RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 IQGAP3Q86VI3 1631 aa28.91■■■□□ 2.22
CDKN3-209ENST00000556102 NWD1Q149M9 1564 aa28.91■■■□□ 2.22
CDKN3-209ENST00000556102 TMEM94Q12767 1356 aa28.9■■■□□ 2.22
CDKN3-209ENST00000556102 SENP3Q9H4L4 574 aaPredicted RBP28.88■■■□□ 2.21
CDKN3-209ENST00000556102 NKTRP30414 1462 aaKnown RBP28.88■■■□□ 2.21
CDKN3-209ENST00000556102 RIMS2Q9UQ26 1411 aa28.87■■■□□ 2.21
CDKN3-209ENST00000556102 PLEKHG1Q9ULL1 1385 aa28.87■■■□□ 2.21
CDKN3-209ENST00000556102 BCANQ96GW7 911 aa28.86■■■□□ 2.21
CDKN3-209ENST00000556102 HDGFP51858 240 aaKnown RBP28.85■■■□□ 2.21
CDKN3-209ENST00000556102 PROSER2Q86WR7 435 aaPredicted RBP28.85■■■□□ 2.21
CDKN3-209ENST00000556102 ITGAEP38570 1179 aa28.83■■■□□ 2.21
CDKN3-209ENST00000556102 FAM135BQ49AJ0 1406 aa28.83■■■□□ 2.21
CDKN3-209ENST00000556102 PPP1R15AO75807 674 aaPredicted RBP28.82■■■□□ 2.2
CDKN3-209ENST00000556102 NUP155O75694 1391 aa28.82■■■□□ 2.2
CDKN3-209ENST00000556102 CHD2O14647 1828 aaKnown RBP28.82■■■□□ 2.2
CDKN3-209ENST00000556102 PPARGC1BQ86YN6 1023 aaKnown RBP28.8■■■□□ 2.2
CDKN3-209ENST00000556102 PHF23Q9BUL5 403 aaPredicted RBP28.8■■■□□ 2.2
CDKN3-209ENST00000556102 CHGAP10645 457 aaKnown RBP28.79■■■□□ 2.2
CDKN3-209ENST00000556102 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.79■■■□□ 2.2
CDKN3-209ENST00000556102 RBM33Q96EV2 1170 aaKnown RBP28.77■■■□□ 2.2
CDKN3-209ENST00000556102 ROBO1Q9Y6N7 1651 aa28.75■■■□□ 2.19
CDKN3-209ENST00000556102 TBX22Q9Y458 520 aa28.74■■■□□ 2.19
CDKN3-209ENST00000556102 MSH6P52701 1360 aa28.74■■■□□ 2.19
CDKN3-209ENST00000556102 DIP2AQ14689 1571 aa28.72■■■□□ 2.19
CDKN3-209ENST00000556102 ADAMTS13Q76LX8 1427 aa28.7■■■□□ 2.19
CDKN3-209ENST00000556102 SPHKAPQ2M3C7 1700 aa28.69■■■□□ 2.18
CDKN3-209ENST00000556102 NUTM2DQ5VT03 806 aaPredicted RBP28.69■■■□□ 2.18
CDKN3-209ENST00000556102 RRBP1Q9P2E9 1410 aaKnown RBP28.67■■■□□ 2.18
CDKN3-209ENST00000556102 PIK3R4Q99570 1358 aa28.66■■■□□ 2.18
CDKN3-209ENST00000556102 NCOA3Q9Y6Q9 1424 aa28.66■■■□□ 2.18
CDKN3-209ENST00000556102 SLAIN2Q9P270 581 aa28.63■■■□□ 2.17
CDKN3-209ENST00000556102 TRPM2O94759 1503 aa28.63■■■□□ 2.17
CDKN3-209ENST00000556102 PHLPP1O60346 1717 aa28.59■■■□□ 2.17
CDKN3-209ENST00000556102 NAIPQ13075 1403 aa28.58■■■□□ 2.17
CDKN3-209ENST00000556102 NRXN3Q9Y4C0 1643 aa28.57■■■□□ 2.16
CDKN3-209ENST00000556102 C14orf37Q86TY3 774 aa28.56■■■□□ 2.16
CDKN3-209ENST00000556102 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.56■■■□□ 2.16
CDKN3-209ENST00000556102 SETBP1Q9Y6X0 1596 aa28.56■■■□□ 2.16
CDKN3-209ENST00000556102 PTPRUQ92729 1446 aa28.55■■■□□ 2.16
CDKN3-209ENST00000556102 RGS17Q9UGC6 210 aaPredicted RBP28.55■■■□□ 2.16
CDKN3-209ENST00000556102 CLTCL1P53675 1640 aa28.54■■■□□ 2.16
CDKN3-209ENST00000556102 ZNF326Q5BKZ1 582 aaKnown RBP28.53■■■□□ 2.16
CDKN3-209ENST00000556102 C19orf44Q9H6X5 657 aa28.53■■■□□ 2.16
CDKN3-209ENST00000556102 AMOTL2Q9Y2J4 779 aa28.53■■■□□ 2.16
CDKN3-209ENST00000556102 CADPS2Q86UW7 1296 aa28.51■■■□□ 2.15
CDKN3-209ENST00000556102 XRN1Q8IZH2 1706 aaKnown RBP28.51■■■□□ 2.15
CDKN3-209ENST00000556102 JCADQ9P266 1359 aa28.5■■■□□ 2.15
CDKN3-209ENST00000556102 KIF1BO60333 1816 aa28.49■■■□□ 2.15
CDKN3-209ENST00000556102 COL16A1Q07092 1604 aaPredicted RBP28.49■■■□□ 2.15
CDKN3-209ENST00000556102 ATF3P18847 181 aa28.48■■■□□ 2.15
CDKN3-209ENST00000556102 NEXMIFQ5QGS0 1516 aa28.48■■■□□ 2.15
CDKN3-209ENST00000556102 HFM1A2PYH4 1435 aa28.46■■■□□ 2.15
CDKN3-209ENST00000556102 AHDC1Q5TGY3 1603 aaPredicted RBP28.44■■■□□ 2.14
CDKN3-209ENST00000556102 DCCP43146 1447 aa28.43■■■□□ 2.14
CDKN3-209ENST00000556102 METP08581 1390 aa28.42■■■□□ 2.14
CDKN3-209ENST00000556102 TRIM52Q96A61 297 aa28.41■■■□□ 2.14
CDKN3-209ENST00000556102 POTEAQ6S8J7 498 aa28.39■■■□□ 2.14
CDKN3-209ENST00000556102 BRINP3Q76B58 766 aa28.36■■■□□ 2.13
CDKN3-209ENST00000556102 SHPRHQ149N8 1683 aa28.35■■■□□ 2.13
CDKN3-209ENST00000556102 SLC4A1APQ9BWU0 796 aaKnown RBP28.35■■■□□ 2.13
CDKN3-209ENST00000556102 SPATA31A6Q5VVP1 1343 aa28.35■■■□□ 2.13
CDKN3-209ENST00000556102 MST1RQ04912 1400 aa28.33■■■□□ 2.13
CDKN3-209ENST00000556102 ADGRL3Q9HAR2 1447 aa28.33■■■□□ 2.13
CDKN3-209ENST00000556102 ASXL1Q8IXJ9 1541 aa28.32■■■□□ 2.12
CDKN3-209ENST00000556102 LRP6O75581 1613 aa28.32■■■□□ 2.12
CDKN3-209ENST00000556102 SETD1AO15047 1707 aaKnown RBP28.32■■■□□ 2.12
CDKN3-209ENST00000556102 VGFO15240 615 aaPredicted RBP28.31■■■□□ 2.12
CDKN3-209ENST00000556102 NALCNQ8IZF0 1738 aa28.31■■■□□ 2.12
CDKN3-209ENST00000556102 RPGRIP1LQ68CZ1 1315 aa28.29■■■□□ 2.12
CDKN3-209ENST00000556102 NHSL1Q5SYE7 1610 aa28.29■■■□□ 2.12
CDKN3-209ENST00000556102 PPLO60437 1756 aa28.28■■■□□ 2.12
CDKN3-209ENST00000556102 PTCH1Q13635 1447 aa28.26■■■□□ 2.12
CDKN3-209ENST00000556102 MEX3CQ5U5Q3 659 aaKnown RBP28.24■■■□□ 2.11
CDKN3-209ENST00000556102 PRAG1Q86YV5 1406 aa28.23■■■□□ 2.11
CDKN3-209ENST00000556102 SETD5Q9C0A6 1442 aa28.23■■■□□ 2.11
CDKN3-209ENST00000556102 ROBO2Q9HCK4 1378 aa28.2■■■□□ 2.1
CDKN3-209ENST00000556102 FOXD1Q16676 465 aa28.19■■■□□ 2.1
CDKN3-209ENST00000556102 ZNF772Q68DY9 489 aaPredicted RBP28.18■■■□□ 2.1
CDKN3-209ENST00000556102 CCDC144AA2RUR9 1427 aa28.17■■■□□ 2.1
CDKN3-209ENST00000556102 C1orf167Q5SNV9 1468 aa28.16■■■□□ 2.1
CDKN3-209ENST00000556102 LRRC59Q96AG4 307 aaKnown RBP28.16■■■□□ 2.1
CDKN3-209ENST00000556102 NUTM2BA6NNL0 878 aaPredicted RBP28.14■■■□□ 2.1
CDKN3-209ENST00000556102 NUTM2EB1AL46 878 aaPredicted RBP28.14■■■□□ 2.1
CDKN3-209ENST00000556102 NUTM2AQ8IVF1 878 aaPredicted RBP28.14■■■□□ 2.1
CDKN3-209ENST00000556102 LAMC1P11047 1609 aa28.13■■■□□ 2.09
CDKN3-209ENST00000556102 DDX17Q92841 729 aaKnown RBP28.12■■■□□ 2.09
CDKN3-209ENST00000556102 MPHOSPH9Q99550 1183 aa28.12■■■□□ 2.09
CDKN3-209ENST00000556102 IFT172Q9UG01 1749 aa28.12■■■□□ 2.09
CDKN3-209ENST00000556102 SPATA31E1Q6ZUB1 1445 aa28.11■■■□□ 2.09
CDKN3-209ENST00000556102 PNPLA6Q8IY17 1366 aa28.1■■■□□ 2.09
CDKN3-209ENST00000556102 ADGRF5Q8IZF2 1346 aa28.09■■■□□ 2.09
CDKN3-209ENST00000556102 RGL3Q3MIN7 710 aa28.07■■■□□ 2.08
CDKN3-209ENST00000556102 ANKRD30BQ9BXX2 1392 aa28.07■■■□□ 2.08
CDKN3-209ENST00000556102 CDC42BPGQ6DT37 1551 aa28.05■■■□□ 2.08
CDKN3-209ENST00000556102 ORAI2Q96SN7 254 aa28.05■■■□□ 2.08
CDKN3-209ENST00000556102 AFF2P51816 1311 aa28.04■■■□□ 2.08
CDKN3-209ENST00000556102 ACIN1Q9UKV3 1341 aaKnown RBP28.04■■■□□ 2.08
CDKN3-209ENST00000556102 TECPR2O15040 1411 aa28.02■■■□□ 2.08
CDKN3-209ENST00000556102 SOS2Q07890 1332 aaPredicted RBP28.02■■■□□ 2.08
CDKN3-209ENST00000556102 RXRBP28702 533 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms