RNA–Protein interactions for RNA: ENST00000558339.1

SPG21-205, Transcript of SPG21, maspardin, human

TSL 4

Gene SPG21, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG21-205	ENST00000558339	FAM135B	Q49AJ0	1406 aa		34.01	■■■■□ 3.03
SPG21-205	ENST00000558339	GCC2	Q8IWJ2	1684 aa		34	■■■■□ 3.03
SPG21-205	ENST00000558339	PROSER2	Q86WR7	435 aa	Predicted RBP	34	■■■■□ 3.03
SPG21-205	ENST00000558339	TMEM131L	A2VDJ0	1609 aa		34	■■■■□ 3.03
SPG21-205	ENST00000558339	RIMS2	Q9UQ26	1411 aa		33.99	■■■■□ 3.03
SPG21-205	ENST00000558339	PHF23	Q9BUL5	403 aa	Predicted RBP	33.99	■■■■□ 3.03
SPG21-205	ENST00000558339	NKTR	P30414	1462 aa	Known RBP	33.99	■■■■□ 3.03
SPG21-205	ENST00000558339	MYO5B	Q9ULV0	1848 aa		33.99	■■■■□ 3.03
SPG21-205	ENST00000558339	PLEKHG1	Q9ULL1	1385 aa		33.98	■■■■□ 3.03
SPG21-205	ENST00000558339	BCAN	Q96GW7	911 aa		33.96	■■■■□ 3.03
SPG21-205	ENST00000558339		E9PCH4	1651 aa		33.96	■■■■□ 3.03
SPG21-205	ENST00000558339	IQGAP3	Q86VI3	1631 aa		33.93	■■■■□ 3.02
SPG21-205	ENST00000558339	PPP1R15A	O75807	674 aa	Predicted RBP	33.9	■■■■□ 3.02
SPG21-205	ENST00000558339	CHGA	P10645	457 aa	Known RBP	33.88	■■■■□ 3.01
SPG21-205	ENST00000558339	ROBO1	Q9Y6N7	1651 aa		33.87	■■■■□ 3.01
SPG21-205	ENST00000558339	ITGAE	P38570	1179 aa		33.87	■■■■□ 3.01
SPG21-205	ENST00000558339	HDGF	P51858	240 aa	Known RBP	33.87	■■■■□ 3.01
SPG21-205	ENST00000558339	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.87	■■■■□ 3.01
SPG21-205	ENST00000558339	NUP155	O75694	1391 aa		33.86	■■■■□ 3.01
SPG21-205	ENST00000558339	RGS17	Q9UGC6	210 aa	Predicted RBP	33.86	■■■■□ 3.01
SPG21-205	ENST00000558339	CHD2	O14647	1828 aa	Known RBP	33.86	■■■■□ 3.01
SPG21-205	ENST00000558339	TBX22	Q9Y458	520 aa		33.85	■■■■□ 3.01
SPG21-205	ENST00000558339	MSH6	P52701	1360 aa		33.85	■■■■□ 3.01
SPG21-205	ENST00000558339	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.84	■■■■□ 3.01
SPG21-205	ENST00000558339	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.84	■■■■□ 3.01
SPG21-205	ENST00000558339	ADAMTS13	Q76LX8	1427 aa		33.84	■■■■□ 3.01
SPG21-205	ENST00000558339	SLAIN2	Q9P270	581 aa		33.77	■■■■□ 3
SPG21-205	ENST00000558339	DIP2A	Q14689	1571 aa		33.74	■■■□□ 2.99
SPG21-205	ENST00000558339	NCOA3	Q9Y6Q9	1424 aa		33.72	■■■□□ 2.99
SPG21-205	ENST00000558339	PIK3R4	Q99570	1358 aa		33.72	■■■□□ 2.99
SPG21-205	ENST00000558339	PTPRU	Q92729	1446 aa		33.68	■■■□□ 2.98
SPG21-205	ENST00000558339	PHLPP1	O60346	1717 aa		33.65	■■■□□ 2.98
SPG21-205	ENST00000558339	TRPM2	O94759	1503 aa		33.64	■■■□□ 2.98
SPG21-205	ENST00000558339	SPHKAP	Q2M3C7	1700 aa		33.64	■■■□□ 2.98
SPG21-205	ENST00000558339	POTEA	Q6S8J7	498 aa		33.63	■■■□□ 2.97
SPG21-205	ENST00000558339	RRBP1	Q9P2E9	1410 aa	Known RBP	33.62	■■■□□ 2.97
SPG21-205	ENST00000558339	NRXN3	Q9Y4C0	1643 aa		33.62	■■■□□ 2.97
SPG21-205	ENST00000558339	C14orf37	Q86TY3	774 aa		33.62	■■■□□ 2.97
SPG21-205	ENST00000558339	AMOTL2	Q9Y2J4	779 aa		33.62	■■■□□ 2.97
SPG21-205	ENST00000558339	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.61	■■■□□ 2.97
SPG21-205	ENST00000558339	JCAD	Q9P266	1359 aa		33.6	■■■□□ 2.97
SPG21-205	ENST00000558339	C19orf44	Q9H6X5	657 aa		33.6	■■■□□ 2.97
SPG21-205	ENST00000558339	COL16A1	Q07092	1604 aa	Predicted RBP	33.6	■■■□□ 2.97
SPG21-205	ENST00000558339	SETBP1	Q9Y6X0	1596 aa		33.58	■■■□□ 2.97
SPG21-205	ENST00000558339	CADPS2	Q86UW7	1296 aa		33.57	■■■□□ 2.96
SPG21-205	ENST00000558339	NAIP	Q13075	1403 aa		33.56	■■■□□ 2.96
SPG21-205	ENST00000558339	ATF3	P18847	181 aa		33.54	■■■□□ 2.96
SPG21-205	ENST00000558339	ZNF326	Q5BKZ1	582 aa	Known RBP	33.54	■■■□□ 2.96
SPG21-205	ENST00000558339	CLTCL1	P53675	1640 aa		33.53	■■■□□ 2.96
SPG21-205	ENST00000558339	XRN1	Q8IZH2	1706 aa	Known RBP	33.53	■■■□□ 2.96
SPG21-205	ENST00000558339	MET	P08581	1390 aa		33.51	■■■□□ 2.96
SPG21-205	ENST00000558339	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.51	■■■□□ 2.96
SPG21-205	ENST00000558339	NEXMIF	Q5QGS0	1516 aa		33.49	■■■□□ 2.95
SPG21-205	ENST00000558339	LRP6	O75581	1613 aa		33.47	■■■□□ 2.95
SPG21-205	ENST00000558339	DCC	P43146	1447 aa		33.46	■■■□□ 2.95
SPG21-205	ENST00000558339	BRINP3	Q76B58	766 aa		33.46	■■■□□ 2.95
SPG21-205	ENST00000558339	SPATA31A6	Q5VVP1	1343 aa		33.42	■■■□□ 2.94
SPG21-205	ENST00000558339	MST1R	Q04912	1400 aa		33.4	■■■□□ 2.94
SPG21-205	ENST00000558339	HFM1	A2PYH4	1435 aa		33.39	■■■□□ 2.94
SPG21-205	ENST00000558339	SHPRH	Q149N8	1683 aa		33.38	■■■□□ 2.93
SPG21-205	ENST00000558339	ASXL1	Q8IXJ9	1541 aa		33.38	■■■□□ 2.93
SPG21-205	ENST00000558339	TRIM52	Q96A61	297 aa		33.35	■■■□□ 2.93
SPG21-205	ENST00000558339	ADGRL3	Q9HAR2	1447 aa		33.35	■■■□□ 2.93
SPG21-205	ENST00000558339	KIF1B	O60333	1816 aa		33.35	■■■□□ 2.93
SPG21-205	ENST00000558339	MEX3C	Q5U5Q3	659 aa	Known RBP	33.3	■■■□□ 2.92
SPG21-205	ENST00000558339	NALCN	Q8IZF0	1738 aa		33.3	■■■□□ 2.92
SPG21-205	ENST00000558339	SETD5	Q9C0A6	1442 aa		33.29	■■■□□ 2.92
SPG21-205	ENST00000558339	SETD1A	O15047	1707 aa	Known RBP	33.29	■■■□□ 2.92
SPG21-205	ENST00000558339	NHSL1	Q5SYE7	1610 aa		33.28	■■■□□ 2.92
SPG21-205	ENST00000558339	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.28	■■■□□ 2.92
SPG21-205	ENST00000558339	VGF	O15240	615 aa	Predicted RBP	33.26	■■■□□ 2.91
SPG21-205	ENST00000558339	DDX17	Q92841	729 aa	Known RBP	33.25	■■■□□ 2.91
SPG21-205	ENST00000558339	PTCH1	Q13635	1447 aa		33.24	■■■□□ 2.91
SPG21-205	ENST00000558339	ROBO2	Q9HCK4	1378 aa		33.23	■■■□□ 2.91
SPG21-205	ENST00000558339	ZNF772	Q68DY9	489 aa	Predicted RBP	33.23	■■■□□ 2.91
SPG21-205	ENST00000558339	RPGRIP1L	Q68CZ1	1315 aa		33.23	■■■□□ 2.91
SPG21-205	ENST00000558339	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.22	■■■□□ 2.91
SPG21-205	ENST00000558339	NUTM2E	B1AL46	878 aa	Predicted RBP	33.22	■■■□□ 2.91
SPG21-205	ENST00000558339	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.22	■■■□□ 2.91
SPG21-205	ENST00000558339	PRAG1	Q86YV5	1406 aa		33.2	■■■□□ 2.91
SPG21-205	ENST00000558339	C1orf167	Q5SNV9	1468 aa		33.19	■■■□□ 2.9
SPG21-205	ENST00000558339	FOXD1	Q16676	465 aa		33.19	■■■□□ 2.9
SPG21-205	ENST00000558339	LRRC59	Q96AG4	307 aa	Known RBP	33.18	■■■□□ 2.9
SPG21-205	ENST00000558339	PPL	O60437	1756 aa		33.16	■■■□□ 2.9
SPG21-205	ENST00000558339	PNPLA6	Q8IY17	1366 aa		33.15	■■■□□ 2.9
SPG21-205	ENST00000558339	AFF2	P51816	1311 aa		33.11	■■■□□ 2.89
SPG21-205	ENST00000558339	ORAI2	Q96SN7	254 aa		33.1	■■■□□ 2.89
SPG21-205	ENST00000558339	LAMC1	P11047	1609 aa		33.1	■■■□□ 2.89
SPG21-205	ENST00000558339	ADGRF5	Q8IZF2	1346 aa		33.07	■■■□□ 2.88
SPG21-205	ENST00000558339	RXRB	P28702	533 aa		33.07	■■■□□ 2.88
SPG21-205	ENST00000558339	SPATA31E1	Q6ZUB1	1445 aa		33.06	■■■□□ 2.88
SPG21-205	ENST00000558339	SOS2	Q07890	1332 aa	Predicted RBP	33.05	■■■□□ 2.88
SPG21-205	ENST00000558339	CCDC144A	A2RUR9	1427 aa		33.05	■■■□□ 2.88
SPG21-205	ENST00000558339	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.03	■■■□□ 2.88
SPG21-205	ENST00000558339	MPHOSPH9	Q99550	1183 aa		33.03	■■■□□ 2.88
SPG21-205	ENST00000558339	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.02	■■■□□ 2.88
SPG21-205	ENST00000558339	C8orf37	Q96NL8	207 aa		33.02	■■■□□ 2.88
SPG21-205	ENST00000558339	RGL3	Q3MIN7	710 aa		33.01	■■■□□ 2.87
SPG21-205	ENST00000558339	CDC42BPG	Q6DT37	1551 aa		32.97	■■■□□ 2.87
SPG21-205	ENST00000558339	IFT172	Q9UG01	1749 aa		32.97	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms