RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 SLC52A1Q9NWF4 448 aa22.39■■□□□ 1.17
CHMP4BP1-201ENST00000556017 RGS17Q9UGC6 210 aaPredicted RBP22.39■■□□□ 1.17
CHMP4BP1-201ENST00000556017 CHD2O14647 1828 aaKnown RBP22.38■■□□□ 1.17
CHMP4BP1-201ENST00000556017 FAM50AQ14320 339 aaKnown RBP22.38■■□□□ 1.17
CHMP4BP1-201ENST00000556017 E9PCH4 1651 aa22.38■■□□□ 1.17
CHMP4BP1-201ENST00000556017 ROBO1Q9Y6N7 1651 aa22.37■■□□□ 1.17
CHMP4BP1-201ENST00000556017 RBM33Q96EV2 1170 aaKnown RBP22.37■■□□□ 1.17
CHMP4BP1-201ENST00000556017 NKTRP30414 1462 aaKnown RBP22.36■■□□□ 1.17
CHMP4BP1-201ENST00000556017 IQGAP3Q86VI3 1631 aa22.32■■□□□ 1.16
CHMP4BP1-201ENST00000556017 PLEKHG1Q9ULL1 1385 aa22.32■■□□□ 1.16
CHMP4BP1-201ENST00000556017 RIMS2Q9UQ26 1411 aa22.31■■□□□ 1.16
CHMP4BP1-201ENST00000556017 PROSER2Q86WR7 435 aaPredicted RBP22.31■■□□□ 1.16
CHMP4BP1-201ENST00000556017 PHF23Q9BUL5 403 aaPredicted RBP22.31■■□□□ 1.16
CHMP4BP1-201ENST00000556017 ROCK1Q13464 1354 aa22.28■■□□□ 1.16
CHMP4BP1-201ENST00000556017 ADAMTS13Q76LX8 1427 aa22.28■■□□□ 1.16
CHMP4BP1-201ENST00000556017 TBX22Q9Y458 520 aa22.22■■□□□ 1.15
CHMP4BP1-201ENST00000556017 PHLPP1O60346 1717 aa22.21■■□□□ 1.15
CHMP4BP1-201ENST00000556017 MSH6P52701 1360 aa22.21■■□□□ 1.15
CHMP4BP1-201ENST00000556017 COL16A1Q07092 1604 aaPredicted RBP22.2■■□□□ 1.15
CHMP4BP1-201ENST00000556017 SLAIN2Q9P270 581 aa22.2■■□□□ 1.14
CHMP4BP1-201ENST00000556017 DIP2AQ14689 1571 aa22.2■■□□□ 1.14
CHMP4BP1-201ENST00000556017 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.2■■□□□ 1.14
CHMP4BP1-201ENST00000556017 POTEAQ6S8J7 498 aa22.19■■□□□ 1.14
CHMP4BP1-201ENST00000556017 BCANQ96GW7 911 aa22.19■■□□□ 1.14
CHMP4BP1-201ENST00000556017 NRXN3Q9Y4C0 1643 aa22.19■■□□□ 1.14
CHMP4BP1-201ENST00000556017 NUTM2DQ5VT03 806 aaPredicted RBP22.18■■□□□ 1.14
CHMP4BP1-201ENST00000556017 PTPRUQ92729 1446 aa22.17■■□□□ 1.14
CHMP4BP1-201ENST00000556017 NCOA3Q9Y6Q9 1424 aa22.17■■□□□ 1.14
CHMP4BP1-201ENST00000556017 NUP155O75694 1391 aa22.16■■□□□ 1.14
CHMP4BP1-201ENST00000556017 PPP1R15AO75807 674 aaPredicted RBP22.16■■□□□ 1.14
CHMP4BP1-201ENST00000556017 SPHKAPQ2M3C7 1700 aa22.15■■□□□ 1.14
CHMP4BP1-201ENST00000556017 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.15■■□□□ 1.14
CHMP4BP1-201ENST00000556017 CHGAP10645 457 aaKnown RBP22.14■■□□□ 1.13
CHMP4BP1-201ENST00000556017 HDGFP51858 240 aaKnown RBP22.14■■□□□ 1.13
CHMP4BP1-201ENST00000556017 PIK3R4Q99570 1358 aa22.13■■□□□ 1.13
CHMP4BP1-201ENST00000556017 XRN1Q8IZH2 1706 aaKnown RBP22.13■■□□□ 1.13
CHMP4BP1-201ENST00000556017 TRPM2O94759 1503 aa22.11■■□□□ 1.13
CHMP4BP1-201ENST00000556017 AHDC1Q5TGY3 1603 aaPredicted RBP22.1■■□□□ 1.13
CHMP4BP1-201ENST00000556017 PPARGC1BQ86YN6 1023 aaKnown RBP22.1■■□□□ 1.13
CHMP4BP1-201ENST00000556017 SETBP1Q9Y6X0 1596 aa22.1■■□□□ 1.13
CHMP4BP1-201ENST00000556017 JCADQ9P266 1359 aa22.1■■□□□ 1.13
CHMP4BP1-201ENST00000556017 LRP6O75581 1613 aa22.09■■□□□ 1.13
CHMP4BP1-201ENST00000556017 ITGAEP38570 1179 aa22.09■■□□□ 1.13
CHMP4BP1-201ENST00000556017 SETD1AO15047 1707 aaKnown RBP22.07■■□□□ 1.12
CHMP4BP1-201ENST00000556017 CLTCL1P53675 1640 aa22.06■■□□□ 1.12
CHMP4BP1-201ENST00000556017 C19orf44Q9H6X5 657 aa22.06■■□□□ 1.12
CHMP4BP1-201ENST00000556017 AMOTL2Q9Y2J4 779 aa22.06■■□□□ 1.12
CHMP4BP1-201ENST00000556017 SHPRHQ149N8 1683 aa22.06■■□□□ 1.12
CHMP4BP1-201ENST00000556017 NEXMIFQ5QGS0 1516 aa22.04■■□□□ 1.12
CHMP4BP1-201ENST00000556017 CADPS2Q86UW7 1296 aa22.03■■□□□ 1.12
CHMP4BP1-201ENST00000556017 METP08581 1390 aa22.02■■□□□ 1.12
CHMP4BP1-201ENST00000556017 RRBP1Q9P2E9 1410 aaKnown RBP22.01■■□□□ 1.11
CHMP4BP1-201ENST00000556017 DCCP43146 1447 aa22■■□□□ 1.11
CHMP4BP1-201ENST00000556017 NAIPQ13075 1403 aa22■■□□□ 1.11
CHMP4BP1-201ENST00000556017 BRINP3Q76B58 766 aa22■■□□□ 1.11
CHMP4BP1-201ENST00000556017 C14orf37Q86TY3 774 aa21.99■■□□□ 1.11
CHMP4BP1-201ENST00000556017 NHSL1Q5SYE7 1610 aa21.98■■□□□ 1.11
CHMP4BP1-201ENST00000556017 MST1RQ04912 1400 aa21.98■■□□□ 1.11
CHMP4BP1-201ENST00000556017 NALCNQ8IZF0 1738 aa21.98■■□□□ 1.11
CHMP4BP1-201ENST00000556017 ATF3P18847 181 aa21.98■■□□□ 1.11
CHMP4BP1-201ENST00000556017 ASXL1Q8IXJ9 1541 aa21.97■■□□□ 1.11
CHMP4BP1-201ENST00000556017 SPATA31A6Q5VVP1 1343 aa21.97■■□□□ 1.11
CHMP4BP1-201ENST00000556017 KIF1BO60333 1816 aa21.96■■□□□ 1.11
CHMP4BP1-201ENST00000556017 SETD5Q9C0A6 1442 aa21.92■■□□□ 1.1
CHMP4BP1-201ENST00000556017 ADGRL3Q9HAR2 1447 aa21.92■■□□□ 1.1
CHMP4BP1-201ENST00000556017 ZNF326Q5BKZ1 582 aaKnown RBP21.91■■□□□ 1.1
CHMP4BP1-201ENST00000556017 LAMC1P11047 1609 aa21.88■■□□□ 1.09
CHMP4BP1-201ENST00000556017 DDX17Q92841 729 aaKnown RBP21.87■■□□□ 1.09
CHMP4BP1-201ENST00000556017 HFM1A2PYH4 1435 aa21.87■■□□□ 1.09
CHMP4BP1-201ENST00000556017 PPLO60437 1756 aa21.87■■□□□ 1.09
CHMP4BP1-201ENST00000556017 PRAG1Q86YV5 1406 aa21.86■■□□□ 1.09
CHMP4BP1-201ENST00000556017 PTCH1Q13635 1447 aa21.84■■□□□ 1.09
CHMP4BP1-201ENST00000556017 ROBO2Q9HCK4 1378 aa21.84■■□□□ 1.09
CHMP4BP1-201ENST00000556017 ZNF772Q68DY9 489 aaPredicted RBP21.83■■□□□ 1.09
CHMP4BP1-201ENST00000556017 C1orf167Q5SNV9 1468 aa21.83■■□□□ 1.08
CHMP4BP1-201ENST00000556017 MEX3CQ5U5Q3 659 aaKnown RBP21.82■■□□□ 1.08
CHMP4BP1-201ENST00000556017 PNPLA6Q8IY17 1366 aa21.82■■□□□ 1.08
CHMP4BP1-201ENST00000556017 NUTM2BA6NNL0 878 aaPredicted RBP21.8■■□□□ 1.08
CHMP4BP1-201ENST00000556017 NUTM2EB1AL46 878 aaPredicted RBP21.8■■□□□ 1.08
CHMP4BP1-201ENST00000556017 NUTM2AQ8IVF1 878 aaPredicted RBP21.8■■□□□ 1.08
CHMP4BP1-201ENST00000556017 UPF1Q92900 1129 aaKnown RBP eCLIP21.78■■□□□ 1.08
CHMP4BP1-201ENST00000556017 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
CHMP4BP1-201ENST00000556017 LRRC59Q96AG4 307 aaKnown RBP21.78■■□□□ 1.08
CHMP4BP1-201ENST00000556017 AFF2P51816 1311 aa21.78■■□□□ 1.08
CHMP4BP1-201ENST00000556017 CDK12Q9NYV4 1490 aaPredicted RBP21.77■■□□□ 1.08
CHMP4BP1-201ENST00000556017 VGFO15240 615 aaPredicted RBP21.76■■□□□ 1.07
CHMP4BP1-201ENST00000556017 IFT172Q9UG01 1749 aa21.75■■□□□ 1.07
CHMP4BP1-201ENST00000556017 ORAI2Q96SN7 254 aa21.75■■□□□ 1.07
CHMP4BP1-201ENST00000556017 RPGRIP1LQ68CZ1 1315 aa21.75■■□□□ 1.07
CHMP4BP1-201ENST00000556017 RXRBP28702 533 aa21.74■■□□□ 1.07
CHMP4BP1-201ENST00000556017 SLC4A1APQ9BWU0 796 aaKnown RBP21.74■■□□□ 1.07
CHMP4BP1-201ENST00000556017 SOS2Q07890 1332 aaPredicted RBP21.74■■□□□ 1.07
CHMP4BP1-201ENST00000556017 FOXD1Q16676 465 aa21.73■■□□□ 1.07
CHMP4BP1-201ENST00000556017 SPATA31E1Q6ZUB1 1445 aa21.72■■□□□ 1.07
CHMP4BP1-201ENST00000556017 COL22A1Q8NFW1 1626 aaPredicted RBP21.7■■□□□ 1.06
CHMP4BP1-201ENST00000556017 RGS12O14924 1447 aa21.7■■□□□ 1.06
CHMP4BP1-201ENST00000556017 CDC42BPGQ6DT37 1551 aa21.7■■□□□ 1.06
CHMP4BP1-201ENST00000556017 C8orf37Q96NL8 207 aa21.69■■□□□ 1.06
CHMP4BP1-201ENST00000556017 ADGRF5Q8IZF2 1346 aa21.69■■□□□ 1.06
CHMP4BP1-201ENST00000556017 TECPR2O15040 1411 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 1666.7 ms