RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 CPS1P31327 1500 aa29.38■■■□□ 2.29
HIF1A-211ENST00000557446 STRCP1A6NGW2 1772 aa29.38■■■□□ 2.29
HIF1A-211ENST00000557446 FOXD1Q16676 465 aa29.37■■■□□ 2.29
HIF1A-211ENST00000557446 ILDR1Q86SU0 546 aaPredicted RBP29.37■■■□□ 2.29
HIF1A-211ENST00000557446 IQSEC2Q5JU85 1478 aa29.36■■■□□ 2.29
HIF1A-211ENST00000557446 FBXO41Q8TF61 875 aa29.36■■■□□ 2.29
HIF1A-211ENST00000557446 PPP1R15AO75807 674 aaPredicted RBP29.34■■■□□ 2.29
HIF1A-211ENST00000557446 HDGFP51858 240 aaKnown RBP29.34■■■□□ 2.29
HIF1A-211ENST00000557446 PLEKHG1Q9ULL1 1385 aa29.34■■■□□ 2.29
HIF1A-211ENST00000557446 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.32■■■□□ 2.28
HIF1A-211ENST00000557446 NUTM2DQ5VT03 806 aaPredicted RBP29.3■■■□□ 2.28
HIF1A-211ENST00000557446 ZNF326Q5BKZ1 582 aaKnown RBP29.29■■■□□ 2.28
HIF1A-211ENST00000557446 BCANQ96GW7 911 aa29.29■■■□□ 2.28
HIF1A-211ENST00000557446 NEXMIFQ5QGS0 1516 aa29.29■■■□□ 2.28
HIF1A-211ENST00000557446 CCDC144AA2RUR9 1427 aa29.28■■■□□ 2.28
HIF1A-211ENST00000557446 SENP3Q9H4L4 574 aaPredicted RBP29.28■■■□□ 2.28
HIF1A-211ENST00000557446 SLC26A8Q96RN1 970 aa29.27■■■□□ 2.28
HIF1A-211ENST00000557446 HRCP23327 699 aa29.25■■■□□ 2.27
HIF1A-211ENST00000557446 DIP2AQ14689 1571 aa29.25■■■□□ 2.27
HIF1A-211ENST00000557446 NWD1Q149M9 1564 aa29.22■■■□□ 2.27
HIF1A-211ENST00000557446 PPLO60437 1756 aa29.21■■■□□ 2.27
HIF1A-211ENST00000557446 ADAMTS13Q76LX8 1427 aa29.21■■■□□ 2.27
HIF1A-211ENST00000557446 LRRC7Q96NW7 1537 aa29.21■■■□□ 2.27
HIF1A-211ENST00000557446 NRXN3Q9Y4C0 1643 aa29.21■■■□□ 2.27
HIF1A-211ENST00000557446 SETBP1Q9Y6X0 1596 aa29.2■■■□□ 2.26
HIF1A-211ENST00000557446 CHD2O14647 1828 aaKnown RBP29.19■■■□□ 2.26
HIF1A-211ENST00000557446 XIRP1Q702N8 1843 aaKnown RBP29.16■■■□□ 2.26
HIF1A-211ENST00000557446 SPATA31E1Q6ZUB1 1445 aa29.15■■■□□ 2.26
HIF1A-211ENST00000557446 NKTRP30414 1462 aaKnown RBP29.15■■■□□ 2.26
HIF1A-211ENST00000557446 IFT172Q9UG01 1749 aa29.14■■■□□ 2.26
HIF1A-211ENST00000557446 KCNA6P17658 529 aa29.14■■■□□ 2.26
HIF1A-211ENST00000557446 TBX22Q9Y458 520 aa29.14■■■□□ 2.26
HIF1A-211ENST00000557446 RPGRIP1LQ68CZ1 1315 aa29.12■■■□□ 2.25
HIF1A-211ENST00000557446 UBAP1LF5GYI3 381 aa29.09■■■□□ 2.25
HIF1A-211ENST00000557446 PIK3R4Q99570 1358 aa29.09■■■□□ 2.25
HIF1A-211ENST00000557446 ANKRD30BQ9BXX2 1392 aa29.09■■■□□ 2.25
HIF1A-211ENST00000557446 VGFO15240 615 aaPredicted RBP29.07■■■□□ 2.24
HIF1A-211ENST00000557446 RGL3Q3MIN7 710 aa29.07■■■□□ 2.24
HIF1A-211ENST00000557446 SETD1AO15047 1707 aaKnown RBP29.06■■■□□ 2.24
HIF1A-211ENST00000557446 TMEM94Q12767 1356 aa29.04■■■□□ 2.24
HIF1A-211ENST00000557446 XRN1Q8IZH2 1706 aaKnown RBP29.04■■■□□ 2.24
HIF1A-211ENST00000557446 ALKQ9UM73 1620 aa29.03■■■□□ 2.24
HIF1A-211ENST00000557446 TRIM26Q12899 539 aaPredicted RBP29.02■■■□□ 2.24
HIF1A-211ENST00000557446 PROSER2Q86WR7 435 aaPredicted RBP29.02■■■□□ 2.24
HIF1A-211ENST00000557446 PTPRUQ92729 1446 aa29.02■■■□□ 2.24
HIF1A-211ENST00000557446 TOM1O60784 492 aa29■■■□□ 2.23
HIF1A-211ENST00000557446 METP08581 1390 aa29■■■□□ 2.23
HIF1A-211ENST00000557446 RBM33Q96EV2 1170 aaKnown RBP28.98■■■□□ 2.23
HIF1A-211ENST00000557446 ADGRF5Q8IZF2 1346 aa28.96■■■□□ 2.23
HIF1A-211ENST00000557446 AMOTL2Q9Y2J4 779 aa28.96■■■□□ 2.23
HIF1A-211ENST00000557446 MYOM2P54296 1465 aa28.94■■■□□ 2.22
HIF1A-211ENST00000557446 SCAF1Q9H7N4 1312 aaKnown RBP28.94■■■□□ 2.22
HIF1A-211ENST00000557446 PIP4K2BP78356 416 aa28.92■■■□□ 2.22
HIF1A-211ENST00000557446 PIK3C2GO75747 1445 aa28.92■■■□□ 2.22
HIF1A-211ENST00000557446 MSH6P52701 1360 aa28.9■■■□□ 2.22
HIF1A-211ENST00000557446 NCOA3Q9Y6Q9 1424 aa28.89■■■□□ 2.22
HIF1A-211ENST00000557446 LAMC1P11047 1609 aa28.88■■■□□ 2.21
HIF1A-211ENST00000557446 NRXN1Q9ULB1 1477 aa28.88■■■□□ 2.21
HIF1A-211ENST00000557446 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.86■■■□□ 2.21
HIF1A-211ENST00000557446 ASXL1Q8IXJ9 1541 aa28.85■■■□□ 2.21
HIF1A-211ENST00000557446 C14orf37Q86TY3 774 aa28.84■■■□□ 2.21
HIF1A-211ENST00000557446 PTCH1Q13635 1447 aa28.84■■■□□ 2.21
HIF1A-211ENST00000557446 PRAG1Q86YV5 1406 aa28.83■■■□□ 2.21
HIF1A-211ENST00000557446 NALCNQ8IZF0 1738 aa28.82■■■□□ 2.2
HIF1A-211ENST00000557446 KNDC1Q76NI1 1749 aa28.8■■■□□ 2.2
HIF1A-211ENST00000557446 DHX57Q6P158 1386 aaKnown RBP28.8■■■□□ 2.2
HIF1A-211ENST00000557446 ROBO1Q9Y6N7 1651 aa28.78■■■□□ 2.2
HIF1A-211ENST00000557446 ROBO2Q9HCK4 1378 aa28.77■■■□□ 2.2
HIF1A-211ENST00000557446 DCAF11Q8TEB1 546 aa28.77■■■□□ 2.2
HIF1A-211ENST00000557446 ADGRL3Q9HAR2 1447 aa28.76■■■□□ 2.19
HIF1A-211ENST00000557446 C19orf44Q9H6X5 657 aa28.75■■■□□ 2.19
HIF1A-211ENST00000557446 KDM2AQ9Y2K7 1162 aa28.75■■■□□ 2.19
HIF1A-211ENST00000557446 DCCP43146 1447 aa28.75■■■□□ 2.19
HIF1A-211ENST00000557446 HSPA1LP34931 641 aa28.74■■■□□ 2.19
HIF1A-211ENST00000557446 C14orf93Q9H972 538 aaKnown RBP28.74■■■□□ 2.19
HIF1A-211ENST00000557446 LRPPRCP42704 1394 aaKnown RBP28.74■■■□□ 2.19
HIF1A-211ENST00000557446 TECPR2O15040 1411 aa28.73■■■□□ 2.19
HIF1A-211ENST00000557446 CFAP70Q5T0N1 1121 aa28.73■■■□□ 2.19
HIF1A-211ENST00000557446 FAM135BQ49AJ0 1406 aa28.72■■■□□ 2.19
HIF1A-211ENST00000557446 TMEM132EQ6IEE7 984 aa28.72■■■□□ 2.19
HIF1A-211ENST00000557446 YTHDC2Q9H6S0 1430 aaKnown RBP28.71■■■□□ 2.19
HIF1A-211ENST00000557446 CADPS2Q86UW7 1296 aa28.71■■■□□ 2.19
HIF1A-211ENST00000557446 STAC3Q96MF2 364 aa28.71■■■□□ 2.19
HIF1A-211ENST00000557446 ATF3P18847 181 aa28.7■■■□□ 2.18
HIF1A-211ENST00000557446 STK26Q9P289 416 aa28.7■■■□□ 2.18
HIF1A-211ENST00000557446 SLAIN2Q9P270 581 aa28.69■■■□□ 2.18
HIF1A-211ENST00000557446 ADGRB1O14514 1584 aa28.68■■■□□ 2.18
HIF1A-211ENST00000557446 ABCC11Q96J66 1382 aa28.68■■■□□ 2.18
HIF1A-211ENST00000557446 SIN3AQ96ST3 1273 aa28.66■■■□□ 2.18
HIF1A-211ENST00000557446 MST1RQ04912 1400 aa28.63■■■□□ 2.17
HIF1A-211ENST00000557446 KIAA1210Q9ULL0 1709 aa28.62■■■□□ 2.17
HIF1A-211ENST00000557446 CDC42BPGQ6DT37 1551 aa28.62■■■□□ 2.17
HIF1A-211ENST00000557446 PHLPP1O60346 1717 aa28.6■■■□□ 2.17
HIF1A-211ENST00000557446 DLC1Q96QB1 1528 aa28.6■■■□□ 2.17
HIF1A-211ENST00000557446 NEUROD1Q13562 356 aa28.6■■■□□ 2.17
HIF1A-211ENST00000557446 PLEKHH1Q9ULM0 1364 aa28.6■■■□□ 2.17
HIF1A-211ENST00000557446 WAPLQ7Z5K2 1190 aa28.59■■■□□ 2.17
HIF1A-211ENST00000557446 PCGF6Q9BYE7 350 aa28.56■■■□□ 2.16
HIF1A-211ENST00000557446 AHDC1Q5TGY3 1603 aaPredicted RBP28.55■■■□□ 2.16
HIF1A-211ENST00000557446 L3MBTL2Q969R5 705 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms