RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 ALKQ9UM73 1620 aa9.89□□□□□ -0.83
PSEN1-214ENST00000555867 AGLP35573 1532 aa9.89□□□□□ -0.83
PSEN1-214ENST00000555867 CDK13Q14004 1512 aaKnown RBP9.89□□□□□ -0.83
PSEN1-214ENST00000555867 NPATQ14207 1427 aa9.89□□□□□ -0.83
PSEN1-214ENST00000555867 ABCA6Q8N139 1617 aa9.89□□□□□ -0.83
PSEN1-214ENST00000555867 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
PSEN1-214ENST00000555867 REREQ9P2R6 1566 aa9.88□□□□□ -0.83
PSEN1-214ENST00000555867 MARVELD3Q96A59 401 aa9.88□□□□□ -0.83
PSEN1-214ENST00000555867 PLA2R1Q13018 1463 aa9.87□□□□□ -0.83
PSEN1-214ENST00000555867 CIZ1Q9ULV3 898 aaPredicted RBP9.87□□□□□ -0.83
PSEN1-214ENST00000555867 CNTLNQ9NXG0 1405 aa9.87□□□□□ -0.83
PSEN1-214ENST00000555867 MLH3Q9UHC1 1453 aa9.85□□□□□ -0.83
PSEN1-214ENST00000555867 POTEAQ6S8J7 498 aa9.85□□□□□ -0.83
PSEN1-214ENST00000555867 IFNLR1Q8IU57 520 aaPredicted RBP9.85□□□□□ -0.83
PSEN1-214ENST00000555867 MYO5CQ9NQX4 1742 aa9.85□□□□□ -0.83
PSEN1-214ENST00000555867 SUPT6HQ7KZ85 1726 aaKnown RBP9.83□□□□□ -0.84
PSEN1-214ENST00000555867 EMP3P54852 163 aa9.83□□□□□ -0.84
PSEN1-214ENST00000555867 MMRN1Q13201 1228 aa9.83□□□□□ -0.84
PSEN1-214ENST00000555867 SPNS2Q8IVW8 549 aa9.83□□□□□ -0.84
PSEN1-214ENST00000555867 CABP2Q9NPB3 220 aa9.83□□□□□ -0.84
PSEN1-214ENST00000555867 SHANK2Q9UPX8 1470 aa9.83□□□□□ -0.84
PSEN1-214ENST00000555867 CEP170BQ9Y4F5 1589 aaPredicted RBP9.83□□□□□ -0.84
PSEN1-214ENST00000555867 ZNF142P52746 1687 aaPredicted RBP9.83□□□□□ -0.84
PSEN1-214ENST00000555867 PTPRKQ15262 1439 aa9.82□□□□□ -0.84
PSEN1-214ENST00000555867 MAP3K1Q13233 1512 aa9.82□□□□□ -0.84
PSEN1-214ENST00000555867 KIF14Q15058 1648 aa9.82□□□□□ -0.84
PSEN1-214ENST00000555867 G3V3G9 751 aa9.82□□□□□ -0.84
PSEN1-214ENST00000555867 KIDINS220Q9ULH0 1771 aa9.82□□□□□ -0.84
PSEN1-214ENST00000555867 MYO3AQ8NEV4 1616 aa9.82□□□□□ -0.84
PSEN1-214ENST00000555867 CPS1P31327 1500 aa9.82□□□□□ -0.84
PSEN1-214ENST00000555867 ARHGAP5Q13017 1502 aa9.82□□□□□ -0.84
PSEN1-214ENST00000555867 MROH2AA6NES4 1674 aa9.81□□□□□ -0.84
PSEN1-214ENST00000555867 ARHGAP35Q9NRY4 1499 aa9.81□□□□□ -0.84
PSEN1-214ENST00000555867 DPY19L2Q6NUT2 758 aa9.8□□□□□ -0.84
PSEN1-214ENST00000555867 NEURL4Q96JN8 1562 aa9.8□□□□□ -0.84
PSEN1-214ENST00000555867 BOLA1Q9Y3E2 137 aa9.79□□□□□ -0.84
PSEN1-214ENST00000555867 VWDEQ8N2E2 1590 aa9.79□□□□□ -0.84
PSEN1-214ENST00000555867 CDC42BPBQ9Y5S2 1711 aa9.79□□□□□ -0.84
PSEN1-214ENST00000555867 CLTCQ00610 1675 aaKnown RBP9.78□□□□□ -0.84
PSEN1-214ENST00000555867 ATP1B4Q9UN42 357 aaPredicted RBP9.78□□□□□ -0.84
PSEN1-214ENST00000555867 SRCAPQ6ZRS2 3230 aa9.78□□□□□ -0.84
PSEN1-214ENST00000555867 DNMT1P26358 1616 aaKnown RBP9.78□□□□□ -0.84
PSEN1-214ENST00000555867 A2ML1A8K2U0 1454 aa9.77□□□□□ -0.85
PSEN1-214ENST00000555867 TROQ12816 1431 aaPredicted RBP9.76□□□□□ -0.85
PSEN1-214ENST00000555867 HS3ST6Q96QI5 342 aa9.76□□□□□ -0.85
PSEN1-214ENST00000555867 ABCC1P33527 1531 aa9.76□□□□□ -0.85
PSEN1-214ENST00000555867 SETD1AO15047 1707 aaKnown RBP9.76□□□□□ -0.85
PSEN1-214ENST00000555867 TIAM1Q13009 1591 aa9.75□□□□□ -0.85
PSEN1-214ENST00000555867 STRCP1A6NGW2 1772 aa9.75□□□□□ -0.85
PSEN1-214ENST00000555867 FAM205CA6NFA0 338 aa9.75□□□□□ -0.85
PSEN1-214ENST00000555867 GGT6Q6P531 493 aa9.75□□□□□ -0.85
PSEN1-214ENST00000555867 PPARGC1BQ86YN6 1023 aaKnown RBP9.75□□□□□ -0.85
PSEN1-214ENST00000555867 ITSN2Q9NZM3 1697 aa9.74□□□□□ -0.85
PSEN1-214ENST00000555867 POLR1AO95602 1720 aaPredicted RBP9.74□□□□□ -0.85
PSEN1-214ENST00000555867 FBXO31Q5XUX0 539 aaPredicted RBP9.74□□□□□ -0.85
PSEN1-214ENST00000555867 CDK11AQ9UQ88 783 aaPredicted RBP9.74□□□□□ -0.85
PSEN1-214ENST00000555867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.74□□□□□ -0.85
PSEN1-214ENST00000555867 FYCO1Q9BQS8 1478 aa9.73□□□□□ -0.85
PSEN1-214ENST00000555867 LRRC7Q96NW7 1537 aa9.73□□□□□ -0.85
PSEN1-214ENST00000555867 ANKLE2Q86XL3 938 aa9.73□□□□□ -0.85
PSEN1-214ENST00000555867 SAMD9LQ8IVG5 1584 aa9.72□□□□□ -0.85
PSEN1-214ENST00000555867 UPF1Q92900 1129 aaKnown RBP eCLIP9.72□□□□□ -0.85
PSEN1-214ENST00000555867 POTEB3A0JP26 581 aa9.71□□□□□ -0.86
PSEN1-214ENST00000555867 HNRNPMP52272 730 aaKnown RBP eCLIP9.71□□□□□ -0.86
PSEN1-214ENST00000555867 POTEBQ6S5H4 581 aa9.71□□□□□ -0.86
PSEN1-214ENST00000555867 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.86
PSEN1-214ENST00000555867 KRTAP3-2Q9BYR7 98 aa9.71□□□□□ -0.86
PSEN1-214ENST00000555867 SPAG9O60271 1321 aaKnown RBP9.71□□□□□ -0.86
PSEN1-214ENST00000555867 NPHP4O75161 1426 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-214ENST00000555867 FMN1Q68DA7 1419 aa9.71□□□□□ -0.86
PSEN1-214ENST00000555867 HOXB3P14651 431 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-214ENST00000555867 RRBP1Q9P2E9 1410 aaKnown RBP9.7□□□□□ -0.86
PSEN1-214ENST00000555867 PREX2Q70Z35 1606 aa9.7□□□□□ -0.86
PSEN1-214ENST00000555867 MED14O60244 1454 aa9.69□□□□□ -0.86
PSEN1-214ENST00000555867 PLXNC1O60486 1568 aa9.69□□□□□ -0.86
PSEN1-214ENST00000555867 A2MP01023 1474 aa9.69□□□□□ -0.86
PSEN1-214ENST00000555867 ZNF710Q8N1W2 664 aa9.69□□□□□ -0.86
PSEN1-214ENST00000555867 EFCAB3Q8N7B9 438 aa9.69□□□□□ -0.86
PSEN1-214ENST00000555867 CCER1Q8TC90 406 aaPredicted RBP9.69□□□□□ -0.86
PSEN1-214ENST00000555867 TNRQ92752 1358 aa9.69□□□□□ -0.86
PSEN1-214ENST00000555867 ZNF777Q9ULD5 760 aaPredicted RBP9.69□□□□□ -0.86
PSEN1-214ENST00000555867 LRRIQ1Q96JM4 1722 aa9.68□□□□□ -0.86
PSEN1-214ENST00000555867 RNF17Q9BXT8 1623 aaKnown RBP9.68□□□□□ -0.86
PSEN1-214ENST00000555867 CASKIN1Q8WXD9 1431 aa9.68□□□□□ -0.86
PSEN1-214ENST00000555867 DOK7Q18PE1 504 aa9.68□□□□□ -0.86
PSEN1-214ENST00000555867 HOXB1P14653 301 aaPredicted RBP9.67□□□□□ -0.86
PSEN1-214ENST00000555867 THEMISQ8N1K5 641 aaPredicted RBP9.67□□□□□ -0.86
PSEN1-214ENST00000555867 SYCP2Q9BX26 1530 aa9.66□□□□□ -0.86
PSEN1-214ENST00000555867 CDC42BPAQ5VT25 1732 aa9.66□□□□□ -0.86
PSEN1-214ENST00000555867 ATP7AQ04656 1500 aa9.66□□□□□ -0.86
PSEN1-214ENST00000555867 LRRC9Q6ZRR7 1453 aa9.66□□□□□ -0.86
PSEN1-214ENST00000555867 XIRP1Q702N8 1843 aaKnown RBP9.66□□□□□ -0.86
PSEN1-214ENST00000555867 FAM135BQ49AJ0 1406 aa9.65□□□□□ -0.86
PSEN1-214ENST00000555867 IQGAP1P46940 1657 aa9.65□□□□□ -0.86
PSEN1-214ENST00000555867 DEPDC5O75140 1603 aa9.65□□□□□ -0.86
PSEN1-214ENST00000555867 RIMBP2O15034 1052 aa9.64□□□□□ -0.87
PSEN1-214ENST00000555867 MIA2Q96PC5 1412 aa9.64□□□□□ -0.87
PSEN1-214ENST00000555867 INO80Q9ULG1 1556 aaPredicted RBP9.63□□□□□ -0.87
PSEN1-214ENST00000555867 CLSPNQ9HAW4 1339 aa9.63□□□□□ -0.87
PSEN1-214ENST00000555867 TRIM52Q96A61 297 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms