RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 SCAF1Q9H7N4 1312 aaKnown RBP31.58■■■□□ 2.65
FOXA1-205ENST00000557418 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.58■■■□□ 2.65
FOXA1-205ENST00000557418 RIMS2Q9UQ26 1411 aa31.58■■■□□ 2.65
FOXA1-205ENST00000557418 PIP4K2BP78356 416 aa31.57■■■□□ 2.64
FOXA1-205ENST00000557418 LRRC7Q96NW7 1537 aa31.57■■■□□ 2.64
FOXA1-205ENST00000557418 HFM1A2PYH4 1435 aa31.57■■■□□ 2.64
FOXA1-205ENST00000557418 SENP3Q9H4L4 574 aaPredicted RBP31.55■■■□□ 2.64
FOXA1-205ENST00000557418 KCNA6P17658 529 aa31.54■■■□□ 2.64
FOXA1-205ENST00000557418 ZFYVE9O95405 1425 aa31.54■■■□□ 2.64
FOXA1-205ENST00000557418 NUTM2DQ5VT03 806 aaPredicted RBP31.5■■■□□ 2.63
FOXA1-205ENST00000557418 PLEKHG1Q9ULL1 1385 aa31.5■■■□□ 2.63
FOXA1-205ENST00000557418 SPHKAPQ2M3C7 1700 aa31.47■■■□□ 2.63
FOXA1-205ENST00000557418 PROSER2Q86WR7 435 aaPredicted RBP31.46■■■□□ 2.63
FOXA1-205ENST00000557418 SLC4A1APQ9BWU0 796 aaKnown RBP31.46■■■□□ 2.63
FOXA1-205ENST00000557418 TBX22Q9Y458 520 aa31.45■■■□□ 2.63
FOXA1-205ENST00000557418 ZNF326Q5BKZ1 582 aaKnown RBP31.44■■■□□ 2.62
FOXA1-205ENST00000557418 HSPA1LP34931 641 aa31.4■■■□□ 2.62
FOXA1-205ENST00000557418 TMEM94Q12767 1356 aa31.38■■■□□ 2.61
FOXA1-205ENST00000557418 RBM33Q96EV2 1170 aaKnown RBP31.37■■■□□ 2.61
FOXA1-205ENST00000557418 XIRP1Q702N8 1843 aaKnown RBP31.36■■■□□ 2.61
FOXA1-205ENST00000557418 ALKQ9UM73 1620 aa31.35■■■□□ 2.61
FOXA1-205ENST00000557418 TRPM2O94759 1503 aa31.34■■■□□ 2.61
FOXA1-205ENST00000557418 DISP3Q9P2K9 1392 aa31.33■■■□□ 2.61
FOXA1-205ENST00000557418 CHD2O14647 1828 aaKnown RBP31.33■■■□□ 2.61
FOXA1-205ENST00000557418 ADAMTS13Q76LX8 1427 aa31.32■■■□□ 2.6
FOXA1-205ENST00000557418 CLTCL1P53675 1640 aa31.31■■■□□ 2.6
FOXA1-205ENST00000557418 NKTRP30414 1462 aaKnown RBP31.31■■■□□ 2.6
FOXA1-205ENST00000557418 KIF1BO60333 1816 aa31.3■■■□□ 2.6
FOXA1-205ENST00000557418 NWD1Q149M9 1564 aa31.3■■■□□ 2.6
FOXA1-205ENST00000557418 PCGF6Q9BYE7 350 aa31.29■■■□□ 2.6
FOXA1-205ENST00000557418 MPHOSPH9Q99550 1183 aa31.28■■■□□ 2.6
FOXA1-205ENST00000557418 SETD5Q9C0A6 1442 aa31.28■■■□□ 2.6
FOXA1-205ENST00000557418 PIK3R4Q99570 1358 aa31.28■■■□□ 2.6
FOXA1-205ENST00000557418 ACIN1Q9UKV3 1341 aaKnown RBP31.27■■■□□ 2.6
FOXA1-205ENST00000557418 FOXD1Q16676 465 aa31.27■■■□□ 2.6
FOXA1-205ENST00000557418 DIP2AQ14689 1571 aa31.26■■■□□ 2.59
FOXA1-205ENST00000557418 AMOTL2Q9Y2J4 779 aa31.24■■■□□ 2.59
FOXA1-205ENST00000557418 MSH6P52701 1360 aa31.23■■■□□ 2.59
FOXA1-205ENST00000557418 C14orf37Q86TY3 774 aa31.21■■■□□ 2.59
FOXA1-205ENST00000557418 VGFO15240 615 aaPredicted RBP31.2■■■□□ 2.59
FOXA1-205ENST00000557418 RAB3GAP2Q9H2M9 1393 aa31.19■■■□□ 2.58
FOXA1-205ENST00000557418 RPGRIP1LQ68CZ1 1315 aa31.19■■■□□ 2.58
FOXA1-205ENST00000557418 NEXMIFQ5QGS0 1516 aa31.18■■■□□ 2.58
FOXA1-205ENST00000557418 SETBP1Q9Y6X0 1596 aa31.17■■■□□ 2.58
FOXA1-205ENST00000557418 FAM135BQ49AJ0 1406 aa31.16■■■□□ 2.58
FOXA1-205ENST00000557418 NCOA3Q9Y6Q9 1424 aa31.16■■■□□ 2.58
FOXA1-205ENST00000557418 SLAIN2Q9P270 581 aa31.15■■■□□ 2.58
FOXA1-205ENST00000557418 PTPRUQ92729 1446 aa31.14■■■□□ 2.58
FOXA1-205ENST00000557418 NRXN3Q9Y4C0 1643 aa31.13■■■□□ 2.57
FOXA1-205ENST00000557418 HRCP23327 699 aa31.12■■■□□ 2.57
FOXA1-205ENST00000557418 C19orf44Q9H6X5 657 aa31.12■■■□□ 2.57
FOXA1-205ENST00000557418 CCDC144AA2RUR9 1427 aa31.12■■■□□ 2.57
FOXA1-205ENST00000557418 METP08581 1390 aa31.11■■■□□ 2.57
FOXA1-205ENST00000557418 RGL3Q3MIN7 710 aa31.09■■■□□ 2.57
FOXA1-205ENST00000557418 ATF3P18847 181 aa31.08■■■□□ 2.57
FOXA1-205ENST00000557418 CADPS2Q86UW7 1296 aa31.08■■■□□ 2.57
FOXA1-205ENST00000557418 ILDR2Q71H61 639 aa31.05■■■□□ 2.56
FOXA1-205ENST00000557418 ROBO1Q9Y6N7 1651 aa31.03■■■□□ 2.56
FOXA1-205ENST00000557418 PPLO60437 1756 aa31.01■■■□□ 2.55
FOXA1-205ENST00000557418 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.01■■■□□ 2.55
FOXA1-205ENST00000557418 XRN1Q8IZH2 1706 aaKnown RBP31■■■□□ 2.55
FOXA1-205ENST00000557418 MED1Q15648 1581 aaPredicted RBP30.98■■■□□ 2.55
FOXA1-205ENST00000557418 SPATA31E1Q6ZUB1 1445 aa30.98■■■□□ 2.55
FOXA1-205ENST00000557418 ADGRF5Q8IZF2 1346 aa30.96■■■□□ 2.55
FOXA1-205ENST00000557418 ANKRD30BQ9BXX2 1392 aa30.95■■■□□ 2.55
FOXA1-205ENST00000557418 PHF23Q9BUL5 403 aaPredicted RBP30.93■■■□□ 2.54
FOXA1-205ENST00000557418 SETD1AO15047 1707 aaKnown RBP30.9■■■□□ 2.54
FOXA1-205ENST00000557418 DCCP43146 1447 aa30.89■■■□□ 2.53
FOXA1-205ENST00000557418 PHLPP1O60346 1717 aa30.87■■■□□ 2.53
FOXA1-205ENST00000557418 ROBO2Q9HCK4 1378 aa30.85■■■□□ 2.53
FOXA1-205ENST00000557418 ADGRL3Q9HAR2 1447 aa30.84■■■□□ 2.53
FOXA1-205ENST00000557418 BRINP3Q76B58 766 aa30.84■■■□□ 2.53
FOXA1-205ENST00000557418 IFT172Q9UG01 1749 aa30.84■■■□□ 2.53
FOXA1-205ENST00000557418 PTCH1Q13635 1447 aa30.83■■■□□ 2.53
FOXA1-205ENST00000557418 STK26Q9P289 416 aa30.82■■■□□ 2.52
FOXA1-205ENST00000557418 SOCS7O14512 581 aa30.81■■■□□ 2.52
FOXA1-205ENST00000557418 TMEM132EQ6IEE7 984 aa30.8■■■□□ 2.52
FOXA1-205ENST00000557418 JCADQ9P266 1359 aa30.79■■■□□ 2.52
FOXA1-205ENST00000557418 MST1RQ04912 1400 aa30.79■■■□□ 2.52
FOXA1-205ENST00000557418 DHX57Q6P158 1386 aaKnown RBP30.79■■■□□ 2.52
FOXA1-205ENST00000557418 PRAG1Q86YV5 1406 aa30.77■■■□□ 2.52
FOXA1-205ENST00000557418 NALCNQ8IZF0 1738 aa30.76■■■□□ 2.52
FOXA1-205ENST00000557418 PIK3C2GO75747 1445 aa30.76■■■□□ 2.51
FOXA1-205ENST00000557418 C14orf93Q9H972 538 aaKnown RBP30.76■■■□□ 2.51
FOXA1-205ENST00000557418 LRPPRCP42704 1394 aaKnown RBP30.74■■■□□ 2.51
FOXA1-205ENST00000557418 COL16A1Q07092 1604 aaPredicted RBP30.73■■■□□ 2.51
FOXA1-205ENST00000557418 AHDC1Q5TGY3 1603 aaPredicted RBP30.73■■■□□ 2.51
FOXA1-205ENST00000557418 ABCC11Q96J66 1382 aa30.72■■■□□ 2.51
FOXA1-205ENST00000557418 CFAP70Q5T0N1 1121 aa30.72■■■□□ 2.51
FOXA1-205ENST00000557418 WAPLQ7Z5K2 1190 aa30.72■■■□□ 2.51
FOXA1-205ENST00000557418 ASXL1Q8IXJ9 1541 aa30.7■■■□□ 2.51
FOXA1-205ENST00000557418 KDM2AQ9Y2K7 1162 aa30.69■■■□□ 2.5
FOXA1-205ENST00000557418 MYOM2P54296 1465 aa30.69■■■□□ 2.5
FOXA1-205ENST00000557418 DCAF11Q8TEB1 546 aa30.68■■■□□ 2.5
FOXA1-205ENST00000557418 RGS17Q9UGC6 210 aaPredicted RBP30.68■■■□□ 2.5
FOXA1-205ENST00000557418 C1orf167Q5SNV9 1468 aa30.68■■■□□ 2.5
FOXA1-205ENST00000557418 NRXN1Q9ULB1 1477 aa30.67■■■□□ 2.5
FOXA1-205ENST00000557418 SPATA31A6Q5VVP1 1343 aa30.67■■■□□ 2.5
FOXA1-205ENST00000557418 TECPR2O15040 1411 aa30.66■■■□□ 2.5
FOXA1-205ENST00000557418 YTHDC2Q9H6S0 1430 aaKnown RBP30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms