RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
HERC1-202ENST00000558324 ZFYVE9O95405 1425 aa18.05■□□□□ 0.48
HERC1-202ENST00000558324 RIMS2Q9UQ26 1411 aa18.05■□□□□ 0.48
HERC1-202ENST00000558324 ALKQ9UM73 1620 aa18.02■□□□□ 0.48
HERC1-202ENST00000558324 NUTM2DQ5VT03 806 aaPredicted RBP18.02■□□□□ 0.48
HERC1-202ENST00000558324 DISP3Q9P2K9 1392 aa18.02■□□□□ 0.47
HERC1-202ENST00000558324 HFM1A2PYH4 1435 aa18■□□□□ 0.47
HERC1-202ENST00000558324 HSPA1LP34931 641 aa18■□□□□ 0.47
HERC1-202ENST00000558324 PLEKHG1Q9ULL1 1385 aa18■□□□□ 0.47
HERC1-202ENST00000558324 SPHKAPQ2M3C7 1700 aa18■□□□□ 0.47
HERC1-202ENST00000558324 HDGFP51858 240 aaKnown RBP17.99■□□□□ 0.47
HERC1-202ENST00000558324 KCNA6P17658 529 aa17.98■□□□□ 0.47
HERC1-202ENST00000558324 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
HERC1-202ENST00000558324 RBM33Q96EV2 1170 aaKnown RBP17.98■□□□□ 0.47
HERC1-202ENST00000558324 TMEM94Q12767 1356 aa17.97■□□□□ 0.47
HERC1-202ENST00000558324 XIRP1Q702N8 1843 aaKnown RBP17.96■□□□□ 0.47
HERC1-202ENST00000558324 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.96■□□□□ 0.47
HERC1-202ENST00000558324 NWD1Q149M9 1564 aa17.96■□□□□ 0.46
HERC1-202ENST00000558324 PROSER2Q86WR7 435 aaPredicted RBP17.95■□□□□ 0.46
HERC1-202ENST00000558324 NKTRP30414 1462 aaKnown RBP17.94■□□□□ 0.46
HERC1-202ENST00000558324 CLTCL1P53675 1640 aa17.94■□□□□ 0.46
HERC1-202ENST00000558324 ZNF326Q5BKZ1 582 aaKnown RBP17.93■□□□□ 0.46
HERC1-202ENST00000558324 TRPM2O94759 1503 aa17.93■□□□□ 0.46
HERC1-202ENST00000558324 ADAMTS13Q76LX8 1427 aa17.91■□□□□ 0.46
HERC1-202ENST00000558324 SLC4A1APQ9BWU0 796 aaKnown RBP17.9■□□□□ 0.46
HERC1-202ENST00000558324 TBX22Q9Y458 520 aa17.9■□□□□ 0.46
HERC1-202ENST00000558324 DIP2AQ14689 1571 aa17.89■□□□□ 0.45
HERC1-202ENST00000558324 CHD2O14647 1828 aaKnown RBP17.88■□□□□ 0.45
HERC1-202ENST00000558324 ILDR2Q71H61 639 aa17.87■□□□□ 0.45
HERC1-202ENST00000558324 MSH6P52701 1360 aa17.86■□□□□ 0.45
HERC1-202ENST00000558324 MED1Q15648 1581 aaPredicted RBP17.85■□□□□ 0.45
HERC1-202ENST00000558324 FOXD1Q16676 465 aa17.85■□□□□ 0.45
HERC1-202ENST00000558324 NEXMIFQ5QGS0 1516 aa17.85■□□□□ 0.45
HERC1-202ENST00000558324 C14orf37Q86TY3 774 aa17.85■□□□□ 0.45
HERC1-202ENST00000558324 NRXN3Q9Y4C0 1643 aa17.85■□□□□ 0.45
HERC1-202ENST00000558324 KIF1BO60333 1816 aa17.84■□□□□ 0.45
HERC1-202ENST00000558324 SETBP1Q9Y6X0 1596 aa17.83■□□□□ 0.45
HERC1-202ENST00000558324 PIK3R4Q99570 1358 aa17.83■□□□□ 0.45
HERC1-202ENST00000558324 PTPRUQ92729 1446 aa17.82■□□□□ 0.44
HERC1-202ENST00000558324 ROBO1Q9Y6N7 1651 aa17.81■□□□□ 0.44
HERC1-202ENST00000558324 AMOTL2Q9Y2J4 779 aa17.81■□□□□ 0.44
HERC1-202ENST00000558324 FAM135BQ49AJ0 1406 aa17.81■□□□□ 0.44
HERC1-202ENST00000558324 METP08581 1390 aa17.79■□□□□ 0.44
HERC1-202ENST00000558324 MPHOSPH9Q99550 1183 aa17.78■□□□□ 0.44
HERC1-202ENST00000558324 XRN1Q8IZH2 1706 aaKnown RBP17.78■□□□□ 0.44
HERC1-202ENST00000558324 SLAIN2Q9P270 581 aa17.77■□□□□ 0.44
HERC1-202ENST00000558324 SETD5Q9C0A6 1442 aa17.76■□□□□ 0.43
HERC1-202ENST00000558324 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
HERC1-202ENST00000558324 CCDC144AA2RUR9 1427 aa17.75■□□□□ 0.43
HERC1-202ENST00000558324 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
HERC1-202ENST00000558324 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.75■□□□□ 0.43
HERC1-202ENST00000558324 VGFO15240 615 aaPredicted RBP17.74■□□□□ 0.43
HERC1-202ENST00000558324 ATF3P18847 181 aa17.73■□□□□ 0.43
HERC1-202ENST00000558324 C19orf44Q9H6X5 657 aa17.73■□□□□ 0.43
HERC1-202ENST00000558324 RAB3GAP2Q9H2M9 1393 aa17.72■□□□□ 0.43
HERC1-202ENST00000558324 CADPS2Q86UW7 1296 aa17.72■□□□□ 0.43
HERC1-202ENST00000558324 RPGRIP1LQ68CZ1 1315 aa17.72■□□□□ 0.43
HERC1-202ENST00000558324 PPLO60437 1756 aa17.71■□□□□ 0.43
HERC1-202ENST00000558324 RGL3Q3MIN7 710 aa17.71■□□□□ 0.43
HERC1-202ENST00000558324 PHLPP1O60346 1717 aa17.7■□□□□ 0.42
HERC1-202ENST00000558324 SETD1AO15047 1707 aaKnown RBP17.69■□□□□ 0.42
HERC1-202ENST00000558324 SOCS7O14512 581 aa17.68■□□□□ 0.42
HERC1-202ENST00000558324 SPATA31E1Q6ZUB1 1445 aa17.68■□□□□ 0.42
HERC1-202ENST00000558324 DCCP43146 1447 aa17.66■□□□□ 0.42
HERC1-202ENST00000558324 ADGRL3Q9HAR2 1447 aa17.66■□□□□ 0.42
HERC1-202ENST00000558324 NALCNQ8IZF0 1738 aa17.66■□□□□ 0.42
HERC1-202ENST00000558324 ADGRF5Q8IZF2 1346 aa17.66■□□□□ 0.42
HERC1-202ENST00000558324 ACIN1Q9UKV3 1341 aaKnown RBP17.65■□□□□ 0.42
HERC1-202ENST00000558324 COL16A1Q07092 1604 aaPredicted RBP17.65■□□□□ 0.42
HERC1-202ENST00000558324 ROBO2Q9HCK4 1378 aa17.65■□□□□ 0.42
HERC1-202ENST00000558324 MST1RQ04912 1400 aa17.64■□□□□ 0.41
HERC1-202ENST00000558324 PTCH1Q13635 1447 aa17.64■□□□□ 0.41
HERC1-202ENST00000558324 BRINP3Q76B58 766 aa17.63■□□□□ 0.41
HERC1-202ENST00000558324 IFT172Q9UG01 1749 aa17.63■□□□□ 0.41
HERC1-202ENST00000558324 ANKRD30BQ9BXX2 1392 aa17.63■□□□□ 0.41
HERC1-202ENST00000558324 AHDC1Q5TGY3 1603 aaPredicted RBP17.62■□□□□ 0.41
HERC1-202ENST00000558324 JCADQ9P266 1359 aa17.62■□□□□ 0.41
HERC1-202ENST00000558324 ASXL1Q8IXJ9 1541 aa17.62■□□□□ 0.41
HERC1-202ENST00000558324 STK26Q9P289 416 aa17.59■□□□□ 0.41
HERC1-202ENST00000558324 PIK3C2GO75747 1445 aa17.58■□□□□ 0.41
HERC1-202ENST00000558324 PRAG1Q86YV5 1406 aa17.58■□□□□ 0.41
HERC1-202ENST00000558324 RGS17Q9UGC6 210 aaPredicted RBP17.58■□□□□ 0.4
HERC1-202ENST00000558324 TMEM132EQ6IEE7 984 aa17.57■□□□□ 0.4
HERC1-202ENST00000558324 DDX17Q92841 729 aaKnown RBP17.56■□□□□ 0.4
HERC1-202ENST00000558324 C1orf167Q5SNV9 1468 aa17.55■□□□□ 0.4
HERC1-202ENST00000558324 LRP6O75581 1613 aa17.54■□□□□ 0.4
HERC1-202ENST00000558324 NHSL1Q5SYE7 1610 aa17.54■□□□□ 0.4
HERC1-202ENST00000558324 LRPPRCP42704 1394 aaKnown RBP17.53■□□□□ 0.4
HERC1-202ENST00000558324 SHPRHQ149N8 1683 aa17.53■□□□□ 0.4
HERC1-202ENST00000558324 MYOM2P54296 1465 aa17.53■□□□□ 0.4
HERC1-202ENST00000558324 SPATA31A6Q5VVP1 1343 aa17.52■□□□□ 0.4
HERC1-202ENST00000558324 MEX3CQ5U5Q3 659 aaKnown RBP17.52■□□□□ 0.4
HERC1-202ENST00000558324 WAPLQ7Z5K2 1190 aa17.52■□□□□ 0.4
HERC1-202ENST00000558324 TECPR2O15040 1411 aa17.52■□□□□ 0.4
HERC1-202ENST00000558324 PLEKHH1Q9ULM0 1364 aa17.52■□□□□ 0.39
HERC1-202ENST00000558324 NRXN1Q9ULB1 1477 aa17.51■□□□□ 0.39
HERC1-202ENST00000558324 NUTM2BA6NNL0 878 aaPredicted RBP17.51■□□□□ 0.39
HERC1-202ENST00000558324 NUTM2EB1AL46 878 aaPredicted RBP17.51■□□□□ 0.39
HERC1-202ENST00000558324 POTEAQ6S8J7 498 aa17.51■□□□□ 0.39
HERC1-202ENST00000558324 NUTM2AQ8IVF1 878 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms