RNA–Protein interactions for RNA: ENST00000556899.1

LINC01197-203, Transcript of long intergenic non-protein coding RNA 1197, humanhuman

TSL 4

Gene LINC01197, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01197-203ENST00000556899 LRRC7Q96NW7 1537 aa28.99■■■□□ 2.23
LINC01197-203ENST00000556899 PIP4K2BP78356 416 aa28.99■■■□□ 2.23
LINC01197-203ENST00000556899 RIMS2Q9UQ26 1411 aa28.98■■■□□ 2.23
LINC01197-203ENST00000556899 HSPA1LP34931 641 aa28.97■■■□□ 2.23
LINC01197-203ENST00000556899 SLC26A8Q96RN1 970 aa28.97■■■□□ 2.23
LINC01197-203ENST00000556899 XIRP1Q702N8 1843 aaKnown RBP28.97■■■□□ 2.23
LINC01197-203ENST00000556899 SCAF1Q9H7N4 1312 aaKnown RBP28.95■■■□□ 2.23
LINC01197-203ENST00000556899 SOCS7O14512 581 aa28.94■■■□□ 2.22
LINC01197-203ENST00000556899 CHGAP10645 457 aaKnown RBP28.94■■■□□ 2.22
LINC01197-203ENST00000556899 NUTM2DQ5VT03 806 aaPredicted RBP28.94■■■□□ 2.22
LINC01197-203ENST00000556899 CLTCL1P53675 1640 aa28.93■■■□□ 2.22
LINC01197-203ENST00000556899 TRIM52Q96A61 297 aa28.9■■■□□ 2.22
LINC01197-203ENST00000556899 PLEKHG1Q9ULL1 1385 aa28.89■■■□□ 2.22
LINC01197-203ENST00000556899 TRPM2O94759 1503 aa28.88■■■□□ 2.21
LINC01197-203ENST00000556899 ADAMTS13Q76LX8 1427 aa28.86■■■□□ 2.21
LINC01197-203ENST00000556899 FOXD1Q16676 465 aa28.84■■■□□ 2.21
LINC01197-203ENST00000556899 NWD1Q149M9 1564 aa28.83■■■□□ 2.21
LINC01197-203ENST00000556899 KCNA6P17658 529 aa28.82■■■□□ 2.2
LINC01197-203ENST00000556899 RBM33Q96EV2 1170 aaKnown RBP28.82■■■□□ 2.2
LINC01197-203ENST00000556899 CHD2O14647 1828 aaKnown RBP28.81■■■□□ 2.2
LINC01197-203ENST00000556899 SLC4A1APQ9BWU0 796 aaKnown RBP28.81■■■□□ 2.2
LINC01197-203ENST00000556899 NRXN3Q9Y4C0 1643 aa28.8■■■□□ 2.2
LINC01197-203ENST00000556899 PPP1R15AO75807 674 aaPredicted RBP28.79■■■□□ 2.2
LINC01197-203ENST00000556899 BCANQ96GW7 911 aa28.78■■■□□ 2.2
LINC01197-203ENST00000556899 NEXMIFQ5QGS0 1516 aa28.77■■■□□ 2.2
LINC01197-203ENST00000556899 TMEM94Q12767 1356 aa28.76■■■□□ 2.2
LINC01197-203ENST00000556899 MED1Q15648 1581 aaPredicted RBP28.76■■■□□ 2.19
LINC01197-203ENST00000556899 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.76■■■□□ 2.19
LINC01197-203ENST00000556899 TBX22Q9Y458 520 aa28.75■■■□□ 2.19
LINC01197-203ENST00000556899 KIF1BO60333 1816 aa28.75■■■□□ 2.19
LINC01197-203ENST00000556899 HDGFP51858 240 aaKnown RBP28.73■■■□□ 2.19
LINC01197-203ENST00000556899 PTPRUQ92729 1446 aa28.72■■■□□ 2.19
LINC01197-203ENST00000556899 SETD5Q9C0A6 1442 aa28.72■■■□□ 2.19
LINC01197-203ENST00000556899 MPHOSPH9Q99550 1183 aa28.72■■■□□ 2.19
LINC01197-203ENST00000556899 NKTRP30414 1462 aaKnown RBP28.71■■■□□ 2.19
LINC01197-203ENST00000556899 PROSER2Q86WR7 435 aaPredicted RBP28.7■■■□□ 2.18
LINC01197-203ENST00000556899 ZNF326Q5BKZ1 582 aaKnown RBP28.69■■■□□ 2.18
LINC01197-203ENST00000556899 SETBP1Q9Y6X0 1596 aa28.69■■■□□ 2.18
LINC01197-203ENST00000556899 DIP2AQ14689 1571 aa28.68■■■□□ 2.18
LINC01197-203ENST00000556899 RAB3GAP2Q9H2M9 1393 aa28.67■■■□□ 2.18
LINC01197-203ENST00000556899 METP08581 1390 aa28.62■■■□□ 2.17
LINC01197-203ENST00000556899 PPLO60437 1756 aa28.61■■■□□ 2.17
LINC01197-203ENST00000556899 PIK3R4Q99570 1358 aa28.6■■■□□ 2.17
LINC01197-203ENST00000556899 SETD1AO15047 1707 aaKnown RBP28.6■■■□□ 2.17
LINC01197-203ENST00000556899 XRN1Q8IZH2 1706 aaKnown RBP28.6■■■□□ 2.17
LINC01197-203ENST00000556899 FAM135BQ49AJ0 1406 aa28.6■■■□□ 2.17
LINC01197-203ENST00000556899 SPATA31E1Q6ZUB1 1445 aa28.59■■■□□ 2.17
LINC01197-203ENST00000556899 AMOTL2Q9Y2J4 779 aa28.58■■■□□ 2.17
LINC01197-203ENST00000556899 CCDC144AA2RUR9 1427 aa28.53■■■□□ 2.16
LINC01197-203ENST00000556899 PHF23Q9BUL5 403 aaPredicted RBP28.51■■■□□ 2.15
LINC01197-203ENST00000556899 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.51■■■□□ 2.15
LINC01197-203ENST00000556899 IFT172Q9UG01 1749 aa28.51■■■□□ 2.15
LINC01197-203ENST00000556899 ROBO1Q9Y6N7 1651 aa28.51■■■□□ 2.15
LINC01197-203ENST00000556899 RPGRIP1LQ68CZ1 1315 aa28.5■■■□□ 2.15
LINC01197-203ENST00000556899 MSH6P52701 1360 aa28.5■■■□□ 2.15
LINC01197-203ENST00000556899 ADGRF5Q8IZF2 1346 aa28.49■■■□□ 2.15
LINC01197-203ENST00000556899 RGL3Q3MIN7 710 aa28.49■■■□□ 2.15
LINC01197-203ENST00000556899 NCOA3Q9Y6Q9 1424 aa28.47■■■□□ 2.15
LINC01197-203ENST00000556899 VGFO15240 615 aaPredicted RBP28.46■■■□□ 2.15
LINC01197-203ENST00000556899 RGS17Q9UGC6 210 aaPredicted RBP28.45■■■□□ 2.14
LINC01197-203ENST00000556899 SLAIN2Q9P270 581 aa28.44■■■□□ 2.14
LINC01197-203ENST00000556899 ANKRD30BQ9BXX2 1392 aa28.42■■■□□ 2.14
LINC01197-203ENST00000556899 C19orf44Q9H6X5 657 aa28.4■■■□□ 2.14
LINC01197-203ENST00000556899 ROBO2Q9HCK4 1378 aa28.39■■■□□ 2.14
LINC01197-203ENST00000556899 ASXL1Q8IXJ9 1541 aa28.39■■■□□ 2.14
LINC01197-203ENST00000556899 NALCNQ8IZF0 1738 aa28.38■■■□□ 2.13
LINC01197-203ENST00000556899 C14orf37Q86TY3 774 aa28.38■■■□□ 2.13
LINC01197-203ENST00000556899 ACIN1Q9UKV3 1341 aaKnown RBP28.38■■■□□ 2.13
LINC01197-203ENST00000556899 HRCP23327 699 aa28.37■■■□□ 2.13
LINC01197-203ENST00000556899 PRAG1Q86YV5 1406 aa28.35■■■□□ 2.13
LINC01197-203ENST00000556899 PIK3C2GO75747 1445 aa28.34■■■□□ 2.13
LINC01197-203ENST00000556899 PTCH1Q13635 1447 aa28.33■■■□□ 2.13
LINC01197-203ENST00000556899 ADGRL3Q9HAR2 1447 aa28.32■■■□□ 2.12
LINC01197-203ENST00000556899 NRXN1Q9ULB1 1477 aa28.32■■■□□ 2.12
LINC01197-203ENST00000556899 MST1RQ04912 1400 aa28.31■■■□□ 2.12
LINC01197-203ENST00000556899 PHLPP1O60346 1717 aa28.31■■■□□ 2.12
LINC01197-203ENST00000556899 CADPS2Q86UW7 1296 aa28.3■■■□□ 2.12
LINC01197-203ENST00000556899 DCCP43146 1447 aa28.29■■■□□ 2.12
LINC01197-203ENST00000556899 TMEM132EQ6IEE7 984 aa28.29■■■□□ 2.12
LINC01197-203ENST00000556899 COL16A1Q07092 1604 aaPredicted RBP28.29■■■□□ 2.12
LINC01197-203ENST00000556899 ATF3P18847 181 aa28.28■■■□□ 2.12
LINC01197-203ENST00000556899 BRINP3Q76B58 766 aa28.26■■■□□ 2.11
LINC01197-203ENST00000556899 MYOM2P54296 1465 aa28.26■■■□□ 2.11
LINC01197-203ENST00000556899 POTEAQ6S8J7 498 aa28.25■■■□□ 2.11
LINC01197-203ENST00000556899 JCADQ9P266 1359 aa28.24■■■□□ 2.11
LINC01197-203ENST00000556899 AHDC1Q5TGY3 1603 aaPredicted RBP28.23■■■□□ 2.11
LINC01197-203ENST00000556899 PLEKHH1Q9ULM0 1364 aa28.23■■■□□ 2.11
LINC01197-203ENST00000556899 TECPR2O15040 1411 aa28.22■■■□□ 2.11
LINC01197-203ENST00000556899 CFAP70Q5T0N1 1121 aa28.22■■■□□ 2.11
LINC01197-203ENST00000556899 C14orf93Q9H972 538 aaKnown RBP28.22■■■□□ 2.11
LINC01197-203ENST00000556899 STK26Q9P289 416 aa28.22■■■□□ 2.11
LINC01197-203ENST00000556899 LRPPRCP42704 1394 aaKnown RBP28.22■■■□□ 2.11
LINC01197-203ENST00000556899 WAPLQ7Z5K2 1190 aa28.2■■■□□ 2.1
LINC01197-203ENST00000556899 DHX57Q6P158 1386 aaKnown RBP28.2■■■□□ 2.1
LINC01197-203ENST00000556899 KNDC1Q76NI1 1749 aa28.2■■■□□ 2.1
LINC01197-203ENST00000556899 DDX17Q92841 729 aaKnown RBP28.19■■■□□ 2.1
LINC01197-203ENST00000556899 ABCC11Q96J66 1382 aa28.18■■■□□ 2.1
LINC01197-203ENST00000556899 YTHDC2Q9H6S0 1430 aaKnown RBP28.18■■■□□ 2.1
LINC01197-203ENST00000556899 C1orf167Q5SNV9 1468 aa28.17■■■□□ 2.1
LINC01197-203ENST00000556899 NHSL1Q5SYE7 1610 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms