000558489 SENP3Q9H4L4 574 aaPredicted RBP22.43■■□□□ 1.18
BMP4-203ENST00000558489 TRPM2O94759 1503 aa22.42■■□□□ 1.18
BMP4-203ENST00000558489 FAM135BQ49AJ0 1406 aa22.42■■□□□ 1.18
BMP4-203ENST00000558489 TRIM26Q12899 539 aaPredicted RBP22.42■■□□□ 1.18
BMP4-203ENST00000558489 SOCS7O14512 581 aa22.4■■□□□ 1.18
BMP4-203ENST00000558489 PROSER2Q86WR7 435 aaPredicted RBP22.4■■□□□ 1.18
BMP4-203ENST00000558489 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.4■■□□□ 1.18
BMP4-203ENST00000558489 TBX22Q9Y458 520 aa22.4■■□□□ 1.18
BMP4-203ENST00000558489 SETBP1Q9Y6X0 1596 aa22.4■■□□□ 1.18
BMP4-203ENST00000558489 NUTM2DQ5VT03 806 aaPredicted RBP22.39■■□□□ 1.17
BMP4-203ENST00000558489 XRN1Q8IZH2 1706 aaKnown RBP22.39■■□□□ 1.17
BMP4-203ENST00000558489 NEXMIFQ5QGS0 1516 aa22.38■■□□□ 1.17
BMP4-203ENST00000558489 PTPRUQ92729 1446 aa22.38■■□□□ 1.17
BMP4-203ENST00000558489 KIF1BO60333 1816 aa22.37■■□□□ 1.17
BMP4-203ENST00000558489 PPP1R15AO75807 674 aaPredicted RBP22.37■■□□□ 1.17
BMP4-203ENST00000558489 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.35■■□□□ 1.17
BMP4-203ENST00000558489 PIK3R4Q99570 1358 aa22.35■■□□□ 1.17
BMP4-203ENST00000558489 BCANQ96GW7 911 aa22.34■■□□□ 1.17
BMP4-203ENST00000558489 ZNF326Q5BKZ1 582 aaKnown RBP22.33■■□□□ 1.17
BMP4-203ENST00000558489 SETD1AO15047 1707 aaKnown RBP22.33■■□□□ 1.17
BMP4-203ENST00000558489 NCOA3Q9Y6Q9 1424 aa22.31■■□□□ 1.16
BMP4-203ENST00000558489 MSH6P52701 1360 aa22.31■■□□□ 1.16
BMP4-203ENST00000558489 CCDC144AA2RUR9 1427 aa22.31■■□□□ 1.16
BMP4-203ENST00000558489 FOXD1Q16676 465 aa22.3■■□□□ 1.16
BMP4-203ENST00000558489 PHLPP1O60346 1717 aa22.29■■□□□ 1.16
BMP4-203ENST00000558489 COL16A1Q07092 1604 aaPredicted RBP22.28■■□□□ 1.16
BMP4-203ENST00000558489 RPGRIP1LQ68CZ1 1315 aa22.27■■□□□ 1.16
BMP4-203ENST00000558489 PPLO60437 1756 aa22.26■■□□□ 1.15
BMP4-203ENST00000558489 METP08581 1390 aa22.25■■□□□ 1.15
BMP4-203ENST00000558489 SLAIN2Q9P270 581 aa22.24■■□□□ 1.15
BMP4-203ENST00000558489 VGFO15240 615 aaPredicted RBP22.23■■□□□ 1.15
BMP4-203ENST00000558489 NALCNQ8IZF0 1738 aa22.23■■□□□ 1.15
BMP4-203ENST00000558489 AHDC1Q5TGY3 1603 aaPredicted RBP22.22■■□□□ 1.15
BMP4-203ENST00000558489 RGS17Q9UGC6 210 aaPredicted RBP22.22■■□□□ 1.15
BMP4-203ENST00000558489 AMOTL2Q9Y2J4 779 aa22.22■■□□□ 1.15
BMP4-203ENST00000558489 DCCP43146 1447 aa22.19■■□□□ 1.14
BMP4-203ENST00000558489 IFT172Q9UG01 1749 aa22.19■■□□□ 1.14
BMP4-203ENST00000558489 C19orf44Q9H6X5 657 aa22.18■■□□□ 1.14
BMP4-203ENST00000558489 ANKRD30BQ9BXX2 1392 aa22.17■■□□□ 1.14
BMP4-203ENST00000558489 PRAG1Q86YV5 1406 aa22.15■■□□□ 1.14
BMP4-203ENST00000558489 SHPRHQ149N8 1683 aa22.15■■□□□ 1.14
BMP4-203ENST00000558489 RGL3Q3MIN7 710 aa22.15■■□□□ 1.14
BMP4-203ENST00000558489 NHSL1Q5SYE7 1610 aa22.15■■□□□ 1.14
BMP4-203ENST00000558489 MST1RQ04912 1400 aa22.14■■□□□ 1.14
BMP4-203ENST00000558489 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
BMP4-203ENST00000558489 ADGRL3Q9HAR2 1447 aa22.14■■□□□ 1.13
BMP4-203ENST00000558489 CADPS2Q86UW7 1296 aa22.13■■□□□ 1.13
BMP4-203ENST00000558489 LRP6O75581 1613 aa22.12■■□□□ 1.13
BMP4-203ENST00000558489 SPATA31E1Q6ZUB1 1445 aa22.12■■□□□ 1.13
BMP4-203ENST00000558489 ASXL1Q8IXJ9 1541 aa22.11■■□□□ 1.13
BMP4-203ENST00000558489 C14orf37Q86TY3 774 aa22.11■■□□□ 1.13
BMP4-203ENST00000558489 STAC3Q96MF2 364 aa22.11■■□□□ 1.13
BMP4-203ENST00000558489 PTCH1Q13635 1447 aa22.11■■□□□ 1.13
BMP4-203ENST00000558489 JCADQ9P266 1359 aa22.11■■□□□ 1.13
BMP4-203ENST00000558489 BRINP3Q76B58 766 aa22.09■■□□□ 1.13
BMP4-203ENST00000558489 ATF3P18847 181 aa22.08■■□□□ 1.13
BMP4-203ENST00000558489 ROBO2Q9HCK4 1378 aa22.08■■□□□ 1.12
BMP4-203ENST00000558489 LAMC1P11047 1609 aa22.07■■□□□ 1.12
BMP4-203ENST00000558489 POTEAQ6S8J7 498 aa22.05■■□□□ 1.12
BMP4-203ENST00000558489 KNDC1Q76NI1 1749 aa22.01■■□□□ 1.11
BMP4-203ENST00000558489 ADGRF5Q8IZF2 1346 aa22.01■■□□□ 1.11
BMP4-203ENST00000558489 PCGF6Q9BYE7 350 aa22■■□□□ 1.11
BMP4-203ENST00000558489 C1orf167Q5SNV9 1468 aa22■■□□□ 1.11
BMP4-203ENST00000558489 DHX57Q6P158 1386 aaKnown RBP21.99■■□□□ 1.11
BMP4-203ENST00000558489 PIK3C2GO75747 1445 aa21.98■■□□□ 1.11
BMP4-203ENST00000558489 DCAF11Q8TEB1 546 aa21.98■■□□□ 1.11
BMP4-203ENST00000558489 SPATA31A6Q5VVP1 1343 aa21.98■■□□□ 1.11
BMP4-203ENST00000558489 TECPR2O15040 1411 aa21.97■■□□□ 1.11
BMP4-203ENST00000558489 CDC42BPGQ6DT37 1551 aa21.97■■□□□ 1.11
BMP4-203ENST00000558489 MYOM2P54296 1465 aa21.96■■□□□ 1.11
BMP4-203ENST00000558489 DDX17Q92841 729 aaKnown RBP21.95■■□□□ 1.1
BMP4-203ENST00000558489 NRXN1Q9ULB1 1477 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms