RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 PRAG1Q86YV5 1406 aa21.25■□□□□ 0.99
VPS18-202ENST00000558474 NRXN1Q9ULB1 1477 aa21.24■□□□□ 0.99
VPS18-202ENST00000558474 KIAA1210Q9ULL0 1709 aa21.24■□□□□ 0.99
VPS18-202ENST00000558474 CEP170BQ9Y4F5 1589 aaPredicted RBP21.23■□□□□ 0.99
VPS18-202ENST00000558474 VGFO15240 615 aaPredicted RBP21.22■□□□□ 0.99
VPS18-202ENST00000558474 HDGFP51858 240 aaKnown RBP21.22■□□□□ 0.99
VPS18-202ENST00000558474 KDM2AQ9Y2K7 1162 aa21.22■□□□□ 0.99
VPS18-202ENST00000558474 TRPM1Q7Z4N2 1603 aa21.21■□□□□ 0.99
VPS18-202ENST00000558474 RALGAPBQ86X10 1494 aa21.2■□□□□ 0.98
VPS18-202ENST00000558474 KDM4FA0A1W2PPD8 638 aa21.2■□□□□ 0.98
VPS18-202ENST00000558474 NBPF8Q3BBV2 869 aa21.2■□□□□ 0.98
VPS18-202ENST00000558474 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.2■□□□□ 0.98
VPS18-202ENST00000558474 SLIT1O75093 1534 aa21.19■□□□□ 0.98
VPS18-202ENST00000558474 THEMISQ8N1K5 641 aaPredicted RBP21.18■□□□□ 0.98
VPS18-202ENST00000558474 TMEM2Q9UHN6 1383 aa21.17■□□□□ 0.98
VPS18-202ENST00000558474 RIMS2Q9UQ26 1411 aa21.17■□□□□ 0.98
VPS18-202ENST00000558474 ARHGAP23Q9P227 1491 aa21.17■□□□□ 0.98
VPS18-202ENST00000558474 LAMC1P11047 1609 aa21.17■□□□□ 0.98
VPS18-202ENST00000558474 PIK3C2GO75747 1445 aa21.16■□□□□ 0.98
VPS18-202ENST00000558474 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
VPS18-202ENST00000558474 GPRASP1Q5JY77 1395 aa21.13■□□□□ 0.97
VPS18-202ENST00000558474 ADGRF5Q8IZF2 1346 aa21.13■□□□□ 0.97
VPS18-202ENST00000558474 SETBP1Q9Y6X0 1596 aa21.12■□□□□ 0.97
VPS18-202ENST00000558474 ROCK2O75116 1388 aaKnown RBP21.1■□□□□ 0.97
VPS18-202ENST00000558474 EID1Q9Y6B2 187 aa21.09■□□□□ 0.97
VPS18-202ENST00000558474 C14orf93Q9H972 538 aaKnown RBP21.08■□□□□ 0.97
VPS18-202ENST00000558474 PLEKHG1Q9ULL1 1385 aa21.06■□□□□ 0.96
VPS18-202ENST00000558474 EIF4G2P78344 907 aaKnown RBP eCLIP21.04■□□□□ 0.96
VPS18-202ENST00000558474 CARD11Q9BXL7 1154 aa21.04■□□□□ 0.96
VPS18-202ENST00000558474 SCAF11Q99590 1463 aaKnown RBP21.04■□□□□ 0.96
VPS18-202ENST00000558474 ALKQ9UM73 1620 aa21.04■□□□□ 0.96
VPS18-202ENST00000558474 TXNDC2Q86VQ3 553 aa21.03■□□□□ 0.96
VPS18-202ENST00000558474 NRXN3Q9Y4C0 1643 aa21.03■□□□□ 0.96
VPS18-202ENST00000558474 IQGAP1P46940 1657 aa21.02■□□□□ 0.96
VPS18-202ENST00000558474 SETD1AO15047 1707 aaKnown RBP21.02■□□□□ 0.96
VPS18-202ENST00000558474 CFAP70Q5T0N1 1121 aa21.02■□□□□ 0.96
VPS18-202ENST00000558474 ADGRB1O14514 1584 aa21.02■□□□□ 0.95
VPS18-202ENST00000558474 LTKP29376 864 aa21.01■□□□□ 0.95
VPS18-202ENST00000558474 NBPF1Q3BBV0 1214 aa21.01■□□□□ 0.95
VPS18-202ENST00000558474 NUTM2DQ5VT03 806 aaPredicted RBP21.01■□□□□ 0.95
VPS18-202ENST00000558474 ANKLE2Q86XL3 938 aa21.01■□□□□ 0.95
VPS18-202ENST00000558474 DIP2AQ14689 1571 aa21.01■□□□□ 0.95
VPS18-202ENST00000558474 POLR1AO95602 1720 aaPredicted RBP21.01■□□□□ 0.95
VPS18-202ENST00000558474 USP47Q96K76 1375 aa20.98■□□□□ 0.95
VPS18-202ENST00000558474 MED14O60244 1454 aa20.97■□□□□ 0.95
VPS18-202ENST00000558474 ZNF316A6NFI3 1004 aaPredicted RBP20.97■□□□□ 0.95
VPS18-202ENST00000558474 EIF3AQ14152 1382 aaKnown RBP20.97■□□□□ 0.95
VPS18-202ENST00000558474 LMTK3Q96Q04 1460 aa20.95■□□□□ 0.94
VPS18-202ENST00000558474 ADAMTS13Q76LX8 1427 aa20.95■□□□□ 0.94
VPS18-202ENST00000558474 ASXL1Q8IXJ9 1541 aa20.94■□□□□ 0.94
VPS18-202ENST00000558474 HSPA5P11021 654 aaKnown RBP20.94■□□□□ 0.94
VPS18-202ENST00000558474 TBX22Q9Y458 520 aa20.94■□□□□ 0.94
VPS18-202ENST00000558474 SLC24A1O60721 1099 aa20.93■□□□□ 0.94
VPS18-202ENST00000558474 KNDC1Q76NI1 1749 aa20.91■□□□□ 0.94
VPS18-202ENST00000558474 PIK3R4Q99570 1358 aa20.91■□□□□ 0.94
VPS18-202ENST00000558474 DLC1Q96QB1 1528 aa20.9■□□□□ 0.94
VPS18-202ENST00000558474 YTHDC2Q9H6S0 1430 aaKnown RBP20.9■□□□□ 0.94
VPS18-202ENST00000558474 BCANQ96GW7 911 aa20.9■□□□□ 0.94
VPS18-202ENST00000558474 NPHP4O75161 1426 aaPredicted RBP20.89■□□□□ 0.94
VPS18-202ENST00000558474 LRPPRCP42704 1394 aaKnown RBP20.89■□□□□ 0.93
VPS18-202ENST00000558474 ARHGEF28Q8N1W1 1705 aaKnown RBP20.89■□□□□ 0.93
VPS18-202ENST00000558474 ABCC11Q96J66 1382 aa20.88■□□□□ 0.93
VPS18-202ENST00000558474 TMEM132EQ6IEE7 984 aa20.88■□□□□ 0.93
VPS18-202ENST00000558474 TECPR2O15040 1411 aa20.87■□□□□ 0.93
VPS18-202ENST00000558474 ST20-MTHFSA0A0A6YYL1 179 aa20.87■□□□□ 0.93
VPS18-202ENST00000558474 SIRT1Q96EB6 747 aa20.87■□□□□ 0.93
VPS18-202ENST00000558474 SBNO2Q9Y2G9 1366 aa20.86■□□□□ 0.93
VPS18-202ENST00000558474 METP08581 1390 aa20.85■□□□□ 0.93
VPS18-202ENST00000558474 CPS1P31327 1500 aa20.83■□□□□ 0.93
VPS18-202ENST00000558474 TRAK1Q9UPV9 953 aa20.83■□□□□ 0.93
VPS18-202ENST00000558474 CENPJQ9HC77 1338 aaPredicted RBP20.82■□□□□ 0.92
VPS18-202ENST00000558474 FAM135BQ49AJ0 1406 aa20.82■□□□□ 0.92
VPS18-202ENST00000558474 SLC26A8Q96RN1 970 aa20.82■□□□□ 0.92
VPS18-202ENST00000558474 CHD2O14647 1828 aaKnown RBP20.82■□□□□ 0.92
VPS18-202ENST00000558474 STRCQ7RTU9 1775 aa20.82■□□□□ 0.92
VPS18-202ENST00000558474 NCKAP5LQ9HCH0 1330 aa20.81■□□□□ 0.92
VPS18-202ENST00000558474 QRICH2Q9H0J4 1663 aa20.81■□□□□ 0.92
VPS18-202ENST00000558474 XRN1Q8IZH2 1706 aaKnown RBP20.81■□□□□ 0.92
VPS18-202ENST00000558474 TESK2Q96S53 571 aa20.8■□□□□ 0.92
VPS18-202ENST00000558474 HIRIP3Q9BW71 556 aaPredicted RBP20.8■□□□□ 0.92
VPS18-202ENST00000558474 PTCH1Q13635 1447 aa20.78■□□□□ 0.92
VPS18-202ENST00000558474 HSPA2P54652 639 aa20.78■□□□□ 0.92
VPS18-202ENST00000558474 TMF1P82094 1093 aa20.78■□□□□ 0.92
VPS18-202ENST00000558474 SENP3Q9H4L4 574 aaPredicted RBP20.77■□□□□ 0.92
VPS18-202ENST00000558474 STK26Q9P289 416 aa20.77■□□□□ 0.92
VPS18-202ENST00000558474 PTPRUQ92729 1446 aa20.77■□□□□ 0.91
VPS18-202ENST00000558474 NWD1Q149M9 1564 aa20.76■□□□□ 0.91
VPS18-202ENST00000558474 CDCA8Q53HL2 280 aa20.76■□□□□ 0.91
VPS18-202ENST00000558474 POGKQ9P215 609 aa20.74■□□□□ 0.91
VPS18-202ENST00000558474 AMOTL2Q9Y2J4 779 aa20.74■□□□□ 0.91
VPS18-202ENST00000558474 DMRT2Q9Y5R5 561 aa20.74■□□□□ 0.91
VPS18-202ENST00000558474 CCDC7Q96M83 1385 aa20.73■□□□□ 0.91
VPS18-202ENST00000558474 PUS7Q96PZ0 661 aaKnown RBP20.73■□□□□ 0.91
VPS18-202ENST00000558474 PRAM1Q96QH2 718 aa20.73■□□□□ 0.91
VPS18-202ENST00000558474 KIF7Q2M1P5 1343 aa20.72■□□□□ 0.91
VPS18-202ENST00000558474 WASHC2AQ641Q2 1341 aa20.72■□□□□ 0.91
VPS18-202ENST00000558474 KCNA6P17658 529 aa20.71■□□□□ 0.91
VPS18-202ENST00000558474 C11orf95C9JLR9 678 aaPredicted RBP20.7■□□□□ 0.9
VPS18-202ENST00000558474 ROBO2Q9HCK4 1378 aa20.7■□□□□ 0.9
VPS18-202ENST00000558474 NKTRP30414 1462 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms