RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 ZNF326Q5BKZ1 582 aaKnown RBP24.58■■□□□ 1.53
PBX4-202ENST00000557978 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.58■■□□□ 1.53
PBX4-202ENST00000557978 RIMS2Q9UQ26 1411 aa24.58■■□□□ 1.52
PBX4-202ENST00000557978 ZFYVE9O95405 1425 aa24.57■■□□□ 1.52
PBX4-202ENST00000557978 ANKRD30BQ9BXX2 1392 aa24.54■■□□□ 1.52
PBX4-202ENST00000557978 PPP1R15AO75807 674 aaPredicted RBP24.53■■□□□ 1.52
PBX4-202ENST00000557978 PPLO60437 1756 aa24.53■■□□□ 1.52
PBX4-202ENST00000557978 PCGF6Q9BYE7 350 aa24.52■■□□□ 1.52
PBX4-202ENST00000557978 NEXMIFQ5QGS0 1516 aa24.5■■□□□ 1.51
PBX4-202ENST00000557978 RPGRIP1LQ68CZ1 1315 aa24.49■■□□□ 1.51
PBX4-202ENST00000557978 PLEKHG1Q9ULL1 1385 aa24.48■■□□□ 1.51
PBX4-202ENST00000557978 IFT172Q9UG01 1749 aa24.48■■□□□ 1.51
PBX4-202ENST00000557978 BCANQ96GW7 911 aa24.47■■□□□ 1.51
PBX4-202ENST00000557978 SPATA31E1Q6ZUB1 1445 aa24.46■■□□□ 1.51
PBX4-202ENST00000557978 NUTM2DQ5VT03 806 aaPredicted RBP24.46■■□□□ 1.51
PBX4-202ENST00000557978 RGL3Q3MIN7 710 aa24.44■■□□□ 1.5
PBX4-202ENST00000557978 VGFO15240 615 aaPredicted RBP24.44■■□□□ 1.5
PBX4-202ENST00000557978 DHX57Q6P158 1386 aaKnown RBP24.43■■□□□ 1.5
PBX4-202ENST00000557978 DIP2AQ14689 1571 aa24.41■■□□□ 1.5
PBX4-202ENST00000557978 ZNF335Q9H4Z2 1342 aaPredicted RBP24.4■■□□□ 1.5
PBX4-202ENST00000557978 CHD2O14647 1828 aaKnown RBP24.4■■□□□ 1.5
PBX4-202ENST00000557978 LTBP4Q8N2S1 1624 aa24.4■■□□□ 1.5
PBX4-202ENST00000557978 SETBP1Q9Y6X0 1596 aa24.39■■□□□ 1.5
PBX4-202ENST00000557978 SLC26A8Q96RN1 970 aa24.39■■□□□ 1.5
PBX4-202ENST00000557978 STRCP1A6NGW2 1772 aa24.38■■□□□ 1.49
PBX4-202ENST00000557978 NRXN3Q9Y4C0 1643 aa24.37■■□□□ 1.49
PBX4-202ENST00000557978 TBX22Q9Y458 520 aa24.37■■□□□ 1.49
PBX4-202ENST00000557978 SENP3Q9H4L4 574 aaPredicted RBP24.36■■□□□ 1.49
PBX4-202ENST00000557978 CPS1P31327 1500 aa24.36■■□□□ 1.49
PBX4-202ENST00000557978 ADAMTS13Q76LX8 1427 aa24.35■■□□□ 1.49
PBX4-202ENST00000557978 PIK3R4Q99570 1358 aa24.32■■□□□ 1.48
PBX4-202ENST00000557978 CERKQ8TCT0 537 aa24.31■■□□□ 1.48
PBX4-202ENST00000557978 STAC3Q96MF2 364 aa24.31■■□□□ 1.48
PBX4-202ENST00000557978 SETD1AO15047 1707 aaKnown RBP24.3■■□□□ 1.48
PBX4-202ENST00000557978 MYOM2P54296 1465 aa24.29■■□□□ 1.48
PBX4-202ENST00000557978 KCNA6P17658 529 aa24.29■■□□□ 1.48
PBX4-202ENST00000557978 NWD1Q149M9 1564 aa24.29■■□□□ 1.48
PBX4-202ENST00000557978 ALKQ9UM73 1620 aa24.28■■□□□ 1.48
PBX4-202ENST00000557978 ADGRF5Q8IZF2 1346 aa24.28■■□□□ 1.48
PBX4-202ENST00000557978 IQSEC2Q5JU85 1478 aa24.28■■□□□ 1.48
PBX4-202ENST00000557978 DCAF11Q8TEB1 546 aa24.27■■□□□ 1.48
PBX4-202ENST00000557978 SIN3AQ96ST3 1273 aa24.26■■□□□ 1.47
PBX4-202ENST00000557978 LAMC1P11047 1609 aa24.25■■□□□ 1.47
PBX4-202ENST00000557978 XIRP1Q702N8 1843 aaKnown RBP24.24■■□□□ 1.47
PBX4-202ENST00000557978 PIK3C2GO75747 1445 aa24.24■■□□□ 1.47
PBX4-202ENST00000557978 NKTRP30414 1462 aaKnown RBP24.24■■□□□ 1.47
PBX4-202ENST00000557978 NRXN1Q9ULB1 1477 aa24.24■■□□□ 1.47
PBX4-202ENST00000557978 NEUROD1Q13562 356 aa24.23■■□□□ 1.47
PBX4-202ENST00000557978 KDM2AQ9Y2K7 1162 aa24.22■■□□□ 1.47
PBX4-202ENST00000557978 LRRC7Q96NW7 1537 aa24.21■■□□□ 1.47
PBX4-202ENST00000557978 XRN1Q8IZH2 1706 aaKnown RBP24.2■■□□□ 1.47
PBX4-202ENST00000557978 METP08581 1390 aa24.2■■□□□ 1.46
PBX4-202ENST00000557978 AMOTL2Q9Y2J4 779 aa24.19■■□□□ 1.46
PBX4-202ENST00000557978 PTPRUQ92729 1446 aa24.18■■□□□ 1.46
PBX4-202ENST00000557978 PROSER2Q86WR7 435 aaPredicted RBP24.18■■□□□ 1.46
PBX4-202ENST00000557978 C14orf93Q9H972 538 aaKnown RBP24.17■■□□□ 1.46
PBX4-202ENST00000557978 CLSPNQ9HAW4 1339 aa24.16■■□□□ 1.46
PBX4-202ENST00000557978 KIAA1210Q9ULL0 1709 aa24.15■■□□□ 1.46
PBX4-202ENST00000557978 L3MBTL2Q969R5 705 aa24.13■■□□□ 1.45
PBX4-202ENST00000557978 TMEM94Q12767 1356 aa24.13■■□□□ 1.45
PBX4-202ENST00000557978 CFAP70Q5T0N1 1121 aa24.12■■□□□ 1.45
PBX4-202ENST00000557978 KNDC1Q76NI1 1749 aa24.12■■□□□ 1.45
PBX4-202ENST00000557978 NCOA3Q9Y6Q9 1424 aa24.11■■□□□ 1.45
PBX4-202ENST00000557978 TONSLQ96HA7 1378 aa24.1■■□□□ 1.45
PBX4-202ENST00000557978 ASXL1Q8IXJ9 1541 aa24.09■■□□□ 1.45
PBX4-202ENST00000557978 CCER1Q8TC90 406 aaPredicted RBP24.09■■□□□ 1.45
PBX4-202ENST00000557978 FBXO41Q8TF61 875 aa24.09■■□□□ 1.45
PBX4-202ENST00000557978 PRAG1Q86YV5 1406 aa24.08■■□□□ 1.45
PBX4-202ENST00000557978 TMEM132EQ6IEE7 984 aa24.08■■□□□ 1.44
PBX4-202ENST00000557978 PTCH1Q13635 1447 aa24.07■■□□□ 1.44
PBX4-202ENST00000557978 LRPPRCP42704 1394 aaKnown RBP24.06■■□□□ 1.44
PBX4-202ENST00000557978 TOM1O60784 492 aa24.06■■□□□ 1.44
PBX4-202ENST00000557978 RBM33Q96EV2 1170 aaKnown RBP24.06■■□□□ 1.44
PBX4-202ENST00000557978 YTHDC2Q9H6S0 1430 aaKnown RBP24.06■■□□□ 1.44
PBX4-202ENST00000557978 MSH6P52701 1360 aa24.04■■□□□ 1.44
PBX4-202ENST00000557978 ABCC11Q96J66 1382 aa24.04■■□□□ 1.44
PBX4-202ENST00000557978 UBAP1LF5GYI3 381 aa24.04■■□□□ 1.44
PBX4-202ENST00000557978 C14orf37Q86TY3 774 aa24.04■■□□□ 1.44
PBX4-202ENST00000557978 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.04■■□□□ 1.44
PBX4-202ENST00000557978 ADGRB1O14514 1584 aa24.03■■□□□ 1.44
PBX4-202ENST00000557978 TECPR2O15040 1411 aa24.03■■□□□ 1.44
PBX4-202ENST00000557978 STK26Q9P289 416 aa24.03■■□□□ 1.44
PBX4-202ENST00000557978 TRPM1Q7Z4N2 1603 aa24.02■■□□□ 1.44
PBX4-202ENST00000557978 NALCNQ8IZF0 1738 aa24.01■■□□□ 1.43
PBX4-202ENST00000557978 C19orf44Q9H6X5 657 aa24.01■■□□□ 1.43
PBX4-202ENST00000557978 ROBO2Q9HCK4 1378 aa24■■□□□ 1.43
PBX4-202ENST00000557978 SIRT1Q96EB6 747 aa23.99■■□□□ 1.43
PBX4-202ENST00000557978 TIMELESSQ9UNS1 1208 aa23.99■■□□□ 1.43
PBX4-202ENST00000557978 DLC1Q96QB1 1528 aa23.98■■□□□ 1.43
PBX4-202ENST00000557978 FAM135BQ49AJ0 1406 aa23.97■■□□□ 1.43
PBX4-202ENST00000557978 ADGRL3Q9HAR2 1447 aa23.96■■□□□ 1.43
PBX4-202ENST00000557978 ARHGEF28Q8N1W1 1705 aaKnown RBP23.95■■□□□ 1.43
PBX4-202ENST00000557978 DCCP43146 1447 aa23.95■■□□□ 1.42
PBX4-202ENST00000557978 CADPS2Q86UW7 1296 aa23.95■■□□□ 1.42
PBX4-202ENST00000557978 ATF3P18847 181 aa23.94■■□□□ 1.42
PBX4-202ENST00000557978 TRAK1Q9UPV9 953 aa23.93■■□□□ 1.42
PBX4-202ENST00000557978 NBPF1Q3BBV0 1214 aa23.93■■□□□ 1.42
PBX4-202ENST00000557978 WAPLQ7Z5K2 1190 aa23.93■■□□□ 1.42
PBX4-202ENST00000557978 ILDR1Q86SU0 546 aaPredicted RBP23.92■■□□□ 1.42
PBX4-202ENST00000557978 SCAF1Q9H7N4 1312 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms