RNA–Protein interactions for RNA: ENST00000558455.1

TMOD3-203, Transcript of tropomodulin 3, humanhuman

TSL 3

Gene TMOD3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-203ENST00000558455 PPP1R15AO75807 674 aaPredicted RBP31.06■■■□□ 2.56
TMOD3-203ENST00000558455 HDGFP51858 240 aaKnown RBP31.06■■■□□ 2.56
TMOD3-203ENST00000558455 ILDR1Q86SU0 546 aaPredicted RBP31.05■■■□□ 2.56
TMOD3-203ENST00000558455 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.04■■■□□ 2.56
TMOD3-203ENST00000558455 FBXO41Q8TF61 875 aa31.04■■■□□ 2.56
TMOD3-203ENST00000558455 PLEKHG1Q9ULL1 1385 aa31.04■■■□□ 2.56
TMOD3-203ENST00000558455 NUTM2DQ5VT03 806 aaPredicted RBP31.03■■■□□ 2.56
TMOD3-203ENST00000558455 CPS1P31327 1500 aa31.02■■■□□ 2.56
TMOD3-203ENST00000558455 HRCP23327 699 aa31.01■■■□□ 2.55
TMOD3-203ENST00000558455 SENP3Q9H4L4 574 aaPredicted RBP31.01■■■□□ 2.55
TMOD3-203ENST00000558455 ZNF326Q5BKZ1 582 aaKnown RBP31■■■□□ 2.55
TMOD3-203ENST00000558455 SLC26A8Q96RN1 970 aa31■■■□□ 2.55
TMOD3-203ENST00000558455 IQSEC2Q5JU85 1478 aa31■■■□□ 2.55
TMOD3-203ENST00000558455 BCANQ96GW7 911 aa30.99■■■□□ 2.55
TMOD3-203ENST00000558455 KIF1BO60333 1816 aa30.98■■■□□ 2.55
TMOD3-203ENST00000558455 CCDC144AA2RUR9 1427 aa30.98■■■□□ 2.55
TMOD3-203ENST00000558455 STRCP1A6NGW2 1772 aa30.96■■■□□ 2.55
TMOD3-203ENST00000558455 NEXMIFQ5QGS0 1516 aa30.93■■■□□ 2.54
TMOD3-203ENST00000558455 ADAMTS13Q76LX8 1427 aa30.9■■■□□ 2.54
TMOD3-203ENST00000558455 LRRC7Q96NW7 1537 aa30.88■■■□□ 2.53
TMOD3-203ENST00000558455 TBX22Q9Y458 520 aa30.86■■■□□ 2.53
TMOD3-203ENST00000558455 DIP2AQ14689 1571 aa30.86■■■□□ 2.53
TMOD3-203ENST00000558455 SPATA31E1Q6ZUB1 1445 aa30.85■■■□□ 2.53
TMOD3-203ENST00000558455 KCNA6P17658 529 aa30.85■■■□□ 2.53
TMOD3-203ENST00000558455 SETBP1Q9Y6X0 1596 aa30.84■■■□□ 2.53
TMOD3-203ENST00000558455 NWD1Q149M9 1564 aa30.83■■■□□ 2.53
TMOD3-203ENST00000558455 RPGRIP1LQ68CZ1 1315 aa30.83■■■□□ 2.53
TMOD3-203ENST00000558455 NRXN3Q9Y4C0 1643 aa30.83■■■□□ 2.53
TMOD3-203ENST00000558455 ANKRD30BQ9BXX2 1392 aa30.82■■■□□ 2.52
TMOD3-203ENST00000558455 RGL3Q3MIN7 710 aa30.79■■■□□ 2.52
TMOD3-203ENST00000558455 NKTRP30414 1462 aaKnown RBP30.78■■■□□ 2.52
TMOD3-203ENST00000558455 VGFO15240 615 aaPredicted RBP30.78■■■□□ 2.52
TMOD3-203ENST00000558455 TRIM26Q12899 539 aaPredicted RBP30.78■■■□□ 2.52
TMOD3-203ENST00000558455 PPLO60437 1756 aa30.78■■■□□ 2.52
TMOD3-203ENST00000558455 UBAP1LF5GYI3 381 aa30.77■■■□□ 2.52
TMOD3-203ENST00000558455 PIK3R4Q99570 1358 aa30.76■■■□□ 2.51
TMOD3-203ENST00000558455 CHD2O14647 1828 aaKnown RBP30.75■■■□□ 2.51
TMOD3-203ENST00000558455 TMEM94Q12767 1356 aa30.73■■■□□ 2.51
TMOD3-203ENST00000558455 PROSER2Q86WR7 435 aaPredicted RBP30.72■■■□□ 2.51
TMOD3-203ENST00000558455 PTPRUQ92729 1446 aa30.71■■■□□ 2.51
TMOD3-203ENST00000558455 METP08581 1390 aa30.7■■■□□ 2.51
TMOD3-203ENST00000558455 XIRP1Q702N8 1843 aaKnown RBP30.7■■■□□ 2.5
TMOD3-203ENST00000558455 IFT172Q9UG01 1749 aa30.7■■■□□ 2.5
TMOD3-203ENST00000558455 RBM33Q96EV2 1170 aaKnown RBP30.69■■■□□ 2.5
TMOD3-203ENST00000558455 ADGRF5Q8IZF2 1346 aa30.68■■■□□ 2.5
TMOD3-203ENST00000558455 TOM1O60784 492 aa30.67■■■□□ 2.5
TMOD3-203ENST00000558455 AMOTL2Q9Y2J4 779 aa30.66■■■□□ 2.5
TMOD3-203ENST00000558455 ALKQ9UM73 1620 aa30.65■■■□□ 2.5
TMOD3-203ENST00000558455 SETD1AO15047 1707 aaKnown RBP30.63■■■□□ 2.49
TMOD3-203ENST00000558455 XRN1Q8IZH2 1706 aaKnown RBP30.63■■■□□ 2.49
TMOD3-203ENST00000558455 PIP4K2BP78356 416 aa30.6■■■□□ 2.49
TMOD3-203ENST00000558455 MYOM2P54296 1465 aa30.59■■■□□ 2.49
TMOD3-203ENST00000558455 PIK3C2GO75747 1445 aa30.59■■■□□ 2.49
TMOD3-203ENST00000558455 SCAF1Q9H7N4 1312 aaKnown RBP30.58■■■□□ 2.49
TMOD3-203ENST00000558455 NRXN1Q9ULB1 1477 aa30.56■■■□□ 2.48
TMOD3-203ENST00000558455 NCOA3Q9Y6Q9 1424 aa30.56■■■□□ 2.48
TMOD3-203ENST00000558455 MSH6P52701 1360 aa30.55■■■□□ 2.48
TMOD3-203ENST00000558455 C14orf37Q86TY3 774 aa30.51■■■□□ 2.47
TMOD3-203ENST00000558455 DHX57Q6P158 1386 aaKnown RBP30.51■■■□□ 2.47
TMOD3-203ENST00000558455 PTCH1Q13635 1447 aa30.48■■■□□ 2.47
TMOD3-203ENST00000558455 PRAG1Q86YV5 1406 aa30.48■■■□□ 2.47
TMOD3-203ENST00000558455 ASXL1Q8IXJ9 1541 aa30.48■■■□□ 2.47
TMOD3-203ENST00000558455 DCAF11Q8TEB1 546 aa30.48■■■□□ 2.47
TMOD3-203ENST00000558455 ROBO2Q9HCK4 1378 aa30.46■■■□□ 2.47
TMOD3-203ENST00000558455 KDM2AQ9Y2K7 1162 aa30.46■■■□□ 2.47
TMOD3-203ENST00000558455 C14orf93Q9H972 538 aaKnown RBP30.45■■■□□ 2.47
TMOD3-203ENST00000558455 C19orf44Q9H6X5 657 aa30.44■■■□□ 2.46
TMOD3-203ENST00000558455 CFAP70Q5T0N1 1121 aa30.43■■■□□ 2.46
TMOD3-203ENST00000558455 TMEM132EQ6IEE7 984 aa30.43■■■□□ 2.46
TMOD3-203ENST00000558455 LAMC1P11047 1609 aa30.43■■■□□ 2.46
TMOD3-203ENST00000558455 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.42■■■□□ 2.46
TMOD3-203ENST00000558455 LRPPRCP42704 1394 aaKnown RBP30.41■■■□□ 2.46
TMOD3-203ENST00000558455 STAC3Q96MF2 364 aa30.41■■■□□ 2.46
TMOD3-203ENST00000558455 HSPA1LP34931 641 aa30.4■■■□□ 2.46
TMOD3-203ENST00000558455 STK26Q9P289 416 aa30.4■■■□□ 2.46
TMOD3-203ENST00000558455 TECPR2O15040 1411 aa30.39■■■□□ 2.46
TMOD3-203ENST00000558455 ADGRL3Q9HAR2 1447 aa30.39■■■□□ 2.46
TMOD3-203ENST00000558455 DCCP43146 1447 aa30.39■■■□□ 2.45
TMOD3-203ENST00000558455 FAM135BQ49AJ0 1406 aa30.39■■■□□ 2.45
TMOD3-203ENST00000558455 ATF3P18847 181 aa30.38■■■□□ 2.45
TMOD3-203ENST00000558455 CADPS2Q86UW7 1296 aa30.38■■■□□ 2.45
TMOD3-203ENST00000558455 SIN3AQ96ST3 1273 aa30.38■■■□□ 2.45
TMOD3-203ENST00000558455 SLAIN2Q9P270 581 aa30.38■■■□□ 2.45
TMOD3-203ENST00000558455 YTHDC2Q9H6S0 1430 aaKnown RBP30.38■■■□□ 2.45
TMOD3-203ENST00000558455 ABCC11Q96J66 1382 aa30.37■■■□□ 2.45
TMOD3-203ENST00000558455 NALCNQ8IZF0 1738 aa30.36■■■□□ 2.45
TMOD3-203ENST00000558455 KNDC1Q76NI1 1749 aa30.34■■■□□ 2.45
TMOD3-203ENST00000558455 ROBO1Q9Y6N7 1651 aa30.34■■■□□ 2.45
TMOD3-203ENST00000558455 ADGRB1O14514 1584 aa30.32■■■□□ 2.45
TMOD3-203ENST00000558455 NEUROD1Q13562 356 aa30.32■■■□□ 2.44
TMOD3-203ENST00000558455 PCGF6Q9BYE7 350 aa30.31■■■□□ 2.44
TMOD3-203ENST00000558455 WAPLQ7Z5K2 1190 aa30.28■■■□□ 2.44
TMOD3-203ENST00000558455 PLEKHH1Q9ULM0 1364 aa30.28■■■□□ 2.44
TMOD3-203ENST00000558455 L3MBTL2Q969R5 705 aa30.27■■■□□ 2.44
TMOD3-203ENST00000558455 MST1RQ04912 1400 aa30.27■■■□□ 2.44
TMOD3-203ENST00000558455 SIRT1Q96EB6 747 aa30.23■■■□□ 2.43
TMOD3-203ENST00000558455 DLC1Q96QB1 1528 aa30.22■■■□□ 2.43
TMOD3-203ENST00000558455 CDC42BPGQ6DT37 1551 aa30.2■■■□□ 2.43
TMOD3-203ENST00000558455 BRINP3Q76B58 766 aa30.19■■■□□ 2.42
TMOD3-203ENST00000558455 PRAM1Q96QH2 718 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms