RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 SOWAHBA6NEL2 793 aa8.77□□□□□ -1.01
ATXN3-239ENST00000556315 ZFRQ96KR1 1074 aaKnown RBP8.77□□□□□ -1.01
ATXN3-239ENST00000556315 ABCA10Q8WWZ4 1543 aa8.76□□□□□ -1.01
ATXN3-239ENST00000556315 NBR1Q14596 966 aa8.76□□□□□ -1.01
ATXN3-239ENST00000556315 NUP160Q12769 1436 aa8.76□□□□□ -1.01
ATXN3-239ENST00000556315 RGS20O76081 388 aa8.75□□□□□ -1.01
ATXN3-239ENST00000556315 BCAMP50895 628 aa8.75□□□□□ -1.01
ATXN3-239ENST00000556315 TSR1Q2NL82 804 aaKnown RBP8.75□□□□□ -1.01
ATXN3-239ENST00000556315 GRIN2AQ12879 1464 aa8.75□□□□□ -1.01
ATXN3-239ENST00000556315 ERCC6L2Q5T890 1561 aa8.74□□□□□ -1.01
ATXN3-239ENST00000556315 SEPT9Q9UHD8 586 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-239ENST00000556315 A0A0G2JS52 829 aa8.73□□□□□ -1.01
ATXN3-239ENST00000556315 MAP3K7O43318 606 aa8.73□□□□□ -1.01
ATXN3-239ENST00000556315 ITGBL1O95965 494 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-239ENST00000556315 FAM98CQ17RN3 349 aaKnown RBP8.73□□□□□ -1.01
ATXN3-239ENST00000556315 FHAD1B1AJZ9 1412 aa8.72□□□□□ -1.01
ATXN3-239ENST00000556315 WRNQ14191 1432 aaPredicted RBP eCLIP8.72□□□□□ -1.01
ATXN3-239ENST00000556315 PRG4Q92954 1404 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-239ENST00000556315 PRIM1P49642 420 aaKnown RBP8.72□□□□□ -1.01
ATXN3-239ENST00000556315 NYAP1Q6ZVC0 841 aa8.72□□□□□ -1.01
ATXN3-239ENST00000556315 WDR70Q9NW82 654 aa8.72□□□□□ -1.01
ATXN3-239ENST00000556315 TSKSQ9UJT2 592 aa8.72□□□□□ -1.01
ATXN3-239ENST00000556315 CEP170Q5SW79 1584 aa8.72□□□□□ -1.01
ATXN3-239ENST00000556315 VSIG10Q8N0Z9 540 aa8.71□□□□□ -1.02
ATXN3-239ENST00000556315 ABCC10Q5T3U5 1492 aa8.7□□□□□ -1.02
ATXN3-239ENST00000556315 PACS2Q86VP3 889 aa8.7□□□□□ -1.02
ATXN3-239ENST00000556315 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
ATXN3-239ENST00000556315 CERKQ8TCT0 537 aa8.69□□□□□ -1.02
ATXN3-239ENST00000556315 PRSS12P56730 875 aa8.68□□□□□ -1.02
ATXN3-239ENST00000556315 CDCA7LQ96GN5 454 aa8.68□□□□□ -1.02
ATXN3-239ENST00000556315 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-239ENST00000556315 ABCA5Q8WWZ7 1642 aa8.68□□□□□ -1.02
ATXN3-239ENST00000556315 GRXCR2A6NFK2 248 aa8.67□□□□□ -1.02
ATXN3-239ENST00000556315 OSBPP22059 807 aa8.67□□□□□ -1.02
ATXN3-239ENST00000556315 FAM198AQ9UFP1 575 aa8.67□□□□□ -1.02
ATXN3-239ENST00000556315 TSR3Q9UJK0 312 aaKnown RBP8.67□□□□□ -1.02
ATXN3-239ENST00000556315 LRCH3Q96II8 777 aa8.66□□□□□ -1.02
ATXN3-239ENST00000556315 TSHZ2Q9NRE2 1034 aa8.66□□□□□ -1.02
ATXN3-239ENST00000556315 PBRM1Q86U86 1689 aa8.65□□□□□ -1.02
ATXN3-239ENST00000556315 HPS5Q9UPZ3 1129 aa8.65□□□□□ -1.02
ATXN3-239ENST00000556315 SHROOM2Q13796 1616 aa8.65□□□□□ -1.03
ATXN3-239ENST00000556315 ADAMTS12P58397 1594 aa8.64□□□□□ -1.03
ATXN3-239ENST00000556315 C3orf80F5H4A9 247 aa8.63□□□□□ -1.03
ATXN3-239ENST00000556315 CDHR5Q9HBB8 845 aa8.63□□□□□ -1.03
ATXN3-239ENST00000556315 RBM27Q9P2N5 1060 aaKnown RBP8.63□□□□□ -1.03
ATXN3-239ENST00000556315 MAPKBP1O60336 1514 aa8.63□□□□□ -1.03
ATXN3-239ENST00000556315 ERICH3Q5RHP9 1530 aa8.63□□□□□ -1.03
ATXN3-239ENST00000556315 SMAPO00193 183 aa8.62□□□□□ -1.03
ATXN3-239ENST00000556315 KCNC4Q03721 635 aa8.62□□□□□ -1.03
ATXN3-239ENST00000556315 TATDN2Q93075 761 aa8.62□□□□□ -1.03
ATXN3-239ENST00000556315 TTC13Q8NBP0 860 aa8.61□□□□□ -1.03
ATXN3-239ENST00000556315 KIF13AQ9H1H9 1805 aa8.6□□□□□ -1.03
ATXN3-239ENST00000556315 NBPF26B4DH59 902 aa8.6□□□□□ -1.03
ATXN3-239ENST00000556315 SAMD7Q7Z3H4 446 aa8.6□□□□□ -1.03
ATXN3-239ENST00000556315 NPDC1Q9NQX5 325 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-239ENST00000556315 SUPT5HO00267 1087 aaKnown RBP8.59□□□□□ -1.03
ATXN3-239ENST00000556315 PPP4CP60510 307 aa8.59□□□□□ -1.03
ATXN3-239ENST00000556315 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
ATXN3-239ENST00000556315 KDM6BO15054 1643 aa8.58□□□□□ -1.04
ATXN3-239ENST00000556315 DIP2BQ9P265 1576 aa8.58□□□□□ -1.04
ATXN3-239ENST00000556315 PTPRGP23470 1445 aa8.58□□□□□ -1.04
ATXN3-239ENST00000556315 ARHGEF1Q92888 912 aaKnown RBP8.58□□□□□ -1.04
ATXN3-239ENST00000556315 KDM2AQ9Y2K7 1162 aa8.58□□□□□ -1.04
ATXN3-239ENST00000556315 NUDT18Q6ZVK8 323 aa8.57□□□□□ -1.04
ATXN3-239ENST00000556315 IRX2Q9BZI1 471 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-239ENST00000556315 KIAA0586Q9BVV6 1533 aa8.57□□□□□ -1.04
ATXN3-239ENST00000556315 TTBK1Q5TCY1 1321 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-239ENST00000556315 IGF1RP08069 1367 aa8.56□□□□□ -1.04
ATXN3-239ENST00000556315 TOP2BQ02880 1626 aa8.55□□□□□ -1.04
ATXN3-239ENST00000556315 TJAP1Q5JTD0 557 aa8.55□□□□□ -1.04
ATXN3-239ENST00000556315 PLB1Q6P1J6 1458 aa8.54□□□□□ -1.04
ATXN3-239ENST00000556315 PADI6Q6TGC4 694 aa8.54□□□□□ -1.04
ATXN3-239ENST00000556315 ADCY10Q96PN6 1610 aa8.54□□□□□ -1.04
ATXN3-239ENST00000556315 ADGRL1O94910 1474 aa8.53□□□□□ -1.04
ATXN3-239ENST00000556315 TNIKQ9UKE5 1360 aa8.53□□□□□ -1.04
ATXN3-239ENST00000556315 KCNV2Q8TDN2 545 aa8.53□□□□□ -1.04
ATXN3-239ENST00000556315 ASXL2Q76L83 1435 aa8.53□□□□□ -1.04
ATXN3-239ENST00000556315 MLLT3P42568 568 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-239ENST00000556315 FBXO41Q8TF61 875 aa8.52□□□□□ -1.05
ATXN3-239ENST00000556315 CARMIL2Q6F5E8 1435 aa8.52□□□□□ -1.05
ATXN3-239ENST00000556315 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
ATXN3-239ENST00000556315 ABCC2Q92887 1545 aa8.51□□□□□ -1.05
ATXN3-239ENST00000556315 HDGFP51858 240 aaKnown RBP8.51□□□□□ -1.05
ATXN3-239ENST00000556315 COL17A1Q9UMD9 1497 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-239ENST00000556315 BIVM-ERCC5R4GMW8 1640 aa8.51□□□□□ -1.05
ATXN3-239ENST00000556315 EYA1Q99502 592 aa8.5□□□□□ -1.05
ATXN3-239ENST00000556315 MTRQ99707 1265 aa8.5□□□□□ -1.05
ATXN3-239ENST00000556315 IL21Q9HBE4 155 aa8.5□□□□□ -1.05
ATXN3-239ENST00000556315 KIF27Q86VH2 1401 aa8.49□□□□□ -1.05
ATXN3-239ENST00000556315 APLP1P51693 650 aa8.49□□□□□ -1.05
ATXN3-239ENST00000556315 CARMIL1Q5VZK9 1371 aa8.48□□□□□ -1.05
ATXN3-239ENST00000556315 GLI2P10070 1586 aa8.48□□□□□ -1.05
ATXN3-239ENST00000556315 UACAQ9BZF9 1416 aa8.48□□□□□ -1.05
ATXN3-239ENST00000556315 SWT1Q5T5J6 900 aaKnown RBP8.48□□□□□ -1.05
ATXN3-239ENST00000556315 UHRF1BP1LA0JNW5 1464 aa8.47□□□□□ -1.05
ATXN3-239ENST00000556315 PTGDRQ13258 359 aa8.47□□□□□ -1.05
ATXN3-239ENST00000556315 SLF2Q8IX21 1173 aa8.47□□□□□ -1.05
ATXN3-239ENST00000556315 NECTIN2Q92692 538 aa8.47□□□□□ -1.05
ATXN3-239ENST00000556315 TEX14Q8IWB6 1497 aa8.46□□□□□ -1.05
ATXN3-239ENST00000556315 TSPOAP1O95153 1857 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms