RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 PLEKHG1Q9ULL1 1385 aa19.39■□□□□ 0.69
HNRNPC-221ENST00000555883 NWD1Q149M9 1564 aa19.39■□□□□ 0.69
HNRNPC-221ENST00000555883 NKTRP30414 1462 aaKnown RBP19.38■□□□□ 0.69
HNRNPC-221ENST00000555883 RIMS2Q9UQ26 1411 aa19.37■□□□□ 0.69
HNRNPC-221ENST00000555883 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.36■□□□□ 0.69
HNRNPC-221ENST00000555883 XIRP1Q702N8 1843 aaKnown RBP19.35■□□□□ 0.69
HNRNPC-221ENST00000555883 ITGAEP38570 1179 aa19.35■□□□□ 0.69
HNRNPC-221ENST00000555883 ILDR2Q71H61 639 aa19.35■□□□□ 0.69
HNRNPC-221ENST00000555883 SLC26A8Q96RN1 970 aa19.35■□□□□ 0.69
HNRNPC-221ENST00000555883 TMEM94Q12767 1356 aa19.33■□□□□ 0.69
HNRNPC-221ENST00000555883 PPARGC1BQ86YN6 1023 aaKnown RBP19.33■□□□□ 0.68
HNRNPC-221ENST00000555883 MYO5BQ9ULV0 1848 aa19.32■□□□□ 0.68
HNRNPC-221ENST00000555883 DIP2AQ14689 1571 aa19.32■□□□□ 0.68
HNRNPC-221ENST00000555883 PPP1R15AO75807 674 aaPredicted RBP19.31■□□□□ 0.68
HNRNPC-221ENST00000555883 TBX22Q9Y458 520 aa19.31■□□□□ 0.68
HNRNPC-221ENST00000555883 FAM135BQ49AJ0 1406 aa19.31■□□□□ 0.68
HNRNPC-221ENST00000555883 NAIPQ13075 1403 aa19.3■□□□□ 0.68
HNRNPC-221ENST00000555883 MED1Q15648 1581 aaPredicted RBP19.3■□□□□ 0.68
HNRNPC-221ENST00000555883 PIK3R4Q99570 1358 aa19.3■□□□□ 0.68
HNRNPC-221ENST00000555883 NCOA3Q9Y6Q9 1424 aa19.29■□□□□ 0.68
HNRNPC-221ENST00000555883 SOCS7O14512 581 aa19.29■□□□□ 0.68
HNRNPC-221ENST00000555883 PROSER2Q86WR7 435 aaPredicted RBP19.28■□□□□ 0.68
HNRNPC-221ENST00000555883 BCANQ96GW7 911 aa19.28■□□□□ 0.68
HNRNPC-221ENST00000555883 ADAMTS13Q76LX8 1427 aa19.27■□□□□ 0.68
HNRNPC-221ENST00000555883 CHD2O14647 1828 aaKnown RBP19.27■□□□□ 0.68
HNRNPC-221ENST00000555883 HFM1A2PYH4 1435 aa19.26■□□□□ 0.67
HNRNPC-221ENST00000555883 SPHKAPQ2M3C7 1700 aa19.26■□□□□ 0.67
HNRNPC-221ENST00000555883 CHGAP10645 457 aaKnown RBP19.26■□□□□ 0.67
HNRNPC-221ENST00000555883 MSH6P52701 1360 aa19.24■□□□□ 0.67
HNRNPC-221ENST00000555883 TRPM2O94759 1503 aa19.23■□□□□ 0.67
HNRNPC-221ENST00000555883 SETBP1Q9Y6X0 1596 aa19.21■□□□□ 0.67
HNRNPC-221ENST00000555883 ROBO1Q9Y6N7 1651 aa19.18■□□□□ 0.66
HNRNPC-221ENST00000555883 NUTM2DQ5VT03 806 aaPredicted RBP19.17■□□□□ 0.66
HNRNPC-221ENST00000555883 RBM33Q96EV2 1170 aaKnown RBP19.17■□□□□ 0.66
HNRNPC-221ENST00000555883 CLTCL1P53675 1640 aa19.17■□□□□ 0.66
HNRNPC-221ENST00000555883 NRXN3Q9Y4C0 1643 aa19.16■□□□□ 0.66
HNRNPC-221ENST00000555883 SLAIN2Q9P270 581 aa19.16■□□□□ 0.66
HNRNPC-221ENST00000555883 NEXMIFQ5QGS0 1516 aa19.15■□□□□ 0.66
HNRNPC-221ENST00000555883 C19orf44Q9H6X5 657 aa19.14■□□□□ 0.65
HNRNPC-221ENST00000555883 ZNF326Q5BKZ1 582 aaKnown RBP19.13■□□□□ 0.65
HNRNPC-221ENST00000555883 CADPS2Q86UW7 1296 aa19.13■□□□□ 0.65
HNRNPC-221ENST00000555883 DCCP43146 1447 aa19.13■□□□□ 0.65
HNRNPC-221ENST00000555883 PTPRUQ92729 1446 aa19.13■□□□□ 0.65
HNRNPC-221ENST00000555883 XRN1Q8IZH2 1706 aaKnown RBP19.12■□□□□ 0.65
HNRNPC-221ENST00000555883 AMOTL2Q9Y2J4 779 aa19.12■□□□□ 0.65
HNRNPC-221ENST00000555883 TRIM52Q96A61 297 aa19.1■□□□□ 0.65
HNRNPC-221ENST00000555883 SLC4A1APQ9BWU0 796 aaKnown RBP19.1■□□□□ 0.65
HNRNPC-221ENST00000555883 KIF1BO60333 1816 aa19.09■□□□□ 0.65
HNRNPC-221ENST00000555883 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.09■□□□□ 0.65
HNRNPC-221ENST00000555883 RPGRIP1LQ68CZ1 1315 aa19.08■□□□□ 0.65
HNRNPC-221ENST00000555883 ACIN1Q9UKV3 1341 aaKnown RBP19.08■□□□□ 0.65
HNRNPC-221ENST00000555883 C14orf37Q86TY3 774 aa19.08■□□□□ 0.64
HNRNPC-221ENST00000555883 METP08581 1390 aa19.07■□□□□ 0.64
HNRNPC-221ENST00000555883 ATF3P18847 181 aa19.07■□□□□ 0.64
HNRNPC-221ENST00000555883 VGFO15240 615 aaPredicted RBP19.06■□□□□ 0.64
HNRNPC-221ENST00000555883 PRAG1Q86YV5 1406 aa19.06■□□□□ 0.64
HNRNPC-221ENST00000555883 JCADQ9P266 1359 aa19.06■□□□□ 0.64
HNRNPC-221ENST00000555883 PHLPP1O60346 1717 aa19.05■□□□□ 0.64
HNRNPC-221ENST00000555883 AHDC1Q5TGY3 1603 aaPredicted RBP19.05■□□□□ 0.64
HNRNPC-221ENST00000555883 COL16A1Q07092 1604 aaPredicted RBP19.04■□□□□ 0.64
HNRNPC-221ENST00000555883 PTCH1Q13635 1447 aa19.02■□□□□ 0.64
HNRNPC-221ENST00000555883 RGS17Q9UGC6 210 aaPredicted RBP19.02■□□□□ 0.64
HNRNPC-221ENST00000555883 ADGRL3Q9HAR2 1447 aa19.01■□□□□ 0.63
HNRNPC-221ENST00000555883 SETD1AO15047 1707 aaKnown RBP19■□□□□ 0.63
HNRNPC-221ENST00000555883 CCDC144AA2RUR9 1427 aa19■□□□□ 0.63
HNRNPC-221ENST00000555883 BRINP3Q76B58 766 aa18.99■□□□□ 0.63
HNRNPC-221ENST00000555883 MST1RQ04912 1400 aa18.99■□□□□ 0.63
HNRNPC-221ENST00000555883 SPATA31A6Q5VVP1 1343 aa18.99■□□□□ 0.63
HNRNPC-221ENST00000555883 PPLO60437 1756 aa18.98■□□□□ 0.63
HNRNPC-221ENST00000555883 MPHOSPH9Q99550 1183 aa18.97■□□□□ 0.63
HNRNPC-221ENST00000555883 ASXL1Q8IXJ9 1541 aa18.96■□□□□ 0.63
HNRNPC-221ENST00000555883 SPATA31E1Q6ZUB1 1445 aa18.96■□□□□ 0.63
HNRNPC-221ENST00000555883 SHPRHQ149N8 1683 aa18.95■□□□□ 0.62
HNRNPC-221ENST00000555883 NALCNQ8IZF0 1738 aa18.94■□□□□ 0.62
HNRNPC-221ENST00000555883 ANKRD30BQ9BXX2 1392 aa18.93■□□□□ 0.62
HNRNPC-221ENST00000555883 SETD5Q9C0A6 1442 aa18.93■□□□□ 0.62
HNRNPC-221ENST00000555883 FOXD1Q16676 465 aa18.93■□□□□ 0.62
HNRNPC-221ENST00000555883 ROBO2Q9HCK4 1378 aa18.93■□□□□ 0.62
HNRNPC-221ENST00000555883 NHSL1Q5SYE7 1610 aa18.92■□□□□ 0.62
HNRNPC-221ENST00000555883 LRP6O75581 1613 aa18.89■□□□□ 0.62
HNRNPC-221ENST00000555883 IFT172Q9UG01 1749 aa18.89■□□□□ 0.61
HNRNPC-221ENST00000555883 POTEAQ6S8J7 498 aa18.89■□□□□ 0.61
HNRNPC-221ENST00000555883 TECPR2O15040 1411 aa18.89■□□□□ 0.61
HNRNPC-221ENST00000555883 C1orf167Q5SNV9 1468 aa18.89■□□□□ 0.61
HNRNPC-221ENST00000555883 LAMC1P11047 1609 aa18.89■□□□□ 0.61
HNRNPC-221ENST00000555883 PIK3C2GO75747 1445 aa18.87■□□□□ 0.61
HNRNPC-221ENST00000555883 ADGRF5Q8IZF2 1346 aa18.87■□□□□ 0.61
HNRNPC-221ENST00000555883 LRRC59Q96AG4 307 aaKnown RBP18.87■□□□□ 0.61
HNRNPC-221ENST00000555883 CDC42BPGQ6DT37 1551 aa18.85■□□□□ 0.61
HNRNPC-221ENST00000555883 RGL3Q3MIN7 710 aa18.84■□□□□ 0.61
HNRNPC-221ENST00000555883 LRPPRCP42704 1394 aaKnown RBP18.83■□□□□ 0.61
HNRNPC-221ENST00000555883 ABCC11Q96J66 1382 aa18.83■□□□□ 0.61
HNRNPC-221ENST00000555883 RAB3GAP2Q9H2M9 1393 aa18.83■□□□□ 0.61
HNRNPC-221ENST00000555883 ZNF772Q68DY9 489 aaPredicted RBP18.83■□□□□ 0.6
HNRNPC-221ENST00000555883 NRXN1Q9ULB1 1477 aa18.83■□□□□ 0.6
HNRNPC-221ENST00000555883 MYOM2P54296 1465 aa18.82■□□□□ 0.6
HNRNPC-221ENST00000555883 KNDC1Q76NI1 1749 aa18.81■□□□□ 0.6
HNRNPC-221ENST00000555883 MEX3CQ5U5Q3 659 aaKnown RBP18.81■□□□□ 0.6
HNRNPC-221ENST00000555883 PNPLA6Q8IY17 1366 aa18.81■□□□□ 0.6
HNRNPC-221ENST00000555883 SOS2Q07890 1332 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms