RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 RIMS2Q9UQ26 1411 aa25.14■■□□□ 1.62
NEDD4-212ENST00000557845 BCANQ96GW7 911 aa25.14■■□□□ 1.62
NEDD4-212ENST00000557845 SPHKAPQ2M3C7 1700 aa25.13■■□□□ 1.61
NEDD4-212ENST00000557845 PPP1R15AO75807 674 aaPredicted RBP25.12■■□□□ 1.61
NEDD4-212ENST00000557845 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.12■■□□□ 1.61
NEDD4-212ENST00000557845 PLEKHG1Q9ULL1 1385 aa25.1■■□□□ 1.61
NEDD4-212ENST00000557845 KCNA6P17658 529 aa25.09■■□□□ 1.61
NEDD4-212ENST00000557845 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
NEDD4-212ENST00000557845 PIP4K2BP78356 416 aa25.08■■□□□ 1.61
NEDD4-212ENST00000557845 NUTM2DQ5VT03 806 aaPredicted RBP25.08■■□□□ 1.61
NEDD4-212ENST00000557845 SCAF1Q9H7N4 1312 aaKnown RBP25.06■■□□□ 1.6
NEDD4-212ENST00000557845 SLC4A1APQ9BWU0 796 aaKnown RBP25.05■■□□□ 1.6
NEDD4-212ENST00000557845 XIRP1Q702N8 1843 aaKnown RBP25.04■■□□□ 1.6
NEDD4-212ENST00000557845 TBX22Q9Y458 520 aa25.03■■□□□ 1.6
NEDD4-212ENST00000557845 ALKQ9UM73 1620 aa25.03■■□□□ 1.6
NEDD4-212ENST00000557845 ZNF326Q5BKZ1 582 aaKnown RBP25.01■■□□□ 1.59
NEDD4-212ENST00000557845 PROSER2Q86WR7 435 aaPredicted RBP25.01■■□□□ 1.59
NEDD4-212ENST00000557845 TRPM2O94759 1503 aa25.01■■□□□ 1.59
NEDD4-212ENST00000557845 CLTCL1P53675 1640 aa25.01■■□□□ 1.59
NEDD4-212ENST00000557845 CHD2O14647 1828 aaKnown RBP25■■□□□ 1.59
NEDD4-212ENST00000557845 TMEM94Q12767 1356 aa24.98■■□□□ 1.59
NEDD4-212ENST00000557845 KIF1BO60333 1816 aa24.98■■□□□ 1.59
NEDD4-212ENST00000557845 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
NEDD4-212ENST00000557845 ADAMTS13Q76LX8 1427 aa24.97■■□□□ 1.59
NEDD4-212ENST00000557845 HSPA1LP34931 641 aa24.96■■□□□ 1.59
NEDD4-212ENST00000557845 RBM33Q96EV2 1170 aaKnown RBP24.96■■□□□ 1.59
NEDD4-212ENST00000557845 NKTRP30414 1462 aaKnown RBP24.95■■□□□ 1.58
NEDD4-212ENST00000557845 MPHOSPH9Q99550 1183 aa24.94■■□□□ 1.58
NEDD4-212ENST00000557845 FOXD1Q16676 465 aa24.93■■□□□ 1.58
NEDD4-212ENST00000557845 DIP2AQ14689 1571 aa24.93■■□□□ 1.58
NEDD4-212ENST00000557845 ACIN1Q9UKV3 1341 aaKnown RBP24.91■■□□□ 1.58
NEDD4-212ENST00000557845 SETD5Q9C0A6 1442 aa24.91■■□□□ 1.58
NEDD4-212ENST00000557845 PIK3R4Q99570 1358 aa24.91■■□□□ 1.58
NEDD4-212ENST00000557845 NEXMIFQ5QGS0 1516 aa24.89■■□□□ 1.57
NEDD4-212ENST00000557845 NRXN3Q9Y4C0 1643 aa24.87■■□□□ 1.57
NEDD4-212ENST00000557845 SETBP1Q9Y6X0 1596 aa24.87■■□□□ 1.57
NEDD4-212ENST00000557845 DISP3Q9P2K9 1392 aa24.86■■□□□ 1.57
NEDD4-212ENST00000557845 AMOTL2Q9Y2J4 779 aa24.86■■□□□ 1.57
NEDD4-212ENST00000557845 RPGRIP1LQ68CZ1 1315 aa24.85■■□□□ 1.57
NEDD4-212ENST00000557845 MSH6P52701 1360 aa24.84■■□□□ 1.57
NEDD4-212ENST00000557845 VGFO15240 615 aaPredicted RBP24.84■■□□□ 1.57
NEDD4-212ENST00000557845 PTPRUQ92729 1446 aa24.84■■□□□ 1.57
NEDD4-212ENST00000557845 NCOA3Q9Y6Q9 1424 aa24.83■■□□□ 1.57
NEDD4-212ENST00000557845 RAB3GAP2Q9H2M9 1393 aa24.81■■□□□ 1.56
NEDD4-212ENST00000557845 FAM135BQ49AJ0 1406 aa24.81■■□□□ 1.56
NEDD4-212ENST00000557845 METP08581 1390 aa24.8■■□□□ 1.56
NEDD4-212ENST00000557845 CCDC144AA2RUR9 1427 aa24.79■■□□□ 1.56
NEDD4-212ENST00000557845 C14orf37Q86TY3 774 aa24.78■■□□□ 1.56
NEDD4-212ENST00000557845 SLAIN2Q9P270 581 aa24.78■■□□□ 1.56
NEDD4-212ENST00000557845 PPLO60437 1756 aa24.77■■□□□ 1.56
NEDD4-212ENST00000557845 C19orf44Q9H6X5 657 aa24.76■■□□□ 1.55
NEDD4-212ENST00000557845 RGL3Q3MIN7 710 aa24.75■■□□□ 1.55
NEDD4-212ENST00000557845 XRN1Q8IZH2 1706 aaKnown RBP24.75■■□□□ 1.55
NEDD4-212ENST00000557845 ROBO1Q9Y6N7 1651 aa24.74■■□□□ 1.55
NEDD4-212ENST00000557845 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.72■■□□□ 1.55
NEDD4-212ENST00000557845 SPATA31E1Q6ZUB1 1445 aa24.72■■□□□ 1.55
NEDD4-212ENST00000557845 HRCP23327 699 aa24.71■■□□□ 1.55
NEDD4-212ENST00000557845 CADPS2Q86UW7 1296 aa24.71■■□□□ 1.55
NEDD4-212ENST00000557845 ATF3P18847 181 aa24.7■■□□□ 1.54
NEDD4-212ENST00000557845 SETD1AO15047 1707 aaKnown RBP24.69■■□□□ 1.54
NEDD4-212ENST00000557845 ILDR2Q71H61 639 aa24.69■■□□□ 1.54
NEDD4-212ENST00000557845 ADGRF5Q8IZF2 1346 aa24.67■■□□□ 1.54
NEDD4-212ENST00000557845 MED1Q15648 1581 aaPredicted RBP24.67■■□□□ 1.54
NEDD4-212ENST00000557845 ANKRD30BQ9BXX2 1392 aa24.66■■□□□ 1.54
NEDD4-212ENST00000557845 IFT172Q9UG01 1749 aa24.65■■□□□ 1.54
NEDD4-212ENST00000557845 DCCP43146 1447 aa24.61■■□□□ 1.53
NEDD4-212ENST00000557845 PHLPP1O60346 1717 aa24.6■■□□□ 1.53
NEDD4-212ENST00000557845 ROBO2Q9HCK4 1378 aa24.58■■□□□ 1.53
NEDD4-212ENST00000557845 PTCH1Q13635 1447 aa24.58■■□□□ 1.53
NEDD4-212ENST00000557845 ADGRL3Q9HAR2 1447 aa24.57■■□□□ 1.52
NEDD4-212ENST00000557845 PRAG1Q86YV5 1406 aa24.56■■□□□ 1.52
NEDD4-212ENST00000557845 NALCNQ8IZF0 1738 aa24.55■■□□□ 1.52
NEDD4-212ENST00000557845 BRINP3Q76B58 766 aa24.55■■□□□ 1.52
NEDD4-212ENST00000557845 PIK3C2GO75747 1445 aa24.54■■□□□ 1.52
NEDD4-212ENST00000557845 MST1RQ04912 1400 aa24.54■■□□□ 1.52
NEDD4-212ENST00000557845 PHF23Q9BUL5 403 aaPredicted RBP24.54■■□□□ 1.52
NEDD4-212ENST00000557845 TMEM132EQ6IEE7 984 aa24.53■■□□□ 1.52
NEDD4-212ENST00000557845 C14orf93Q9H972 538 aaKnown RBP24.51■■□□□ 1.51
NEDD4-212ENST00000557845 STK26Q9P289 416 aa24.51■■□□□ 1.51
NEDD4-212ENST00000557845 COL16A1Q07092 1604 aaPredicted RBP24.5■■□□□ 1.51
NEDD4-212ENST00000557845 AHDC1Q5TGY3 1603 aaPredicted RBP24.5■■□□□ 1.51
NEDD4-212ENST00000557845 LRPPRCP42704 1394 aaKnown RBP24.49■■□□□ 1.51
NEDD4-212ENST00000557845 JCADQ9P266 1359 aa24.49■■□□□ 1.51
NEDD4-212ENST00000557845 MYOM2P54296 1465 aa24.49■■□□□ 1.51
NEDD4-212ENST00000557845 NRXN1Q9ULB1 1477 aa24.49■■□□□ 1.51
NEDD4-212ENST00000557845 CFAP70Q5T0N1 1121 aa24.48■■□□□ 1.51
NEDD4-212ENST00000557845 ABCC11Q96J66 1382 aa24.48■■□□□ 1.51
NEDD4-212ENST00000557845 ASXL1Q8IXJ9 1541 aa24.47■■□□□ 1.51
NEDD4-212ENST00000557845 TECPR2O15040 1411 aa24.46■■□□□ 1.51
NEDD4-212ENST00000557845 WAPLQ7Z5K2 1190 aa24.46■■□□□ 1.51
NEDD4-212ENST00000557845 SOCS7O14512 581 aa24.45■■□□□ 1.5
NEDD4-212ENST00000557845 C1orf167Q5SNV9 1468 aa24.45■■□□□ 1.5
NEDD4-212ENST00000557845 YTHDC2Q9H6S0 1430 aaKnown RBP24.44■■□□□ 1.5
NEDD4-212ENST00000557845 DCAF11Q8TEB1 546 aa24.44■■□□□ 1.5
NEDD4-212ENST00000557845 RGS17Q9UGC6 210 aaPredicted RBP24.43■■□□□ 1.5
NEDD4-212ENST00000557845 KDM2AQ9Y2K7 1162 aa24.43■■□□□ 1.5
NEDD4-212ENST00000557845 KNDC1Q76NI1 1749 aa24.43■■□□□ 1.5
NEDD4-212ENST00000557845 SIRT1Q96EB6 747 aa24.42■■□□□ 1.5
NEDD4-212ENST00000557845 STAC3Q96MF2 364 aa24.42■■□□□ 1.5
NEDD4-212ENST00000557845 LAMC1P11047 1609 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms