RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 IQSEC2Q5JU85 1478 aa15.56■□□□□ 0.08
SNX6-208ENST00000556712 KIF1BO60333 1816 aa15.56■□□□□ 0.08
SNX6-208ENST00000556712 SETD5Q9C0A6 1442 aa15.55■□□□□ 0.08
SNX6-208ENST00000556712 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
SNX6-208ENST00000556712 RAB3GAP2Q9H2M9 1393 aa15.53■□□□□ 0.08
SNX6-208ENST00000556712 FOXD1Q16676 465 aa15.53■□□□□ 0.08
SNX6-208ENST00000556712 NUTM2DQ5VT03 806 aaPredicted RBP15.52■□□□□ 0.08
SNX6-208ENST00000556712 XIRP1Q702N8 1843 aaKnown RBP15.52■□□□□ 0.07
SNX6-208ENST00000556712 PPP1R15AO75807 674 aaPredicted RBP15.51■□□□□ 0.07
SNX6-208ENST00000556712 SLC26A8Q96RN1 970 aa15.51■□□□□ 0.07
SNX6-208ENST00000556712 PLEKHG1Q9ULL1 1385 aa15.5■□□□□ 0.07
SNX6-208ENST00000556712 NEXMIFQ5QGS0 1516 aa15.5■□□□□ 0.07
SNX6-208ENST00000556712 LRRC7Q96NW7 1537 aa15.5■□□□□ 0.07
SNX6-208ENST00000556712 NRXN3Q9Y4C0 1643 aa15.5■□□□□ 0.07
SNX6-208ENST00000556712 NWD1Q149M9 1564 aa15.49■□□□□ 0.07
SNX6-208ENST00000556712 BCANQ96GW7 911 aa15.49■□□□□ 0.07
SNX6-208ENST00000556712 ZNF326Q5BKZ1 582 aaKnown RBP15.47■□□□□ 0.07
SNX6-208ENST00000556712 CHD2O14647 1828 aaKnown RBP15.47■□□□□ 0.07
SNX6-208ENST00000556712 DIP2AQ14689 1571 aa15.46■□□□□ 0.07
SNX6-208ENST00000556712 ADAMTS13Q76LX8 1427 aa15.46■□□□□ 0.07
SNX6-208ENST00000556712 MPHOSPH9Q99550 1183 aa15.46■□□□□ 0.07
SNX6-208ENST00000556712 PPLO60437 1756 aa15.46■□□□□ 0.07
SNX6-208ENST00000556712 ALKQ9UM73 1620 aa15.46■□□□□ 0.06
SNX6-208ENST00000556712 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNX6-208ENST00000556712 SETBP1Q9Y6X0 1596 aa15.45■□□□□ 0.06
SNX6-208ENST00000556712 UBAP1LF5GYI3 381 aa15.44■□□□□ 0.06
SNX6-208ENST00000556712 HDGFP51858 240 aaKnown RBP15.43■□□□□ 0.06
SNX6-208ENST00000556712 NKTRP30414 1462 aaKnown RBP15.43■□□□□ 0.06
SNX6-208ENST00000556712 IFT172Q9UG01 1749 aa15.43■□□□□ 0.06
SNX6-208ENST00000556712 CCDC144AA2RUR9 1427 aa15.43■□□□□ 0.06
SNX6-208ENST00000556712 SETD1AO15047 1707 aaKnown RBP15.41■□□□□ 0.06
SNX6-208ENST00000556712 KCNA6P17658 529 aa15.4■□□□□ 0.06
SNX6-208ENST00000556712 RBM33Q96EV2 1170 aaKnown RBP15.4■□□□□ 0.06
SNX6-208ENST00000556712 TMEM94Q12767 1356 aa15.39■□□□□ 0.05
SNX6-208ENST00000556712 XRN1Q8IZH2 1706 aaKnown RBP15.39■□□□□ 0.05
SNX6-208ENST00000556712 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
SNX6-208ENST00000556712 SPATA31E1Q6ZUB1 1445 aa15.38■□□□□ 0.05
SNX6-208ENST00000556712 PTPRUQ92729 1446 aa15.38■□□□□ 0.05
SNX6-208ENST00000556712 PIP4K2BP78356 416 aa15.38■□□□□ 0.05
SNX6-208ENST00000556712 TBX22Q9Y458 520 aa15.37■□□□□ 0.05
SNX6-208ENST00000556712 ACIN1Q9UKV3 1341 aaKnown RBP15.36■□□□□ 0.05
SNX6-208ENST00000556712 TOM1O60784 492 aa15.35■□□□□ 0.05
SNX6-208ENST00000556712 PROSER2Q86WR7 435 aaPredicted RBP15.35■□□□□ 0.05
SNX6-208ENST00000556712 METP08581 1390 aa15.34■□□□□ 0.05
SNX6-208ENST00000556712 PIK3R4Q99570 1358 aa15.34■□□□□ 0.05
SNX6-208ENST00000556712 RGL3Q3MIN7 710 aa15.33■□□□□ 0.04
SNX6-208ENST00000556712 RPGRIP1LQ68CZ1 1315 aa15.32■□□□□ 0.04
SNX6-208ENST00000556712 ANKRD30BQ9BXX2 1392 aa15.32■□□□□ 0.04
SNX6-208ENST00000556712 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.31■□□□□ 0.04
SNX6-208ENST00000556712 ASXL1Q8IXJ9 1541 aa15.3■□□□□ 0.04
SNX6-208ENST00000556712 NALCNQ8IZF0 1738 aa15.3■□□□□ 0.04
SNX6-208ENST00000556712 AMOTL2Q9Y2J4 779 aa15.3■□□□□ 0.04
SNX6-208ENST00000556712 ROBO1Q9Y6N7 1651 aa15.29■□□□□ 0.04
SNX6-208ENST00000556712 MSH6P52701 1360 aa15.29■□□□□ 0.04
SNX6-208ENST00000556712 ADGRF5Q8IZF2 1346 aa15.29■□□□□ 0.04
SNX6-208ENST00000556712 VGFO15240 615 aaPredicted RBP15.29■□□□□ 0.04
SNX6-208ENST00000556712 HRCP23327 699 aa15.29■□□□□ 0.04
SNX6-208ENST00000556712 HSPA1LP34931 641 aa15.27■□□□□ 0.04
SNX6-208ENST00000556712 MYOM2P54296 1465 aa15.27■□□□□ 0.03
SNX6-208ENST00000556712 PIK3C2GO75747 1445 aa15.26■□□□□ 0.03
SNX6-208ENST00000556712 C14orf37Q86TY3 774 aa15.26■□□□□ 0.03
SNX6-208ENST00000556712 KNDC1Q76NI1 1749 aa15.24■□□□□ 0.03
SNX6-208ENST00000556712 NRXN1Q9ULB1 1477 aa15.24■□□□□ 0.03
SNX6-208ENST00000556712 PTCH1Q13635 1447 aa15.24■□□□□ 0.03
SNX6-208ENST00000556712 NCOA3Q9Y6Q9 1424 aa15.24■□□□□ 0.03
SNX6-208ENST00000556712 LAMC1P11047 1609 aa15.24■□□□□ 0.03
SNX6-208ENST00000556712 ROBO2Q9HCK4 1378 aa15.23■□□□□ 0.03
SNX6-208ENST00000556712 PRAG1Q86YV5 1406 aa15.21■□□□□ 0.03
SNX6-208ENST00000556712 ADGRL3Q9HAR2 1447 aa15.21■□□□□ 0.03
SNX6-208ENST00000556712 FAM135BQ49AJ0 1406 aa15.2■□□□□ 0.02
SNX6-208ENST00000556712 PHLPP1O60346 1717 aa15.2■□□□□ 0.02
SNX6-208ENST00000556712 DCCP43146 1447 aa15.19■□□□□ 0.02
SNX6-208ENST00000556712 TMEM132EQ6IEE7 984 aa15.18■□□□□ 0.02
SNX6-208ENST00000556712 C19orf44Q9H6X5 657 aa15.18■□□□□ 0.02
SNX6-208ENST00000556712 SLAIN2Q9P270 581 aa15.18■□□□□ 0.02
SNX6-208ENST00000556712 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
SNX6-208ENST00000556712 MED1Q15648 1581 aaPredicted RBP15.18■□□□□ 0.02
SNX6-208ENST00000556712 TECPR2O15040 1411 aa15.17■□□□□ 0.02
SNX6-208ENST00000556712 ATF3P18847 181 aa15.17■□□□□ 0.02
SNX6-208ENST00000556712 STK26Q9P289 416 aa15.17■□□□□ 0.02
SNX6-208ENST00000556712 MST1RQ04912 1400 aa15.17■□□□□ 0.02
SNX6-208ENST00000556712 YTHDC2Q9H6S0 1430 aaKnown RBP15.17■□□□□ 0.02
SNX6-208ENST00000556712 LRPPRCP42704 1394 aaKnown RBP15.16■□□□□ 0.02
SNX6-208ENST00000556712 TRIM26Q12899 539 aaPredicted RBP15.16■□□□□ 0.02
SNX6-208ENST00000556712 CFAP70Q5T0N1 1121 aa15.16■□□□□ 0.02
SNX6-208ENST00000556712 CADPS2Q86UW7 1296 aa15.16■□□□□ 0.02
SNX6-208ENST00000556712 DCAF11Q8TEB1 546 aa15.16■□□□□ 0.02
SNX6-208ENST00000556712 KDM2AQ9Y2K7 1162 aa15.16■□□□□ 0.02
SNX6-208ENST00000556712 COL16A1Q07092 1604 aaPredicted RBP15.16■□□□□ 0.02
SNX6-208ENST00000556712 ADGRB1O14514 1584 aa15.15■□□□□ 0.02
SNX6-208ENST00000556712 PLEKHH1Q9ULM0 1364 aa15.15■□□□□ 0.02
SNX6-208ENST00000556712 CDC42BPGQ6DT37 1551 aa15.15■□□□□ 0.02
SNX6-208ENST00000556712 DISP3Q9P2K9 1392 aa15.14■□□□□ 0.01
SNX6-208ENST00000556712 AHDC1Q5TGY3 1603 aaPredicted RBP15.14■□□□□ 0.01
SNX6-208ENST00000556712 C14orf93Q9H972 538 aaKnown RBP15.13■□□□□ 0.01
SNX6-208ENST00000556712 NHSL1Q5SYE7 1610 aa15.13■□□□□ 0.01
SNX6-208ENST00000556712 ABCC11Q96J66 1382 aa15.12■□□□□ 0.01
SNX6-208ENST00000556712 WAPLQ7Z5K2 1190 aa15.12■□□□□ 0.01
SNX6-208ENST00000556712 BRINP3Q76B58 766 aa15.11■□□□□ 0.01
SNX6-208ENST00000556712 C1orf167Q5SNV9 1468 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms