RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 NEURL4Q96JN8 1562 aa37.43■■■■□ 3.58
SMAD6-202ENST00000557916 ZFYVE9O95405 1425 aa37.43■■■■□ 3.58
SMAD6-202ENST00000557916 MED14O60244 1454 aa37.4■■■■□ 3.58
SMAD6-202ENST00000557916 NPHP4O75161 1426 aaPredicted RBP37.4■■■■□ 3.58
SMAD6-202ENST00000557916 DHX57Q6P158 1386 aaKnown RBP37.39■■■■□ 3.58
SMAD6-202ENST00000557916 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.39■■■■□ 3.58
SMAD6-202ENST00000557916 PPP1R15AO75807 674 aaPredicted RBP37.36■■■■□ 3.57
SMAD6-202ENST00000557916 NUTM2DQ5VT03 806 aaPredicted RBP37.36■■■■□ 3.57
SMAD6-202ENST00000557916 SPATA31E1Q6ZUB1 1445 aa37.34■■■■□ 3.57
SMAD6-202ENST00000557916 RGL3Q3MIN7 710 aa37.33■■■■□ 3.57
SMAD6-202ENST00000557916 IQGAP1P46940 1657 aa37.31■■■■□ 3.56
SMAD6-202ENST00000557916 RPGRIP1LQ68CZ1 1315 aa37.31■■■■□ 3.56
SMAD6-202ENST00000557916 NEXMIFQ5QGS0 1516 aa37.28■■■■□ 3.56
SMAD6-202ENST00000557916 BCANQ96GW7 911 aa37.27■■■■□ 3.56
SMAD6-202ENST00000557916 PLEKHG1Q9ULL1 1385 aa37.27■■■■□ 3.56
SMAD6-202ENST00000557916 SENP3Q9H4L4 574 aaPredicted RBP37.27■■■■□ 3.56
SMAD6-202ENST00000557916 VGFO15240 615 aaPredicted RBP37.21■■■■□ 3.55
SMAD6-202ENST00000557916 SLC26A8Q96RN1 970 aa37.19■■■■□ 3.54
SMAD6-202ENST00000557916 PPLO60437 1756 aa37.16■■■■□ 3.54
SMAD6-202ENST00000557916 SIN3AQ96ST3 1273 aa37.15■■■■□ 3.54
SMAD6-202ENST00000557916 ZNF335Q9H4Z2 1342 aaPredicted RBP37.14■■■■□ 3.54
SMAD6-202ENST00000557916 ADAMTS13Q76LX8 1427 aa37.1■■■■□ 3.53
SMAD6-202ENST00000557916 TBX22Q9Y458 520 aa37.1■■■■□ 3.53
SMAD6-202ENST00000557916 IFT172Q9UG01 1749 aa37.09■■■■□ 3.53
SMAD6-202ENST00000557916 NEUROD1Q13562 356 aa37.09■■■■□ 3.53
SMAD6-202ENST00000557916 ADGRF5Q8IZF2 1346 aa37.08■■■■□ 3.53
SMAD6-202ENST00000557916 SETBP1Q9Y6X0 1596 aa37.08■■■■□ 3.53
SMAD6-202ENST00000557916 DCAF11Q8TEB1 546 aa37.04■■■■□ 3.52
SMAD6-202ENST00000557916 NRXN3Q9Y4C0 1643 aa37.04■■■■□ 3.52
SMAD6-202ENST00000557916 DIP2AQ14689 1571 aa37.03■■■■□ 3.52
SMAD6-202ENST00000557916 LTBP4Q8N2S1 1624 aa37.02■■■■□ 3.52
SMAD6-202ENST00000557916 MYOM2P54296 1465 aa37.01■■■■□ 3.51
SMAD6-202ENST00000557916 KDM2AQ9Y2K7 1162 aa37.01■■■■□ 3.51
SMAD6-202ENST00000557916 STAC3Q96MF2 364 aa36.98■■■■□ 3.51
SMAD6-202ENST00000557916 KCNA6P17658 529 aa36.97■■■■□ 3.51
SMAD6-202ENST00000557916 PIK3C2GO75747 1445 aa36.95■■■■□ 3.51
SMAD6-202ENST00000557916 NRXN1Q9ULB1 1477 aa36.95■■■■□ 3.51
SMAD6-202ENST00000557916 PIK3R4Q99570 1358 aa36.95■■■■□ 3.5
SMAD6-202ENST00000557916 ALKQ9UM73 1620 aa36.93■■■■□ 3.5
SMAD6-202ENST00000557916 CCER1Q8TC90 406 aaPredicted RBP36.93■■■■□ 3.5
SMAD6-202ENST00000557916 CPS1P31327 1500 aa36.92■■■■□ 3.5
SMAD6-202ENST00000557916 STRCP1A6NGW2 1772 aa36.92■■■■□ 3.5
SMAD6-202ENST00000557916 METP08581 1390 aa36.92■■■■□ 3.5
SMAD6-202ENST00000557916 L3MBTL2Q969R5 705 aa36.92■■■■□ 3.5
SMAD6-202ENST00000557916 CERKQ8TCT0 537 aa36.91■■■■□ 3.5
SMAD6-202ENST00000557916 CLSPNQ9HAW4 1339 aa36.9■■■■□ 3.5
SMAD6-202ENST00000557916 CHD2O14647 1828 aaKnown RBP36.88■■■■□ 3.49
SMAD6-202ENST00000557916 AMOTL2Q9Y2J4 779 aa36.86■■■■□ 3.49
SMAD6-202ENST00000557916 NWD1Q149M9 1564 aa36.86■■■■□ 3.49
SMAD6-202ENST00000557916 PTPRUQ92729 1446 aa36.86■■■■□ 3.49
SMAD6-202ENST00000557916 C14orf93Q9H972 538 aaKnown RBP36.85■■■■□ 3.49
SMAD6-202ENST00000557916 SETD1AO15047 1707 aaKnown RBP36.85■■■■□ 3.49
SMAD6-202ENST00000557916 CFAP70Q5T0N1 1121 aa36.85■■■■□ 3.49
SMAD6-202ENST00000557916 TONSLQ96HA7 1378 aa36.83■■■■□ 3.49
SMAD6-202ENST00000557916 LRRC7Q96NW7 1537 aa36.81■■■■□ 3.48
SMAD6-202ENST00000557916 NKTRP30414 1462 aaKnown RBP36.81■■■■□ 3.48
SMAD6-202ENST00000557916 PROSER2Q86WR7 435 aaPredicted RBP36.8■■■■□ 3.48
SMAD6-202ENST00000557916 TMEM132EQ6IEE7 984 aa36.77■■■■□ 3.48
SMAD6-202ENST00000557916 LAMC1P11047 1609 aa36.76■■■■□ 3.47
SMAD6-202ENST00000557916 PRAG1Q86YV5 1406 aa36.75■■■■□ 3.47
SMAD6-202ENST00000557916 XRN1Q8IZH2 1706 aaKnown RBP36.74■■■■□ 3.47
SMAD6-202ENST00000557916 IQSEC2Q5JU85 1478 aa36.73■■■■□ 3.47
SMAD6-202ENST00000557916 TMEM94Q12767 1356 aa36.73■■■■□ 3.47
SMAD6-202ENST00000557916 ASXL1Q8IXJ9 1541 aa36.72■■■■□ 3.47
SMAD6-202ENST00000557916 RBM33Q96EV2 1170 aaKnown RBP36.72■■■■□ 3.47
SMAD6-202ENST00000557916 STK26Q9P289 416 aa36.69■■■■□ 3.46
SMAD6-202ENST00000557916 LRPPRCP42704 1394 aaKnown RBP36.68■■■■□ 3.46
SMAD6-202ENST00000557916 YTHDC2Q9H6S0 1430 aaKnown RBP36.67■■■■□ 3.46
SMAD6-202ENST00000557916 ABCC11Q96J66 1382 aa36.64■■■■□ 3.46
SMAD6-202ENST00000557916 ADGRB1O14514 1584 aa36.64■■■■□ 3.46
SMAD6-202ENST00000557916 ROBO2Q9HCK4 1378 aa36.63■■■■□ 3.45
SMAD6-202ENST00000557916 PTCH1Q13635 1447 aa36.63■■■■□ 3.45
SMAD6-202ENST00000557916 XIRP1Q702N8 1843 aaKnown RBP36.62■■■■□ 3.45
SMAD6-202ENST00000557916 TIMELESSQ9UNS1 1208 aa36.61■■■■□ 3.45
SMAD6-202ENST00000557916 KIAA1210Q9ULL0 1709 aa36.6■■■■□ 3.45
SMAD6-202ENST00000557916 TECPR2O15040 1411 aa36.6■■■■□ 3.45
SMAD6-202ENST00000557916 NCOA3Q9Y6Q9 1424 aa36.6■■■■□ 3.45
SMAD6-202ENST00000557916 NBPF8Q3BBV2 869 aa36.59■■■■□ 3.45
SMAD6-202ENST00000557916 C14orf37Q86TY3 774 aa36.59■■■■□ 3.45
SMAD6-202ENST00000557916 NBPF1Q3BBV0 1214 aa36.59■■■■□ 3.45
SMAD6-202ENST00000557916 KNDC1Q76NI1 1749 aa36.54■■■■□ 3.44
SMAD6-202ENST00000557916 UBAP1LF5GYI3 381 aa36.54■■■■□ 3.44
SMAD6-202ENST00000557916 MSH6P52701 1360 aa36.54■■■■□ 3.44
SMAD6-202ENST00000557916 TRAK1Q9UPV9 953 aa36.53■■■■□ 3.44
SMAD6-202ENST00000557916 SIRT1Q96EB6 747 aa36.52■■■■□ 3.44
SMAD6-202ENST00000557916 WAPLQ7Z5K2 1190 aa36.51■■■■□ 3.44
SMAD6-202ENST00000557916 C19orf44Q9H6X5 657 aa36.51■■■■□ 3.44
SMAD6-202ENST00000557916 TRPM1Q7Z4N2 1603 aa36.51■■■■□ 3.43
SMAD6-202ENST00000557916 TOM1O60784 492 aa36.5■■■■□ 3.43
SMAD6-202ENST00000557916 FBXO41Q8TF61 875 aa36.5■■■■□ 3.43
SMAD6-202ENST00000557916 FAM135BQ49AJ0 1406 aa36.49■■■■□ 3.43
SMAD6-202ENST00000557916 DLC1Q96QB1 1528 aa36.48■■■■□ 3.43
SMAD6-202ENST00000557916 ROCK2O75116 1388 aaKnown RBP36.47■■■■□ 3.43
SMAD6-202ENST00000557916 PLEKHH1Q9ULM0 1364 aa36.47■■■■□ 3.43
SMAD6-202ENST00000557916 PRAM1Q96QH2 718 aa36.46■■■■□ 3.43
SMAD6-202ENST00000557916 ADGRL3Q9HAR2 1447 aa36.46■■■■□ 3.43
SMAD6-202ENST00000557916 POGKQ9P215 609 aa36.44■■■■□ 3.42
SMAD6-202ENST00000557916 ATF3P18847 181 aa36.42■■■■□ 3.42
SMAD6-202ENST00000557916 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.41■■■■□ 3.42
SMAD6-202ENST00000557916 NALCNQ8IZF0 1738 aa36.4■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms