RNA–Protein interactions for RNA: ENST00000557849.1

INO80-203, Transcript of INO80 complex subunit, humanhuman

TSL 5

Gene INO80, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-203ENST00000557849 APLP2Q06481 763 aa13.53□□□□□ -0.24
INO80-203ENST00000557849 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
INO80-203ENST00000557849 ANKRD50Q9ULJ7 1429 aa13.53□□□□□ -0.24
INO80-203ENST00000557849 NKTRP30414 1462 aaKnown RBP13.52□□□□□ -0.25
INO80-203ENST00000557849 RPRD2Q5VT52 1461 aaKnown RBP13.52□□□□□ -0.25
INO80-203ENST00000557849 UNC13BO14795 1591 aa13.52□□□□□ -0.25
INO80-203ENST00000557849 E9PCH4 1651 aa13.51□□□□□ -0.25
INO80-203ENST00000557849 SLC52A1Q9NWF4 448 aa13.51□□□□□ -0.25
INO80-203ENST00000557849 PROSER2Q86WR7 435 aaPredicted RBP13.5□□□□□ -0.25
INO80-203ENST00000557849 RIMS2Q9UQ26 1411 aa13.48□□□□□ -0.25
INO80-203ENST00000557849 PLEKHG1Q9ULL1 1385 aa13.48□□□□□ -0.25
INO80-203ENST00000557849 FAM50AQ14320 339 aaKnown RBP13.48□□□□□ -0.25
INO80-203ENST00000557849 POTEAQ6S8J7 498 aa13.48□□□□□ -0.25
INO80-203ENST00000557849 PHLPP1O60346 1717 aa13.47□□□□□ -0.25
INO80-203ENST00000557849 ADAMTS13Q76LX8 1427 aa13.47□□□□□ -0.25
INO80-203ENST00000557849 IQGAP3Q86VI3 1631 aa13.46□□□□□ -0.25
INO80-203ENST00000557849 COL16A1Q07092 1604 aaPredicted RBP13.46□□□□□ -0.26
INO80-203ENST00000557849 SLAIN2Q9P270 581 aa13.44□□□□□ -0.26
INO80-203ENST00000557849 SETD1AO15047 1707 aaKnown RBP13.44□□□□□ -0.26
INO80-203ENST00000557849 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.44□□□□□ -0.26
INO80-203ENST00000557849 MSH6P52701 1360 aa13.44□□□□□ -0.26
INO80-203ENST00000557849 NUTM2DQ5VT03 806 aaPredicted RBP13.43□□□□□ -0.26
INO80-203ENST00000557849 PTPRUQ92729 1446 aa13.42□□□□□ -0.26
INO80-203ENST00000557849 BCANQ96GW7 911 aa13.42□□□□□ -0.26
INO80-203ENST00000557849 TBX22Q9Y458 520 aa13.42□□□□□ -0.26
INO80-203ENST00000557849 NRXN3Q9Y4C0 1643 aa13.42□□□□□ -0.26
INO80-203ENST00000557849 LRP6O75581 1613 aa13.41□□□□□ -0.26
INO80-203ENST00000557849 ROCK1Q13464 1354 aa13.41□□□□□ -0.26
INO80-203ENST00000557849 DIP2AQ14689 1571 aa13.41□□□□□ -0.26
INO80-203ENST00000557849 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
INO80-203ENST00000557849 AHDC1Q5TGY3 1603 aaPredicted RBP13.39□□□□□ -0.27
INO80-203ENST00000557849 NCOA3Q9Y6Q9 1424 aa13.39□□□□□ -0.27
INO80-203ENST00000557849 JCADQ9P266 1359 aa13.38□□□□□ -0.27
INO80-203ENST00000557849 CHGAP10645 457 aaKnown RBP13.38□□□□□ -0.27
INO80-203ENST00000557849 XRN1Q8IZH2 1706 aaKnown RBP13.38□□□□□ -0.27
INO80-203ENST00000557849 SPHKAPQ2M3C7 1700 aa13.37□□□□□ -0.27
INO80-203ENST00000557849 SHPRHQ149N8 1683 aa13.37□□□□□ -0.27
INO80-203ENST00000557849 NUP155O75694 1391 aa13.36□□□□□ -0.27
INO80-203ENST00000557849 PIK3R4Q99570 1358 aa13.36□□□□□ -0.27
INO80-203ENST00000557849 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.36□□□□□ -0.27
INO80-203ENST00000557849 TRPM2O94759 1503 aa13.35□□□□□ -0.27
INO80-203ENST00000557849 HDGFP51858 240 aaKnown RBP13.35□□□□□ -0.27
INO80-203ENST00000557849 SETBP1Q9Y6X0 1596 aa13.35□□□□□ -0.27
INO80-203ENST00000557849 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
INO80-203ENST00000557849 PPARGC1BQ86YN6 1023 aaKnown RBP13.33□□□□□ -0.28
INO80-203ENST00000557849 AMOTL2Q9Y2J4 779 aa13.33□□□□□ -0.28
INO80-203ENST00000557849 CLTCL1P53675 1640 aa13.32□□□□□ -0.28
INO80-203ENST00000557849 ITGAEP38570 1179 aa13.32□□□□□ -0.28
INO80-203ENST00000557849 BRINP3Q76B58 766 aa13.32□□□□□ -0.28
INO80-203ENST00000557849 METP08581 1390 aa13.32□□□□□ -0.28
INO80-203ENST00000557849 NHSL1Q5SYE7 1610 aa13.31□□□□□ -0.28
INO80-203ENST00000557849 C14orf37Q86TY3 774 aa13.31□□□□□ -0.28
INO80-203ENST00000557849 CADPS2Q86UW7 1296 aa13.31□□□□□ -0.28
INO80-203ENST00000557849 NALCNQ8IZF0 1738 aa13.3□□□□□ -0.28
INO80-203ENST00000557849 NEXMIFQ5QGS0 1516 aa13.3□□□□□ -0.28
INO80-203ENST00000557849 ASXL1Q8IXJ9 1541 aa13.3□□□□□ -0.28
INO80-203ENST00000557849 SPATA31A6Q5VVP1 1343 aa13.3□□□□□ -0.28
INO80-203ENST00000557849 MST1RQ04912 1400 aa13.3□□□□□ -0.28
INO80-203ENST00000557849 ATF3P18847 181 aa13.29□□□□□ -0.28
INO80-203ENST00000557849 DCCP43146 1447 aa13.29□□□□□ -0.28
INO80-203ENST00000557849 SRCAPQ6ZRS2 3230 aa13.27□□□□□ -0.28
INO80-203ENST00000557849 KIF1BO60333 1816 aa13.26□□□□□ -0.29
INO80-203ENST00000557849 DDX17Q92841 729 aaKnown RBP13.26□□□□□ -0.29
INO80-203ENST00000557849 SETD5Q9C0A6 1442 aa13.26□□□□□ -0.29
INO80-203ENST00000557849 NAIPQ13075 1403 aa13.24□□□□□ -0.29
INO80-203ENST00000557849 ADGRL3Q9HAR2 1447 aa13.24□□□□□ -0.29
INO80-203ENST00000557849 UPF1Q92900 1129 aaKnown RBP eCLIP13.24□□□□□ -0.29
INO80-203ENST00000557849 RRBP1Q9P2E9 1410 aaKnown RBP13.23□□□□□ -0.29
INO80-203ENST00000557849 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
INO80-203ENST00000557849 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
INO80-203ENST00000557849 ZNF326Q5BKZ1 582 aaKnown RBP13.23□□□□□ -0.29
INO80-203ENST00000557849 MEX3CQ5U5Q3 659 aaKnown RBP13.23□□□□□ -0.29
INO80-203ENST00000557849 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
INO80-203ENST00000557849 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
INO80-203ENST00000557849 LAMC1P11047 1609 aa13.23□□□□□ -0.29
INO80-203ENST00000557849 ZNF772Q68DY9 489 aaPredicted RBP13.22□□□□□ -0.29
INO80-203ENST00000557849 EP400Q96L91 3159 aa13.22□□□□□ -0.29
INO80-203ENST00000557849 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
INO80-203ENST00000557849 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
INO80-203ENST00000557849 PPLO60437 1756 aa13.2□□□□□ -0.3
INO80-203ENST00000557849 AFF2P51816 1311 aa13.2□□□□□ -0.3
INO80-203ENST00000557849 C1orf167Q5SNV9 1468 aa13.2□□□□□ -0.3
INO80-203ENST00000557849 CDK12Q9NYV4 1490 aaPredicted RBP13.19□□□□□ -0.3
INO80-203ENST00000557849 PTCH1Q13635 1447 aa13.19□□□□□ -0.3
INO80-203ENST00000557849 RXRBP28702 533 aa13.18□□□□□ -0.3
INO80-203ENST00000557849 PRAG1Q86YV5 1406 aa13.18□□□□□ -0.3
INO80-203ENST00000557849 RGS12O14924 1447 aa13.17□□□□□ -0.3
INO80-203ENST00000557849 LRRC59Q96AG4 307 aaKnown RBP13.17□□□□□ -0.3
INO80-203ENST00000557849 ORAI2Q96SN7 254 aa13.16□□□□□ -0.3
INO80-203ENST00000557849 C8orf37Q96NL8 207 aa13.15□□□□□ -0.3
INO80-203ENST00000557849 SOS2Q07890 1332 aaPredicted RBP13.14□□□□□ -0.31
INO80-203ENST00000557849 HFM1A2PYH4 1435 aa13.14□□□□□ -0.31
INO80-203ENST00000557849 COL22A1Q8NFW1 1626 aaPredicted RBP13.13□□□□□ -0.31
INO80-203ENST00000557849 QTRT2Q9H974 415 aaKnown RBP13.13□□□□□ -0.31
INO80-203ENST00000557849 IFT172Q9UG01 1749 aa13.13□□□□□ -0.31
INO80-203ENST00000557849 VGFO15240 615 aaPredicted RBP13.11□□□□□ -0.31
INO80-203ENST00000557849 ADAMTS2O95450 1211 aa13.11□□□□□ -0.31
INO80-203ENST00000557849 RBM6P78332 1123 aaKnown RBP13.11□□□□□ -0.31
INO80-203ENST00000557849 FOXD1Q16676 465 aa13.11□□□□□ -0.31
INO80-203ENST00000557849 CDC42BPGQ6DT37 1551 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms