RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 CEP164Q9UPV0 1460 aa9.68□□□□□ -0.86
FOXN3-215ENST00000557261 SH3D19Q5HYK7 790 aa9.68□□□□□ -0.86
FOXN3-215ENST00000557261 TMUB1Q9BVT8 246 aa9.68□□□□□ -0.86
FOXN3-215ENST00000557261 CDHR5Q9HBB8 845 aa9.67□□□□□ -0.86
FOXN3-215ENST00000557261 MDM2Q00987 491 aaPredicted RBP9.66□□□□□ -0.86
FOXN3-215ENST00000557261 NESP48681 1621 aa9.66□□□□□ -0.86
FOXN3-215ENST00000557261 FBXO31Q5XUX0 539 aaPredicted RBP9.65□□□□□ -0.86
FOXN3-215ENST00000557261 KCTD17Q8N5Z5 321 aa9.65□□□□□ -0.86
FOXN3-215ENST00000557261 NLRP7Q8WX94 980 aa9.65□□□□□ -0.86
FOXN3-215ENST00000557261 PTGER2P43116 358 aa9.64□□□□□ -0.87
FOXN3-215ENST00000557261 POLR3EQ9NVU0 708 aa9.64□□□□□ -0.87
FOXN3-215ENST00000557261 AEBP1Q8IUX7 1158 aa9.63□□□□□ -0.87
FOXN3-215ENST00000557261 WDR97A6NE52 1622 aa9.63□□□□□ -0.87
FOXN3-215ENST00000557261 NUDT7P0C024 238 aa9.62□□□□□ -0.87
FOXN3-215ENST00000557261 FAM161AQ3B820 660 aa9.62□□□□□ -0.87
FOXN3-215ENST00000557261 ZNF687Q8N1G0 1237 aa9.62□□□□□ -0.87
FOXN3-215ENST00000557261 TRAIPQ9BWF2 469 aa9.62□□□□□ -0.87
FOXN3-215ENST00000557261 NPDC1Q9NQX5 325 aaPredicted RBP9.62□□□□□ -0.87
FOXN3-215ENST00000557261 TOPBP1Q92547 1522 aa9.61□□□□□ -0.87
FOXN3-215ENST00000557261 KIF21BO75037 1637 aa9.61□□□□□ -0.87
FOXN3-215ENST00000557261 SKIV2LQ15477 1246 aaKnown RBP9.61□□□□□ -0.87
FOXN3-215ENST00000557261 SNRKQ9NRH2 765 aa9.61□□□□□ -0.87
FOXN3-215ENST00000557261 COG6Q9Y2V7 657 aa9.61□□□□□ -0.87
FOXN3-215ENST00000557261 PCDHGA4Q9Y5G9 962 aa9.61□□□□□ -0.87
FOXN3-215ENST00000557261 SLC34A2O95436 690 aa9.6□□□□□ -0.87
FOXN3-215ENST00000557261 SSTR3P32745 418 aaPredicted RBP9.6□□□□□ -0.87
FOXN3-215ENST00000557261 WDR62O43379 1518 aa9.6□□□□□ -0.87
FOXN3-215ENST00000557261 EVI5O60447 810 aa9.59□□□□□ -0.87
FOXN3-215ENST00000557261 RETREG2Q8NC44 543 aa9.59□□□□□ -0.87
FOXN3-215ENST00000557261 CCDC97Q96F63 343 aaPredicted RBP9.59□□□□□ -0.87
FOXN3-215ENST00000557261 BEGAINQ9BUH8 593 aa9.59□□□□□ -0.87
FOXN3-215ENST00000557261 ATP1B4Q9UN42 357 aaPredicted RBP9.59□□□□□ -0.87
FOXN3-215ENST00000557261 URB2Q14146 1524 aaKnown RBP9.59□□□□□ -0.87
FOXN3-215ENST00000557261 FGD5Q6ZNL6 1462 aa9.59□□□□□ -0.87
FOXN3-215ENST00000557261 MRC2Q9UBG0 1479 aa9.59□□□□□ -0.87
FOXN3-215ENST00000557261 THOC2Q8NI27 1593 aaKnown RBP9.58□□□□□ -0.88
FOXN3-215ENST00000557261 IRF5Q13568 498 aa9.58□□□□□ -0.88
FOXN3-215ENST00000557261 ABCA10Q8WWZ4 1543 aa9.57□□□□□ -0.88
FOXN3-215ENST00000557261 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
FOXN3-215ENST00000557261 SERPINA10Q9UK55 444 aa9.57□□□□□ -0.88
FOXN3-215ENST00000557261 POLA1P09884 1462 aaPredicted RBP9.57□□□□□ -0.88
FOXN3-215ENST00000557261 ERICH3Q5RHP9 1530 aa9.56□□□□□ -0.88
FOXN3-215ENST00000557261 CLCN1P35523 988 aa9.56□□□□□ -0.88
FOXN3-215ENST00000557261 LHX6Q9UPM6 363 aa9.56□□□□□ -0.88
FOXN3-215ENST00000557261 SOGA1O94964 1423 aa9.56□□□□□ -0.88
FOXN3-215ENST00000557261 RAD21O60216 631 aa9.55□□□□□ -0.88
FOXN3-215ENST00000557261 KIF27Q86VH2 1401 aa9.55□□□□□ -0.88
FOXN3-215ENST00000557261 ABCA5Q8WWZ7 1642 aa9.54□□□□□ -0.88
FOXN3-215ENST00000557261 MYSM1Q5VVJ2 828 aa9.54□□□□□ -0.88
FOXN3-215ENST00000557261 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.54□□□□□ -0.88
FOXN3-215ENST00000557261 TARBP1Q13395 1621 aaKnown RBP9.53□□□□□ -0.88
FOXN3-215ENST00000557261 TSR1Q2NL82 804 aaKnown RBP9.53□□□□□ -0.88
FOXN3-215ENST00000557261 RGS22Q8NE09 1264 aa9.53□□□□□ -0.88
FOXN3-215ENST00000557261 ZNF428Q96B54 188 aa9.53□□□□□ -0.88
FOXN3-215ENST00000557261 RBM33Q96EV2 1170 aaKnown RBP9.53□□□□□ -0.88
FOXN3-215ENST00000557261 FAM217BQ9NTX9 383 aaPredicted RBP9.53□□□□□ -0.88
FOXN3-215ENST00000557261 CUL7Q14999 1698 aa9.52□□□□□ -0.89
FOXN3-215ENST00000557261 GZF1Q9H116 711 aaPredicted RBP9.52□□□□□ -0.89
FOXN3-215ENST00000557261 MTMR7Q9Y216 660 aa9.52□□□□□ -0.89
FOXN3-215ENST00000557261 GOLGA3Q08378 1498 aa9.52□□□□□ -0.89
FOXN3-215ENST00000557261 TBC1D12O60347 775 aa9.51□□□□□ -0.89
FOXN3-215ENST00000557261 RNF166Q96A37 237 aaPredicted RBP9.51□□□□□ -0.89
FOXN3-215ENST00000557261 ZNF330Q9Y3S2 320 aaPredicted RBP9.51□□□□□ -0.89
FOXN3-215ENST00000557261 SPDYE5A6NIY4 337 aa9.5□□□□□ -0.89
FOXN3-215ENST00000557261 LSM11P83369 360 aaKnown RBP eCLIP9.5□□□□□ -0.89
FOXN3-215ENST00000557261 FOXD4L5Q5VV16 416 aaPredicted RBP9.5□□□□□ -0.89
FOXN3-215ENST00000557261 PTCD2Q8WV60 388 aaKnown RBP9.5□□□□□ -0.89
FOXN3-215ENST00000557261 FOXD4L4Q8WXT5 416 aaPredicted RBP9.5□□□□□ -0.89
FOXN3-215ENST00000557261 PRXQ9BXM0 1461 aa9.5□□□□□ -0.89
FOXN3-215ENST00000557261 RFC5P40937 340 aa9.49□□□□□ -0.89
FOXN3-215ENST00000557261 EN1Q05925 392 aaPredicted RBP9.49□□□□□ -0.89
FOXN3-215ENST00000557261 ANKRD13DQ6ZTN6 518 aa9.49□□□□□ -0.89
FOXN3-215ENST00000557261 MYT1LQ9UL68 1186 aa9.49□□□□□ -0.89
FOXN3-215ENST00000557261 RUSC2Q8N2Y8 1516 aa9.49□□□□□ -0.89
FOXN3-215ENST00000557261 POM121CA8CG34 1229 aa9.48□□□□□ -0.89
FOXN3-215ENST00000557261 MAP3K7O43318 606 aa9.48□□□□□ -0.89
FOXN3-215ENST00000557261 PBX2P40425 430 aa9.48□□□□□ -0.89
FOXN3-215ENST00000557261 GDPD2Q9HCC8 539 aa9.48□□□□□ -0.89
FOXN3-215ENST00000557261 LIMD1Q9UGP4 676 aa9.48□□□□□ -0.89
FOXN3-215ENST00000557261 IFT140Q96RY7 1462 aa9.47□□□□□ -0.89
FOXN3-215ENST00000557261 KDM4FA0A1W2PPD8 638 aa9.47□□□□□ -0.89
FOXN3-215ENST00000557261 CLK2P49760 499 aaKnown RBP9.47□□□□□ -0.89
FOXN3-215ENST00000557261 POTEEQ6S8J3 1075 aa9.47□□□□□ -0.89
FOXN3-215ENST00000557261 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
FOXN3-215ENST00000557261 PBRM1Q86U86 1689 aa9.46□□□□□ -0.89
FOXN3-215ENST00000557261 METTL3Q86U44 580 aaKnown RBP9.46□□□□□ -0.9
FOXN3-215ENST00000557261 MTMR14Q8NCE2 650 aa9.46□□□□□ -0.9
FOXN3-215ENST00000557261 TBC1D2Q9BYX2 928 aa9.46□□□□□ -0.9
FOXN3-215ENST00000557261 TNIKQ9UKE5 1360 aa9.45□□□□□ -0.9
FOXN3-215ENST00000557261 PSDA5PKW4 1024 aaPredicted RBP9.44□□□□□ -0.9
FOXN3-215ENST00000557261 MFAP1P55081 439 aaKnown RBP9.44□□□□□ -0.9
FOXN3-215ENST00000557261 TMCO4Q5TGY1 634 aa9.44□□□□□ -0.9
FOXN3-215ENST00000557261 ANO8Q9HCE9 1232 aaPredicted RBP9.44□□□□□ -0.9
FOXN3-215ENST00000557261 RAD54L2Q9Y4B4 1467 aa9.43□□□□□ -0.9
FOXN3-215ENST00000557261 PADI6Q6TGC4 694 aa9.43□□□□□ -0.9
FOXN3-215ENST00000557261 PCDHGA10Q9Y5H3 936 aa9.43□□□□□ -0.9
FOXN3-215ENST00000557261 BANK1Q8NDB2 785 aa9.42□□□□□ -0.9
FOXN3-215ENST00000557261 GAPVD1Q14C86 1478 aa9.41□□□□□ -0.9
FOXN3-215ENST00000557261 RAPGEF2Q9Y4G8 1499 aa9.41□□□□□ -0.9
FOXN3-215ENST00000557261 CARNS1A5YM72 827 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms