RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 STAG3Q9UJ98 1225 aa25.29■■□□□ 1.64
RPL28-205ENST00000558131 NKTRP30414 1462 aaKnown RBP25.28■■□□□ 1.64
RPL28-205ENST00000558131 SPHKAPQ2M3C7 1700 aa25.23■■□□□ 1.63
RPL28-205ENST00000558131 RIMS2Q9UQ26 1411 aa25.23■■□□□ 1.63
RPL28-205ENST00000558131 TMEM94Q12767 1356 aa25.23■■□□□ 1.63
RPL28-205ENST00000558131 SLC26A8Q96RN1 970 aa25.23■■□□□ 1.63
RPL28-205ENST00000558131 ROBO1Q9Y6N7 1651 aa25.23■■□□□ 1.63
RPL28-205ENST00000558131 PLEKHG1Q9ULL1 1385 aa25.22■■□□□ 1.63
RPL28-205ENST00000558131 KCNA6P17658 529 aa25.21■■□□□ 1.63
RPL28-205ENST00000558131 DIP2AQ14689 1571 aa25.18■■□□□ 1.62
RPL28-205ENST00000558131 FAM135BQ49AJ0 1406 aa25.17■■□□□ 1.62
RPL28-205ENST00000558131 ADAMTS13Q76LX8 1427 aa25.17■■□□□ 1.62
RPL28-205ENST00000558131 NRXN3Q9Y4C0 1643 aa25.16■■□□□ 1.62
RPL28-205ENST00000558131 PPARGC1BQ86YN6 1023 aaKnown RBP25.16■■□□□ 1.62
RPL28-205ENST00000558131 RRBP1Q9P2E9 1410 aaKnown RBP25.15■■□□□ 1.62
RPL28-205ENST00000558131 NUP155O75694 1391 aa25.14■■□□□ 1.61
RPL28-205ENST00000558131 RBM33Q96EV2 1170 aaKnown RBP25.13■■□□□ 1.61
RPL28-205ENST00000558131 SENP3Q9H4L4 574 aaPredicted RBP25.12■■□□□ 1.61
RPL28-205ENST00000558131 ITGAEP38570 1179 aa25.1■■□□□ 1.61
RPL28-205ENST00000558131 CLTCL1P53675 1640 aa25.1■■□□□ 1.61
RPL28-205ENST00000558131 PROSER2Q86WR7 435 aaPredicted RBP25.08■■□□□ 1.61
RPL28-205ENST00000558131 XRN1Q8IZH2 1706 aaKnown RBP25.08■■□□□ 1.61
RPL28-205ENST00000558131 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.07■■□□□ 1.6
RPL28-205ENST00000558131 SETBP1Q9Y6X0 1596 aa25.07■■□□□ 1.6
RPL28-205ENST00000558131 TRPM2O94759 1503 aa25.06■■□□□ 1.6
RPL28-205ENST00000558131 PHLPP1O60346 1717 aa25.06■■□□□ 1.6
RPL28-205ENST00000558131 NAIPQ13075 1403 aa25.05■■□□□ 1.6
RPL28-205ENST00000558131 PPP1R15AO75807 674 aaPredicted RBP25.04■■□□□ 1.6
RPL28-205ENST00000558131 TBX22Q9Y458 520 aa25.04■■□□□ 1.6
RPL28-205ENST00000558131 MSH6P52701 1360 aa25.04■■□□□ 1.6
RPL28-205ENST00000558131 PTPRUQ92729 1446 aa25.03■■□□□ 1.6
RPL28-205ENST00000558131 COL16A1Q07092 1604 aaPredicted RBP25.03■■□□□ 1.6
RPL28-205ENST00000558131 NEXMIFQ5QGS0 1516 aa25.02■■□□□ 1.6
RPL28-205ENST00000558131 CHGAP10645 457 aaKnown RBP25.02■■□□□ 1.6
RPL28-205ENST00000558131 NUTM2DQ5VT03 806 aaPredicted RBP25.02■■□□□ 1.6
RPL28-205ENST00000558131 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.02■■□□□ 1.6
RPL28-205ENST00000558131 PIK3R4Q99570 1358 aa25.02■■□□□ 1.6
RPL28-205ENST00000558131 NCOA3Q9Y6Q9 1424 aa25.02■■□□□ 1.6
RPL28-205ENST00000558131 BCANQ96GW7 911 aa25.01■■□□□ 1.59
RPL28-205ENST00000558131 KIF1BO60333 1816 aa25■■□□□ 1.59
RPL28-205ENST00000558131 HDGFP51858 240 aaKnown RBP24.99■■□□□ 1.59
RPL28-205ENST00000558131 SETD1AO15047 1707 aaKnown RBP24.98■■□□□ 1.59
RPL28-205ENST00000558131 RGS17Q9UGC6 210 aaPredicted RBP24.98■■□□□ 1.59
RPL28-205ENST00000558131 PHF23Q9BUL5 403 aaPredicted RBP24.96■■□□□ 1.59
RPL28-205ENST00000558131 AHDC1Q5TGY3 1603 aaPredicted RBP24.95■■□□□ 1.58
RPL28-205ENST00000558131 HFM1A2PYH4 1435 aa24.95■■□□□ 1.58
RPL28-205ENST00000558131 SLAIN2Q9P270 581 aa24.93■■□□□ 1.58
RPL28-205ENST00000558131 NALCNQ8IZF0 1738 aa24.92■■□□□ 1.58
RPL28-205ENST00000558131 SHPRHQ149N8 1683 aa24.9■■□□□ 1.58
RPL28-205ENST00000558131 PPLO60437 1756 aa24.88■■□□□ 1.57
RPL28-205ENST00000558131 METP08581 1390 aa24.88■■□□□ 1.57
RPL28-205ENST00000558131 DCCP43146 1447 aa24.86■■□□□ 1.57
RPL28-205ENST00000558131 NHSL1Q5SYE7 1610 aa24.86■■□□□ 1.57
RPL28-205ENST00000558131 AMOTL2Q9Y2J4 779 aa24.86■■□□□ 1.57
RPL28-205ENST00000558131 LRP6O75581 1613 aa24.85■■□□□ 1.57
RPL28-205ENST00000558131 JCADQ9P266 1359 aa24.83■■□□□ 1.57
RPL28-205ENST00000558131 C19orf44Q9H6X5 657 aa24.82■■□□□ 1.56
RPL28-205ENST00000558131 ASXL1Q8IXJ9 1541 aa24.81■■□□□ 1.56
RPL28-205ENST00000558131 MST1RQ04912 1400 aa24.81■■□□□ 1.56
RPL28-205ENST00000558131 ZNF326Q5BKZ1 582 aaKnown RBP24.8■■□□□ 1.56
RPL28-205ENST00000558131 CADPS2Q86UW7 1296 aa24.8■■□□□ 1.56
RPL28-205ENST00000558131 IFT172Q9UG01 1749 aa24.8■■□□□ 1.56
RPL28-205ENST00000558131 ADGRL3Q9HAR2 1447 aa24.78■■□□□ 1.56
RPL28-205ENST00000558131 POTEAQ6S8J7 498 aa24.78■■□□□ 1.56
RPL28-205ENST00000558131 C14orf37Q86TY3 774 aa24.78■■□□□ 1.56
RPL28-205ENST00000558131 PRAG1Q86YV5 1406 aa24.78■■□□□ 1.56
RPL28-205ENST00000558131 ATF3P18847 181 aa24.75■■□□□ 1.55
RPL28-205ENST00000558131 BRINP3Q76B58 766 aa24.75■■□□□ 1.55
RPL28-205ENST00000558131 PTCH1Q13635 1447 aa24.75■■□□□ 1.55
RPL28-205ENST00000558131 LAMC1P11047 1609 aa24.75■■□□□ 1.55
RPL28-205ENST00000558131 SPATA31A6Q5VVP1 1343 aa24.69■■□□□ 1.54
RPL28-205ENST00000558131 TRIM52Q96A61 297 aa24.69■■□□□ 1.54
RPL28-205ENST00000558131 SETD5Q9C0A6 1442 aa24.69■■□□□ 1.54
RPL28-205ENST00000558131 SLC4A1APQ9BWU0 796 aaKnown RBP24.68■■□□□ 1.54
RPL28-205ENST00000558131 ROBO2Q9HCK4 1378 aa24.67■■□□□ 1.54
RPL28-205ENST00000558131 SPATA31E1Q6ZUB1 1445 aa24.66■■□□□ 1.54
RPL28-205ENST00000558131 FOXD1Q16676 465 aa24.64■■□□□ 1.54
RPL28-205ENST00000558131 C1orf167Q5SNV9 1468 aa24.64■■□□□ 1.53
RPL28-205ENST00000558131 KNDC1Q76NI1 1749 aa24.64■■□□□ 1.53
RPL28-205ENST00000558131 RPGRIP1LQ68CZ1 1315 aa24.63■■□□□ 1.53
RPL28-205ENST00000558131 VGFO15240 615 aaPredicted RBP24.62■■□□□ 1.53
RPL28-205ENST00000558131 CDC42BPGQ6DT37 1551 aa24.61■■□□□ 1.53
RPL28-205ENST00000558131 CCDC144AA2RUR9 1427 aa24.59■■□□□ 1.53
RPL28-205ENST00000558131 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
RPL28-205ENST00000558131 PNPLA6Q8IY17 1366 aa24.56■■□□□ 1.52
RPL28-205ENST00000558131 TECPR2O15040 1411 aa24.56■■□□□ 1.52
RPL28-205ENST00000558131 ADGRF5Q8IZF2 1346 aa24.55■■□□□ 1.52
RPL28-205ENST00000558131 COL22A1Q8NFW1 1626 aaPredicted RBP24.54■■□□□ 1.52
RPL28-205ENST00000558131 PIK3C2GO75747 1445 aa24.54■■□□□ 1.52
RPL28-205ENST00000558131 MPHOSPH9Q99550 1183 aa24.53■■□□□ 1.52
RPL28-205ENST00000558131 FMN2Q9NZ56 1722 aa24.5■■□□□ 1.51
RPL28-205ENST00000558131 MEX3CQ5U5Q3 659 aaKnown RBP24.5■■□□□ 1.51
RPL28-205ENST00000558131 ANKRD30BQ9BXX2 1392 aa24.49■■□□□ 1.51
RPL28-205ENST00000558131 NRXN1Q9ULB1 1477 aa24.49■■□□□ 1.51
RPL28-205ENST00000558131 ZNF772Q68DY9 489 aaPredicted RBP24.48■■□□□ 1.51
RPL28-205ENST00000558131 LRRC59Q96AG4 307 aaKnown RBP24.48■■□□□ 1.51
RPL28-205ENST00000558131 ORAI2Q96SN7 254 aa24.48■■□□□ 1.51
RPL28-205ENST00000558131 SOS2Q07890 1332 aaPredicted RBP24.47■■□□□ 1.51
RPL28-205ENST00000558131 NUTM2BA6NNL0 878 aaPredicted RBP24.47■■□□□ 1.51
RPL28-205ENST00000558131 NUTM2EB1AL46 878 aaPredicted RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms